CX070295
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX070295 vs. ExPASy Swiss-Prot
Match: SYP52_ARATH (Syntaxin-52 OS=Arabidopsis thaliana GN=SYP52 PE=1 SV=1) HSP 1 Score: 320.857 bits (821), Expect = 5.429e-87 Identity = 158/212 (74.53%), Postives = 187/212 (88.21%), Query Frame = 1 Query: 100 MASASDSWIKEYNEAIKLADDINGMISERSSMPASGPESQRHASAIRRKITILGTRLDSLQSLLSKLPGKQPISEKEMNRRKDMLANLRSKVNQMASTLNMSNFANRDSLLGPEIKSADVMNRATGLDNQGLVGFQRQIMREQDEGLEKLEETVVSTKHIALAVNEELDLHTRLIDDLDQHVDVTDSRLRRVQKNLAILNKRTKGGCTCMCM 735 MAS+SD W++EYNEA+KL++DINGM+SER++ +GP++QR ASAIRRKITILGTRLDSLQSLL K+PGKQ +SEKEMNRRKDM+ NLRSK NQ+AS LNMSNFANRDSL G ++K D +NR +G+DNQG+V FQRQ+MREQDEGLEKLEETV+STKHIALAVNEEL L TRLIDDLD VD+TDSRLRRVQK+LA++NK K GC+CM M Sbjct: 1 MASSSDPWMREYNEALKLSEDINGMMSERNASGLTGPDAQRRASAIRRKITILGTRLDSLQSLLVKVPGKQHVSEKEMNRRKDMVGNLRSKTNQVASALNMSNFANRDSLFGTDLKPDDAINRVSGMDNQGIVVFQRQVMREQDEGLEKLEETVMSTKHIALAVNEELTLQTRLIDDLDYDVDITDSRLRRVQKSLALMNKSMKSGCSCMSM 212
BLAST of CX070295 vs. ExPASy Swiss-Prot
Match: SYP51_ARATH (Syntaxin-51 OS=Arabidopsis thaliana GN=SYP51 PE=1 SV=1) HSP 1 Score: 320.857 bits (821), Expect = 5.429e-87 Identity = 159/212 (75.00%), Postives = 189/212 (89.15%), Query Frame = 1 Query: 100 MASASDSWIKEYNEAIKLADDINGMISERSSMPASGPESQRHASAIRRKITILGTRLDSLQSLLSKLPGKQPISEKEMNRRKDMLANLRSKVNQMASTLNMSNFANRDSLLGPEIKSADVMNRATGLDNQGLVGFQRQIMREQDEGLEKLEETVVSTKHIALAVNEELDLHTRLIDDLDQHVDVTDSRLRRVQKNLAILNKRTKGGCTCMCM 735 MAS+SDSW++ YNEA+KL+++INGMISERSS +GP++QR ASAIRRKITI G +LDSLQSLL+++ GK PISEKEMNRRKDM+ NLRSK NQMA+ LNMSNFANRDSLLGP+IK D M+R TG+DNQG+VG+QRQ+MREQDEGLE+LE TV+STKHIALAV+EELDL TRLIDDLD HVDVTDSRLRRVQK+LA++NK + GC+CM M Sbjct: 1 MASSSDSWMRAYNEALKLSEEINGMISERSSSAVTGPDAQRRASAIRRKITIFGNKLDSLQSLLAEIHGK-PISEKEMNRRKDMVGNLRSKANQMANALNMSNFANRDSLLGPDIKPDDSMSRVTGMDNQGIVGYQRQVMREQDEGLEQLEGTVMSTKHIALAVSEELDLQTRLIDDLDYHVDVTDSRLRRVQKSLAVMNKNMRSGCSCMSM 211
BLAST of CX070295 vs. ExPASy Swiss-Prot
