CX069501
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX069501 vs. ExPASy Swiss-Prot
Match: NU6C_CITSI (NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Citrus sinensis GN=ndhG PE=3 SV=1) HSP 1 Score: 278.485 bits (711), Expect = 3.454e-74 Identity = 142/159 (89.31%), Postives = 142/159 (89.31%), Query Frame = -3 Query: 343 MDLPGPIHDFXXXXXXXXXXXXXXXXXLFTNPIYSAFSLGLVLVCISLFYILSNSHFVAAAQLLIYVGAVNVLIIFAVMFMNGSDYSKDFQLNLWTIGDGLTSLVCTSIFFSLITTILDTSWYGIIWTTRANQIIEQDLISNSQQIGIHLSTDFFLPFE 819 MDLPGPIHDF LFTNPIYSAFSLGLVLVCISLFYILSNSHFVAAAQLLIYVGAVNVLIIFAVMFMNGSDYSKDFQLNLWTIGDGLTSLVCTSIFFSLITTILDTSWYGIIWTTRANQIIEQDLISNSQQIGIHLSTDFFLPFE Sbjct: 1 MDLPGPIHDFILVFLGSGLILGGLGVVLFTNPIYSAFSLGLVLVCISLFYILSNSHFVAAAQLLIYVGAVNVLIIFAVMFMNGSDYSKDFQLNLWTIGDGLTSLVCTSIFFSLITTILDTSWYGIIWTTRANQIIEQDLISNSQQIGIHLSTDFFLPFE 159
BLAST of CX069501 vs. ExPASy Swiss-Prot
Match: NU6C_GOSHI (NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Gossypium hirsutum GN=ndhG PE=3 SV=1) HSP 1 Score: 253.447 bits (646), Expect = 1.190e-66 Identity = 130/159 (81.76%), Postives = 136/159 (85.53%), Query Frame = -3 Query: 343 MDLPGPIHDFXXXXXXXXXXXXXXXXXLFTNPIYSAFSLGLVLVCISLFYILSNSHFVAAAQLLIYVGAVNVLIIFAVMFMNGSDYSKDFQLNLWTIGDGLTSLVCTSIFFSLITTILDTSWYGIIWTTRANQIIEQDLISNSQQIGIHLSTDFFLPFE 819 MDLPGPIHDF L TNPIYSAFSLGLVLVCISLFYILSNSHFVAAAQLLIYVGA+NVLI+FAVMFMNGS+Y KDF NLWTIG+GLTSLVCTSI SLITTILDTSWYGIIWTTR+NQIIEQDLISNSQQIGIHL+TDFFLPFE Sbjct: 1 MDLPGPIHDFLLVFLGSGLILGGLGVVLLTNPIYSAFSLGLVLVCISLFYILSNSHFVAAAQLLIYVGAINVLILFAVMFMNGSEYYKDF--NLWTIGNGLTSLVCTSILVSLITTILDTSWYGIIWTTRSNQIIEQDLISNSQQIGIHLATDFFLPFE 157
BLAST of CX069501 vs. ExPASy Swiss-Prot
Match: NU6C_VITVI (NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Vitis vinifera GN=ndhG PE=3 SV=1) HSP 1 Score: 252.292 bits (643), Expect = 2.651e-66 Identity = 129/159 (81.13%), Postives = 135/159 (84.91%), Query Frame = -3 Query: 343 MDLPGPIHDFXXXXXXXXXXXXXXXXXLFTNPIYSAFSLGLVLVCISLFYILSNSHFVAAAQLLIYVGAVNVLIIFAVMFMNGSDYSKDFQLNLWTIGDGLTSLVCTSIFFSLITTILDTSWYGIIWTTRANQIIEQDLISNSQQIGIHLSTDFFLPFE 819 MDLPGPIHDF L TNPIYSAFSLGLV VCISLFYI SNSHFVAAAQLLIYVGA+NVLIIFAVMFMNGS+Y KDF NLWT+GDG+TS+VCTSIF SLITTILDTSWYGIIWTTR+NQIIEQDLISNSQQIGIHLSTDFFLPFE Sbjct: 1 MDLPGPIHDFLLVFLGSGLILGGLGVVLLTNPIYSAFSLGLVFVCISLFYIPSNSHFVAAAQLLIYVGAINVLIIFAVMFMNGSEYYKDF--NLWTVGDGVTSVVCTSIFASLITTILDTSWYGIIWTTRSNQIIEQDLISNSQQIGIHLSTDFFLPFE 157
BLAST of CX069501 vs. ExPASy Swiss-Prot
