CX069516
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX069516 vs. ExPASy Swiss-Prot
Match: VATC_ARATH (V-type proton ATPase subunit C OS=Arabidopsis thaliana GN=VHA-C PE=1 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 8.489e-42 Identity = 81/109 (74.31%), Postives = 88/109 (80.73%), Query Frame = 3 Query: 51 KLVHDQESLRSSLLQWCYTSYGEVFSSWMHFCAVRVFAESILRYGLPPSFLACVLAPSVKGEKKVRSILEELCGNANSTFWKSEXXXXXXXXXXXXXXSHPYVSFTINL 377 KLV DQESLRSSLLQWCYTSYGEVFSSWMHFCAVR FAESI+RYGLPP+FLACVL+P+VK EKKVRSILE LC + NS +WKSE +HPYVSFTINL Sbjct: 266 KLVQDQESLRSSLLQWCYTSYGEVFSSWMHFCAVRTFAESIMRYGLPPAFLACVLSPAVKSEKKVRSILERLCDSTNSLYWKSEEDAGAMAGLAGDSETHPYVSFTINL 374
BLAST of CX069516 vs. ExPASy Swiss-Prot
Match: VATC_DICDI (V-type proton ATPase subunit C OS=Dictyostelium discoideum GN=vatC PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.409e-12 Identity = 31/69 (44.93%), Postives = 48/69 (69.57%), Query Frame = 3 Query: 51 KLVHDQESLRSSLLQWCYTSYGEVFSSWMHFCAVRVFAESILRYGLPPSFLACVLAPSVKGEKKVRSIL 257 KL D+++ R+SL++WC ++ E F +W+H VRVF ES+LR+G+P +F A ++ P +KKVR IL Sbjct: 264 KLTEDKKNCRTSLIRWCRLNFPEAFMAWVHLKVVRVFVESVLRFGIPFNFQAILMKPQKGADKKVRDIL 332
BLAST of CX069516 vs. ExPASy Swiss-Prot
Match: VATC_ASCSS (V-type proton ATPase subunit C 2 OS=Ascidia sydneiensis samea GN=VATC PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.409e-12 Identity = 33/79 (41.77%), Postives = 50/79 (63.29%), Query Frame = 3 Query: 51 KLVHDQESLRSSLLQWCYTSYGEVFSSWMHFCAVRVFAESILRYGLPPSFLACVLAPSVKGEKKVRSILEELCGNANST 287 K+ ++ + LL+W ++ EVF++W+H A+RVF ES+LRYGLP +F A VL P K K++R +L L +ST Sbjct: 268 KIASEKRKMLGPLLRWLKVNFSEVFTAWIHIKALRVFVESVLRYGLPVNFQAVVLDPPKKNRKRLRDVLNNLYCKLDST 346
BLAST of CX069516 vs. ExPASy Swiss-Prot
Match: VTC1B_DANRE (V-type proton ATPase subunit C 1-B OS=Danio rerio GN=atp6v1c1b PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 9.154e-12 Identity = 36/115 (31.30%), Postives = 64/115 (55.65%), Query Frame = 3 Query: 33 EEEGWEKLVHDQESLRSSLLQWCYTSYGEVFSSWMHFCAVRVFAESILRYGLPPSFLACVLAPSVKGEKKVRSILEELCGNANSTFWKSEXXXXXXXXXXXXXXSHPYVSFTINL 377 ++E +L D++ L++W ++ E F +W+H A+RVF ES+LRYGLP +F A +L P+ K KK+R +L++L + +S+ + +PYV + I++ Sbjct: 261 DKEEMTRLSTDKKKQFGPLVRWLKVNFSETFIAWIHIKALRVFTESVLRYGLPVNFQAMLLQPNKKNVKKLREVLKDLYKHLDSSAAVIDGSVDIPGLNLSQQEYYPYVYYKIDV 375
BLAST of CX069516 vs. ExPASy Swiss-Prot
Match: VATC1_RAT (V-type proton ATPase subunit C 1 OS=Rattus norvegicus GN=Atp6v1c1 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 9.154e-12 Identity = 33/85 (38.82%), Postives = 54/85 (63.53%), Query Frame = 3 Query: 33 EEEGWEKLVHDQESLRSSLLQWCYTSYGEVFSSWMHFCAVRVFAESILRYGLPPSFLACVLAPSVKGEKKVRSILEELCGNANST 287 ++E +L D++ L++W ++ E F +W+H A+RVF ES+LRYGLP +F A +L P+ K KK+R +L EL + +S+ Sbjct: 261 DKEEMNRLSTDKKKQFGPLVRWLKVNFSEAFIAWIHIKALRVFVESVLRYGLPVNFQAMLLQPNKKSVKKLREVLHELYKHLDSS 345
BLAST of CX069516 vs. ExPASy Swiss-Prot
