CX070309
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX070309 vs. ExPASy Swiss-Prot
Match: RPAB4_HUMAN (DNA-directed RNA polymerases I, II, and III subunit RPABC4 OS=Homo sapiens GN=POLR2K PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 4.773e-13 Identity = 32/58 (55.17%), Postives = 44/58 (75.86%), Query Frame = -1 Query: 241 LETAMDPQP---EPVSYICGDCGMENTLKPGDVIQCRECGYRILYKKRTRRIVQYEAR 405 ++T D QP +P+ YICG+C EN +K D I+CRECGYRI+YKKRT+R+V ++AR Sbjct: 1 MDTQKDVQPPKQQPMIYICGECHTENEIKSRDPIRCRECGYRIMYKKRTKRLVVFDAR 58
BLAST of CX070309 vs. ExPASy Swiss-Prot
Match: RPAB4_BOVIN (DNA-directed RNA polymerases I, II, and III subunit RPABC4 OS=Bos taurus GN=POLR2K PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 4.773e-13 Identity = 32/58 (55.17%), Postives = 44/58 (75.86%), Query Frame = -1 Query: 241 LETAMDPQP---EPVSYICGDCGMENTLKPGDVIQCRECGYRILYKKRTRRIVQYEAR 405 ++T D QP +P+ YICG+C EN +K D I+CRECGYRI+YKKRT+R+V ++AR Sbjct: 1 MDTQKDVQPPKQQPMIYICGECHTENEIKSRDPIRCRECGYRIMYKKRTKRLVVFDAR 58
BLAST of CX070309 vs. ExPASy Swiss-Prot
Match: RPAB4_MOUSE (DNA-directed RNA polymerases I, II, and III subunit RPABC4 OS=Mus musculus GN=Polr2k PE=2 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 8.141e-13 Identity = 29/49 (59.18%), Postives = 40/49 (81.63%), Query Frame = -1 Query: 241 PQPEPVSYICGDCGMENTLKPGDVIQCRECGYRILYKKRTRRIVQYEAR 387 P+ +P+ YICG+C EN +K D I+CRECGYRI+YKKRT+R+V ++AR Sbjct: 10 PKQQPMIYICGECHTENEIKSRDPIRCRECGYRIMYKKRTKRLVVFDAR 58
BLAST of CX070309 vs. ExPASy Swiss-Prot
Match: RPAB4_SCHPO (DNA-directed RNA polymerases I, II, and III subunit RPABC4 OS=Schizosaccharomyces pombe GN=rpc10 PE=1 SV=2) HSP 1 Score: 71.2478 bits (173), Expect = 1.814e-12 Identity = 27/49 (55.10%), Postives = 40/49 (81.63%), Query Frame = -1 Query: 241 PQPEPVSYICGDCGMENTLKPGDVIQCRECGYRILYKKRTRRIVQYEAR 387 P+P + Y+C DCG NT++ +VI+CRECG+R++YK RT+R+VQ+EAR Sbjct: 15 PRPATMIYLCADCGARNTIQAKEVIRCRECGHRVMYKMRTKRMVQFEAR 63 The following BLAST results are available for this feature:
BLAST of CX070309 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX070309 ID=CX070309; Name=CX070309; organism=Citrus sinensis; type=EST; length=423bpback to top |