CX070148
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX070148 vs. ExPASy Swiss-Prot
Match: DBR1_ARATH (Lariat debranching enzyme OS=Arabidopsis thaliana GN=DBR1 PE=2 SV=1) HSP 1 Score: 218.779 bits (556), Expect = 3.018e-56 Identity = 110/180 (61.11%), Postives = 131/180 (72.78%), Query Frame = 1 Query: 4 TLGSEPAAQLLEKLKPSYWFSAHLHCKFAAVVQHGEDSPVTKFLALDKCLPRRKFLQVFEIESGQGPYEIQYDEEWLAITRTFNSVFPLTSQSANFGGVQHDMNDCRQWVRSRLQERGAKPFEFVRTVPCYDASQSLSIGAFAENPQNPQTESFLQFLELPNLFENALESREPTQSPATL 543 TLGS+PAA LLEKLKP YWFSAHLHCKFAA VQHG D VTKFLALDKCLP +KFLQ+ EIES GP+E+ YDEEWLAITR FNS+FPLT + N + + R+WVR +L+ER KPFEF RTVP Y+ SQ + + E PQNPQT S L+ L LP L +++ + E T PA+L Sbjct: 204 TLGSKPAALLLEKLKPQYWFSAHLHCKFAAAVQHGNDGSVTKFLALDKCLPGKKFLQIIEIESEPGPFEVLYDEEWLAITRKFNSIFPLTRRYTNV-STAGTIQESREWVRKKLEERQFKPFEFARTVPAYNPSQRV-FDSIPEIPQNPQTLSLLELLGLPYLLDSSPVTGERTDIPASL 381
BLAST of CX070148 vs. ExPASy Swiss-Prot
Match: DBR1_ORYSJ (Lariat debranching enzyme OS=Oryza sativa subsp. japonica GN=DBR1 PE=2 SV=1) HSP 1 Score: 213.772 bits (543), Expect = 9.708e-55 Identity = 106/167 (63.47%), Postives = 121/167 (72.46%), Query Frame = 1 Query: 4 TLGSEPAAQLLEKLKPSYWFSAHLHCKFAAVVQHGEDSPVTKFLALDKCLPRRKFLQVFEIESGQGPYEIQYDEEWLAITRTFNSVFPLTSQSANFGGVQHDMNDCRQWVRSRLQERGAKPFEFVRTVPCYDASQSLSIGAFAENPQNPQTESFLQFLELPNLFENA 504 TLGSEPAA+LL KLKP YWFSAHLHCKF AV+QHGE P TKFLALDKCLPRR FLQV +I SG GP+EIQYDEEWLAITR FN+VF LT Q D D QWVR++L RGAKP +FV+T YD S S + + +NPQTESFLQ L LP L +++ Sbjct: 204 TLGSEPAARLLNKLKPPYWFSAHLHCKFPAVIQHGEGGPTTKFLALDKCLPRRGFLQVIDIPSGPGPHEIQYDEEWLAITRKFNNVFSLTRMPFTMLDEQVDTQDDLQWVRNKLNARGAKPIDFVQTAASYDPSCQASNPSITVHCRNPQTESFLQLLNLPYLLDSS 370
BLAST of CX070148 vs. ExPASy Swiss-Prot
Match: DBR1_XENTR (Lariat debranching enzyme OS=Xenopus tropicalis GN=dbr1 PE=2 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 5.196e-24 Identity = 75/197 (38.07%), Postives = 103/197 (52.28%), Query Frame = 1 Query: 4 TLGSEPAAQLLEKLKPSYWFSAHLHCKFAAVVQH-----GEDSPVTKFLALDKCLPRRKFLQVFEIESGQG-PYEIQYDEEWLAITRTFNSVFPLTSQSANF---GGV--QHDMNDCRQWVRSRLQERGAK---PFEFVRTVPCYDASQSLSIGAFAENPQNPQTESFLQFLELPNLFENALESREPTQSPATLDHK 552 TLGS A++LL ++PSYWFSAHLH KFAA +QH GE TKFLALDKCLP R+FLQ+ ++E G P ++YD EWLA+ + + +TS++ N G+ + D + + R L + G P F T CYD + A + NPQT F L L +L + E T D++ Sbjct: 204 TLGSPAASELLLHIQPSYWFSAHLHVKFAAFMQHQTNVEGEIPKATKFLALDKCLPHREFLQIVDVEHDPGKPDCLEYDLEWLAVLKATKDLLNITSKTWNMPENNGLHSRWDFSASEKTKREILDDLGHDIKIPCNFCMTTACYDPNNP-QYKRVATHIVNPQTTEFCARLGLVDLNAKIRQHEEEGDIDITEDNE 399
BLAST of CX070148 vs. ExPASy Swiss-Prot