Match: STX8B_DICDI (Probable syntaxin-8B OS=Dictyostelium discoideum GN=syn8B PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 9.137e-18 Identity = 64/222 (28.83%), Postives = 111/222 (50.00%), Query Frame = 1 Query: 115 DSWIKEYNEAIKLADDINGMISERSSMPASGPES-QRHASA-IRRKITILGTRLDSLQSLLSKLPGKQPISEKEMNRRKDMLANLRSKVNQMASTLN--MSNFANRDSLLGPEIK-SADVMNRATG----------LDNQGLVGFQRQIMREQDEGLEKLEETVVSTKHIALAVNEELDLHTRLIDDLDQHVDVTDSRLRRVQKNLAILNKRTKGGCTCMCM 735 D W+ E++ +KL + + I E S + P Q++ A +R + + + LQ L+ + I EKE+ RRK+ + +L S NQ+ STL+ ++N + ++ L+G NR G DNQ L Q+ IMREQDE L+ L ++++ K++A A++ ELD H ++DD++ D RLR + + + + C +C+ Sbjct: 3 DYWLNEHDNIVKLINSLTADIKEYSIQQRNNPGIVQKNTPAKLRNGLVHITNEILRLQDSLT-YGNNRNIQEKELLRRKNKVESLISMKNQLNSTLDAAINNTSQKNELMGNNNGVGIGYSNRQFGKPKETEATKQFDNQQLFTNQQHIMREQDESLDLLSQSIMRQKNMAHAMSNELDQHNEMLDDVEIGTDAVSMRLRNANRRMETIKQNAGSTCMIVCI 223
BLAST of CX070295 vs. ExPASy Swiss-Prot
Match: STX8_RAT (Syntaxin-8 OS=Rattus norvegicus GN=Stx8 PE=1 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.783e-13 Identity = 54/215 (25.12%), Postives = 102/215 (47.44%), Query Frame = 1 Query: 109 ASDSWIKEYNEAIKLADDINGMISERSSMPASGPESQRHASAIRRKITILGTRLDSLQSLLSKLPGKQPISEKEMNRRKDMLANLRSKVNQMASTLNMSNFAN--------RDSLLGPEIKSA-------DVMNRATGLDNQGLVGFQRQIMREQDEGLEKLEETVVSTKHIALAVNEELDLHTRLIDDLDQHVDVTDSRLRRVQKNLAILNKRT 708 A D W Y+ ++A +I I ER+ G ++ + IR + L ++D L+ LL + + I++ E +RR+++L +L ++ L +++F N R SL+ E K + GL + Q++I++EQD GL+ L + K + + ELD +IDDL V+ TD +LR + + ++++++ Sbjct: 2 APDPWFSTYDSTCQIAQEIAEKIQERNQCERRGEKTPKLTLTIRTLLKNLKVKIDLLKDLLLRAVSTRQITQLEGDRRQNLLDDLVTR-----ERLLLASFKNEGSEPDLIRSSLMSEEAKRGTPNPWLCEEPEETRGLGFDEIRQQQQKIIQEQDAGLDALSSIISRQKQMGQEIGNELDEQNEIIDDLANLVENTDEKLRTEARRVTLVDRKS 211
BLAST of CX070295 vs. ExPASy Swiss-Prot
Match: STX8_MOUSE (Syntaxin-8 OS=Mus musculus GN=Stx8 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.783e-13 Identity = 54/215 (25.12%), Postives = 102/215 (47.44%), Query Frame = 1 Query: 109 ASDSWIKEYNEAIKLADDINGMISERSSMPASGPESQRHASAIRRKITILGTRLDSLQSLLSKLPGKQPISEKEMNRRKDMLANLRSKVNQMASTLNMSNFAN--------RDSLLGPEIKSA-------DVMNRATGLDNQGLVGFQRQIMREQDEGLEKLEETVVSTKHIALAVNEELDLHTRLIDDLDQHVDVTDSRLRRVQKNLAILNKRT 708 A D W Y+ ++A +I I ER+ G ++ + IR + L ++D L+ LL + + I++ E +RR+++L +L ++ L +++F N R SL+ E K + GL + Q++I++EQD GL+ L + K + + ELD +IDDL V+ TD +LR + + ++++++ Sbjct: 2 APDPWFSTYDSTCQIAQEIAEKIQERNQCERRGEKTPKLTLTIRTLLKNLKVKIDLLKDLLLRAVSTRQITQLEGDRRQNLLDDLVTR-----ERLLLASFKNEGAEPDLIRSSLMSEEAKRGTPNPWLCEEPEETRGLGFDEIRQQQQKIIQEQDAGLDALSSIISRQKQMGQEIGNELDEQNEIIDDLANLVENTDEKLRTEARRVTLVDRKS 211