Match: VATC1_MOUSE (V-type proton ATPase subunit C 1 OS=Mus musculus GN=Atp6v1c1 PE=1 SV=4) HSP 1 Score: 70.4774 bits (171), Expect = 1.196e-11 Identity = 33/85 (38.82%), Postives = 54/85 (63.53%), Query Frame = 3 Query: 33 EEEGWEKLVHDQESLRSSLLQWCYTSYGEVFSSWMHFCAVRVFAESILRYGLPPSFLACVLAPSVKGEKKVRSILEELCGNANST 287 ++E +L D++ L++W ++ E F +W+H A+RVF ES+LRYGLP +F A +L P+ K KK+R +L EL + +S+ Sbjct: 261 DKEEMTRLSTDKKKQFGPLVRWLKVNFSEAFIAWIHIKALRVFVESVLRYGLPVNFQAMLLQPNKKSVKKLREVLHELYKHLDSS 345
BLAST of CX069516 vs. ExPASy Swiss-Prot
Match: VATC1_PONAB (V-type proton ATPase subunit C 1 OS=Pongo abelii GN=ATP6V1C1 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.663e-11 Identity = 33/85 (38.82%), Postives = 54/85 (63.53%), Query Frame = 3 Query: 33 EEEGWEKLVHDQESLRSSLLQWCYTSYGEVFSSWMHFCAVRVFAESILRYGLPPSFLACVLAPSVKGEKKVRSILEELCGNANST 287 ++E +L D++ L++W ++ E F +W+H A+RVF ES+LRYGLP +F A +L P+ K KK+R +L EL + +S+ Sbjct: 261 DKEEMNRLSTDKKKQFGPLVRWLKVNFSEAFIAWIHVKALRVFVESVLRYGLPVNFQAMLLQPNKKTLKKLREVLHELYKHLDSS 345
BLAST of CX069516 vs. ExPASy Swiss-Prot
Match: VATC1_MACFA (V-type proton ATPase subunit C 1 OS=Macaca fascicularis GN=ATP6V1C1 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.663e-11 Identity = 33/85 (38.82%), Postives = 54/85 (63.53%), Query Frame = 3 Query: 33 EEEGWEKLVHDQESLRSSLLQWCYTSYGEVFSSWMHFCAVRVFAESILRYGLPPSFLACVLAPSVKGEKKVRSILEELCGNANST 287 ++E +L D++ L++W ++ E F +W+H A+RVF ES+LRYGLP +F A +L P+ K KK+R +L EL + +S+ Sbjct: 261 DKEEMNRLSTDKKKQFGPLVRWLKVNFSEAFIAWIHVKALRVFVESVLRYGLPVNFQAMLLQPNKKTLKKLREVLHELYKHLDSS 345
BLAST of CX069516 vs. ExPASy Swiss-Prot
Match: VATC1_HUMAN (V-type proton ATPase subunit C 1 OS=Homo sapiens GN=ATP6V1C1 PE=1 SV=4) HSP 1 Score: 69.3218 bits (168), Expect = 2.663e-11 Identity = 33/85 (38.82%), Postives = 54/85 (63.53%), Query Frame = 3 Query: 33 EEEGWEKLVHDQESLRSSLLQWCYTSYGEVFSSWMHFCAVRVFAESILRYGLPPSFLACVLAPSVKGEKKVRSILEELCGNANST 287 ++E +L D++ L++W ++ E F +W+H A+RVF ES+LRYGLP +F A +L P+ K KK+R +L EL + +S+ Sbjct: 261 DKEEMNRLSTDKKKQFGPLVRWLKVNFSEAFIAWIHVKALRVFVESVLRYGLPVNFQAMLLQPNKKTLKKLREVLHELYKHLDSS 345
BLAST of CX069516 vs. ExPASy Swiss-Prot
Match: VATC1_BOVIN (V-type proton ATPase subunit C 1 OS=Bos taurus GN=ATP6V1C1 PE=1 SV=3) HSP 1 Score: 68.9366 bits (167), Expect = 3.478e-11 Identity = 33/85 (38.82%), Postives = 54/85 (63.53%), Query Frame = 3 Query: 33 EEEGWEKLVHDQESLRSSLLQWCYTSYGEVFSSWMHFCAVRVFAESILRYGLPPSFLACVLAPSVKGEKKVRSILEELCGNANST 287 ++E +L D++ L++W ++ E F +W+H A+RVF ES+LRYGLP +F A +L P+ K KK+R +L EL + +S+ Sbjct: 261 DKEEMNRLSTDKKKQFGPLVRWLKVNFSEAFIAWIHVKALRVFVESVLRYGLPVNFQAMLLQPNKKTMKKLREVLYELYKHLDSS 345 The following BLAST results are available for this feature:
BLAST of CX069516 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >CX069516 ID=CX069516; Name=CX069516; organism=Citrus sinensis; type=EST; length=784bpback to top |