Match: DBR1_DANRE (Lariat debranching enzyme OS=Danio rerio GN=dbr1 PE=1 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 8.863e-24 Identity = 71/178 (39.89%), Postives = 96/178 (53.93%), Query Frame = 1 Query: 4 TLGSEPAAQLLEKLKPSYWFSAHLHCKFAAVVQHGEDS----PVTKFLALDKCLPRRKFLQVFEIESGQGPYE-IQYDEEWLAITRTFNSVFPLTSQSANFGGVQHDMNDCRQWVRSRLQERGAK-----------PFEFVRTVPCYDASQSL--SIGAFAENPQNPQTESFLQFLEL 483 TLGS AA LLE L+PSYWFSAHLH KFAA++QH + +TKFL+LDKCLP R FLQ+ E+ G E ++YD EWLAI + ++ L + NF D +W S +E + P F TVP YD SQ ++ A++ NPQ + + L ++ Sbjct: 204 TLGSPAAADLLEHLQPSYWFSAHLHVKFAALMQHEAKNNTAPKITKFLSLDKCLPHRDFLQIVEVADRPGSSEQLEYDPEWLAILKATDN---LQKPTCNFWNPPQDNGLHSRWDFSASEEAMMEVVSDLSGDLCIPENFSLTVPPYDPSQPQPHALPAYSTNPQTTELCATLNLTDI 378
BLAST of CX070148 vs. ExPASy Swiss-Prot
Match: DBR1_HUMAN (Lariat debranching enzyme OS=Homo sapiens GN=DBR1 PE=1 SV=2) HSP 1 Score: 109.768 bits (273), Expect = 1.974e-23 Identity = 72/190 (37.89%), Postives = 97/190 (51.05%), Query Frame = 1 Query: 4 TLGSEPAAQLLEKLKPSYWFSAHLHCKFAAVVQH-----GEDSPVTKFLALDKCLPRRKFLQVFEIE-SGQGPYEIQYDEEWLAITRTFNSVFPLTSQSAN------------FGGVQHDMNDCRQWVRSRLQERGAKPFEFVRTVPCYDASQSLSIGAFAENPQNPQTESFLQFLELPNLFENALESRE 519 TLGS A++LLE LKP+YWFSAHLH KFAA++QH G+ + TKFLALDKCLP R FLQ+ EIE P ++YD EWL I R + + +T + N + + M + V +L P F T CYD S+ + NPQT F L + ++ +S+E Sbjct: 204 TLGSPAASELLEHLKPTYWFSAHLHVKFAALMQHQAKDKGQTARATKFLALDKCLPHRDFLQILEIEHDPSAPDYLEYDIEWLTILRATDDLINVTGRLWNMPENNGLHARWDYSATEEGMKE----VLEKLNHDLKVPCNFSVTAACYDPSKPQTQMQLIHR-INPQTTEFCAQLGIIDINVRLQKSKE 388
BLAST of CX070148 vs. ExPASy Swiss-Prot
Match: DBR1B_XENLA (Lariat debranching enzyme B OS=Xenopus laevis GN=dbr1-B PE=2 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 7.503e-23 Identity = 70/186 (37.63%), Postives = 98/186 (52.69%), Query Frame = 1 Query: 4 TLGSEPAAQLLEKLKPSYWFSAHLHCKFAAVVQH-----GEDSPVTKFLALDKCLPRRKFLQVFEIESGQGPYE-IQYDEEWLAITRTFNSVFPLTSQSANF---GGV--QHDMNDCRQWVRSRLQERGAK---PFEFVRTVPCYDASQSLSIGAFAENPQNPQTESFLQFLELPNLFENALESRE 519 TLGS A++LL ++PSYWFSAHLH KFAA +QH GE TKFLALDKCLPRR+FLQ+ ++E E ++YD EWL++ + + +T + N G+ + D + + R + + G P F T CYD + A + NPQT F L L +L ++ E Sbjct: 204 TLGSPAASELLLHIQPSYWFSAHLHVKFAAFMQHQTNVDGEIPKATKFLALDKCLPRREFLQIVDVEHDSAKSECLEYDLEWLSVLKATKDLLNITPNTWNMPENNGLHSRWDFSASEETKREVVSDLGHDLKIPCNFSMTTACYDPNNP-QYKRVATHIVNPQTTEFCARLGLVDLNAKICQNEE 388
BLAST of CX070148 vs. ExPASy Swiss-Prot
Match: DBR1_CHICK (Lariat debranching enzyme OS=Gallus gallus GN=DBR1 PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 9.799e-23 Identity = 69/186 (37.10%), Postives = 97/186 (52.15%), Query Frame = 1 Query: 4 TLGSEPAAQLLEKLKPSYWFSAHLHCKFAAVVQHGEDS-----PVTKFLALDKCLPRRKFLQVFEIESGQGPYE-IQYDEEWLAITRTFNSVFPLTSQS-----ANFGGVQHDMNDCRQWVRSRLQERGAK---PFEFVRTVPCYDASQSLSIGAFAENPQNPQTESFLQFLELPNLFENALESRE 519 TLGS A++LL+ LKP+YWFSAHLH KFAA +QH S TKFLALDKCLP R FLQ+ +IE + ++YD EW+A+ + NS+ +T S N + D + + ++ L+E P F T CYD S+ + NPQT F L ++ + + +E Sbjct: 204 TLGSPAASELLQHLKPNYWFSAHLHVKFAAFMQHETKSKEELPKATKFLALDKCLPHRDFLQIIDIEHDPTAGDSLEYDAEWIAVLKATNSLINVTQSSWSVPENNGLHAKWDYSATEEAIKEVLEELNHNLKIPCNFTLTTTCYDPSKPQK-NMEPVHTINPQTTEFCAQFGLTDINDRIQQVKE 388