BLAST of CX070295 vs. ExPASy Swiss-Prot
Match: STX8_HUMAN (Syntaxin-8 OS=Homo sapiens GN=STX8 PE=1 SV=2) HSP 1 Score: 71.2478 bits (173), Expect = 7.492e-12 Identity = 52/215 (24.19%), Postives = 100/215 (46.51%), Query Frame = 1 Query: 109 ASDSWIKEYNEAIKLADDINGMISERSSMPASGPESQRHASAIRRKITILGTRLDSLQSLLSKLPGKQPISEKEMNRRKDMLANLRSKVNQMASTLNMSNFAN--------RDSLLGPEIKSA-------DVMNRATGLDNQGLVGFQRQIMREQDEGLEKLEETVVSTKHIALAVNEELDLHTRLIDDLDQHVDVTDSRLRRVQKNLAILNKRT 708 A D W Y+ ++A +I I +R+ G ++ + IR + L ++ L+ LL + I++ E +RR+++L +L ++ L +++F N R SL+ E K + GL + Q++I++EQD GL+ L + K + + ELD +IDDL V+ TD +LR + + ++++++ Sbjct: 2 APDPWFSTYDSTCQIAQEIAEKIQQRNQYERKGEKAPKLTVTIRALLQNLKEKIALLKDLLLRAVSTHQITQLEGDRRQNLLDDLVTR-----ERLLLASFKNEGAEPDLIRSSLMSEEAKRGAPNPWLFEEPEETRGLGFDEIRQQQQKIIQEQDAGLDALSSIISRQKQMGQEIGNELDEQNEIIDDLANLVENTDEKLRNETRRVNMVDRKS 211
BLAST of CX070295 vs. ExPASy Swiss-Prot
Match: STX8_BOVIN (Syntaxin-8 OS=Bos taurus GN=STX8 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 8.284e-11 Identity = 52/217 (23.96%), Postives = 103/217 (47.47%), Query Frame = 1 Query: 109 ASDSWIKEYNEAIKLADDINGMISERSSMPASGPESQRHASAIRRKITILGTRLDSLQSLLSKLPGKQPISEKEMNRRKDMLANLRSKVNQMASTLNMSNFANRDSLLGPEIKSADVMNRAT--GLDNQGLV---------GF------QRQIMREQDEGLEKLEETVVSTKHIALAVNEELDLHTRLIDDLDQHVDVTDSRLRRVQKNLAILNKRT 708 A D W Y+ ++A +I I +R+ +G + + IR + L ++ L+ LL + I++ E +RR+++L +L ++ L +++F N + P++ + +M G N L+ GF Q++I++EQD GL+ L + K + + ELD +IDDL V+ TD +LR + + ++++++ Sbjct: 2 APDPWFSTYDSTCQIAQEIAEKIQQRNQYERNGENTTKLTVTIRALLQKLKEKIALLKDLLLRAVATHQITQLEGDRRQNLLDDLVTR-----ERLLLASFKNEGA--EPDLIRSSLMTGGAKRGAPNPWLLEEPEETRGLGFDEIRQQQQKIIQEQDAGLDALSSIISRQKQMGQEIGNELDEQNEIIDDLANLVENTDEKLRTETRRVNLVDRKS 211 The following BLAST results are available for this feature:
BLAST of CX070295 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX070295 ID=CX070295; Name=CX070295; organism=Citrus sinensis; type=EST; length=812bpback to top |