BLAST of CX070148 vs. ExPASy Swiss-Prot
Match: DBR1_MOUSE (Lariat debranching enzyme OS=Mus musculus GN=Dbr1 PE=1 SV=2) HSP 1 Score: 107.071 bits (266), Expect = 1.280e-22 Identity = 70/190 (36.84%), Postives = 94/190 (49.47%), Query Frame = 1 Query: 4 TLGSEPAAQLLEKLKPSYWFSAHLHCKFAAVVQH-----GEDSPVTKFLALDKCLPRRKFLQVFEIE-SGQGPYEIQYDEEWLAITRTFNSVFPLTSQSAN------------FGGVQHDMNDCRQWVRSRLQERGAKPFEFVRTVPCYDASQSLSIGAFAENPQNPQTESFLQFLELPNLFENALESRE 519 TLGS A++LLE L+P+YWFSAHLH KFAA++QH + TKFLALDKCLP R FLQV EIE P ++YD EWL + R + + +T N + + M + V +L P F T CYD S+ + NPQT F L + ++ ++RE Sbjct: 204 TLGSPAASELLEHLQPAYWFSAHLHVKFAALMQHQATDKDQAGKETKFLALDKCLPHRDFLQVLEIEHDPSAPEYLEYDVEWLTVLRATDDLINVTGGLWNMPEDNGLHTRWDYSATEETMKE----VMEKLNHDPKVPCNFTMTAACYDPSKPQTQVKLVHR-INPQTTEFCAQLGITDINVMIQKARE 388
BLAST of CX070148 vs. ExPASy Swiss-Prot
Match: DBR1A_XENLA (Lariat debranching enzyme A OS=Xenopus laevis GN=dbr1-A PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.851e-22 Identity = 69/176 (39.20%), Postives = 93/176 (52.84%), Query Frame = 1 Query: 4 TLGSEPAAQLLEKLKPSYWFSAHLHCKFAAVVQH----GEDSPVTKFLALDKCLPRRKFLQVFEIESGQG-PYEIQYDEEWLAITRTFNSVFPLTSQSANFG-----GVQHDMNDCRQWVRSRLQERGAK---PFEFVRTVPCYDASQSLSIGAFAENPQNPQTESFLQFLELPNL 492 TLGS A++LL ++PSYWFSAHLH KFAA +QH GE TKFLALDKCLP R+FLQ+ ++E P ++YD EWLA+ + + +TS++ N + D + + R L + G P F T CYD + + NPQT F L L +L Sbjct: 204 TLGSPAASELLLHIQPSYWFSAHLHVKFAAFMQHQNNVGEIPKATKFLALDKCLPHREFLQIVDMEHDPSKPECLEYDLEWLAVLKATKDLLNITSKTWNMPENNGLHARWDFSMSEETKREVLDDLGHDIKIPCNFSVTTACYDPNNP-QYKRMPTHIVNPQTTEFCARLGLVDL 378
BLAST of CX070148 vs. ExPASy Swiss-Prot
Match: DBR1_DROME (Lariat debranching enzyme OS=Drosophila melanogaster GN=ldbr PE=1 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 8.295e-22 Identity = 72/212 (33.96%), Postives = 102/212 (48.11%), Query Frame = 1 Query: 1 GTLGSEPAAQLLEKLKPSYWFSAHLHCKFAAVVQHGEDS-------------------------------------PVTKFLALDKCLPRRKFLQVFEIESG--QGPYEIQYDEEWLAITRTFNSVFPLT--------------SQSANFGGVQHDMNDCRQWVRSRLQERGAKPFEFVRTVPCYD-ASQSLSIGAFAENPQ---NPQTESF 465 G LGS+P +LL+ ++P+YWF+AHLHCKFAA+V H PVTKFLALDKCLPRR FLQV E+ S +G ++YD EWLAI + N + + ++ +NF + ++ + V ++ Q+ P F RTVP +D A QS F + P+ NPQ+ +F Sbjct: 203 GKLGSQPLEELLKAVQPAYWFAAHLHCKFAALVPHNHSQKLGDAESSSSSSSSEDEDEEREKVKKAAPVPPPSKSVPVTKFLALDKCLPRRAFLQVVEVPSDPIEGTPRLEYDAEWLAILHSTNHLISVKENYYYLPGKKAGEFTERSNFTPTEEEL----EAVTAKFQKLQV-PENFERTVPAFDPAEQSDYKHMFVDQPKVQLNPQSNTF 409 The following BLAST results are available for this feature:
BLAST of CX070148 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >CX070148 ID=CX070148; Name=CX070148; organism=Citrus sinensis; type=EST; length=829bpback to top |