Match: NU6C_EUCGG (NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Eucalyptus globulus subsp. globulus GN=ndhG PE=3 SV=1) HSP 1 Score: 250.366 bits (638), Expect = 1.007e-65 Identity = 126/159 (79.25%), Postives = 135/159 (84.91%), Query Frame = -3 Query: 343 MDLPGPIHDFXXXXXXXXXXXXXXXXXLFTNPIYSAFSLGLVLVCISLFYILSNSHFVAAAQLLIYVGAVNVLIIFAVMFMNGSDYSKDFQLNLWTIGDGLTSLVCTSIFFSLITTILDTSWYGIIWTTRANQIIEQDLISNSQQIGIHLSTDFFLPFE 819 MDLPGPIHDF L TNPIYSAFSLGLVLVCISLFYILSNSHFVAAAQLLIYVGA+N+LI+FAVMFMNGS+Y KD LNLWT+GDG+TSLVCTSI SL+TTILDTSWYGIIWTT++NQIIEQDLI NSQQIGIHLSTDFFLPFE Sbjct: 1 MDLPGPIHDFLLVFLGSGLILGSLGVVLLTNPIYSAFSLGLVLVCISLFYILSNSHFVAAAQLLIYVGAINILILFAVMFMNGSEYYKD--LNLWTVGDGITSLVCTSILVSLMTTILDTSWYGIIWTTKSNQIIEQDLIGNSQQIGIHLSTDFFLPFE 157
BLAST of CX069501 vs. ExPASy Swiss-Prot
Match: NU6C_CARPA (NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Carica papaya GN=ndhG PE=3 SV=1) HSP 1 Score: 247.284 bits (630), Expect = 8.527e-65 Identity = 126/159 (79.25%), Postives = 133/159 (83.65%), Query Frame = -3 Query: 343 MDLPGPIHDFXXXXXXXXXXXXXXXXXLFTNPIYSAFSLGLVLVCISLFYILSNSHFVAAAQLLIYVGAVNVLIIFAVMFMNGSDYSKDFQLNLWTIGDGLTSLVCTSIFFSLITTILDTSWYGIIWTTRANQIIEQDLISNSQQIGIHLSTDFFLPFE 819 MDL GPIHDF LF NPIYSAFSLG VL CISLFYILSNSHFVAAAQLLIYVGA+NVLIIFAVMFMNGS+Y +DF NLWTIGDG+TSLVCTSIF SLITTILDTSWYG+IWTTR NQI+EQDLIS+SQQIGIHLSTDFFLPFE Sbjct: 1 MDLLGPIHDFLLVFLGSGLILGGLGVVLFPNPIYSAFSLGFVLACISLFYILSNSHFVAAAQLLIYVGAINVLIIFAVMFMNGSEYYRDF--NLWTIGDGITSLVCTSIFLSLITTILDTSWYGVIWTTRLNQILEQDLISSSQQIGIHLSTDFFLPFE 157
BLAST of CX069501 vs. ExPASy Swiss-Prot
Match: NU6C_PANGI (NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Panax ginseng GN=ndhG PE=3 SV=1) HSP 1 Score: 246.899 bits (629), Expect = 1.114e-64 Identity = 126/159 (79.25%), Postives = 134/159 (84.28%), Query Frame = -3 Query: 343 MDLPGPIHDFXXXXXXXXXXXXXXXXXLFTNPIYSAFSLGLVLVCISLFYILSNSHFVAAAQLLIYVGAVNVLIIFAVMFMNGSDYSKDFQLNLWTIGDGLTSLVCTSIFFSLITTILDTSWYGIIWTTRANQIIEQDLISNSQQIGIHLSTDFFLPFE 819 MDLPGPIHDF L NPIYSAFSLGLVLVC SLFYILSNSHFVAAAQLLIYVGA+NVLI+FAVMFMNGS+Y KDF +LWTIGDG+TS+VCTSIF SLITTI DTSWYGIIWTT++NQIIEQDLISNSQQIGIHLSTDFFLPFE Sbjct: 1 MDLPGPIHDFLLVFLGSGLILGGLGVVLLPNPIYSAFSLGLVLVCTSLFYILSNSHFVAAAQLLIYVGAINVLILFAVMFMNGSEYYKDF--HLWTIGDGVTSMVCTSIFVSLITTIPDTSWYGIIWTTKSNQIIEQDLISNSQQIGIHLSTDFFLPFE 157
BLAST of CX069501 vs. ExPASy Swiss-Prot
Match: NU6C_OENPA (NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Oenothera parviflora GN=ndhG PE=3 SV=1) HSP 1 Score: 246.899 bits (629), Expect = 1.114e-64 Identity = 125/159 (78.62%), Postives = 135/159 (84.91%), Query Frame = -3 Query: 343 MDLPGPIHDFXXXXXXXXXXXXXXXXXLFTNPIYSAFSLGLVLVCISLFYILSNSHFVAAAQLLIYVGAVNVLIIFAVMFMNGSDYSKDFQLNLWTIGDGLTSLVCTSIFFSLITTILDTSWYGIIWTTRANQIIEQDLISNSQQIGIHLSTDFFLPFE 819 MDLPGPIHDF L TNPI+SAFSLGLVLVCISLF+ LSNS+FVAAAQLLIYVGA+NVLI+FAVMFMNGS+YSKD L LWT+GDG+TSLVCTSIF SLITTILDTSWYGIIWTT++NQIIEQDLI NSQQIGIHLSTDFFLPFE Sbjct: 1 MDLPGPIHDFLLVFLGSGLIVGGLGVVLLTNPIFSAFSLGLVLVCISLFFSLSNSYFVAAAQLLIYVGAINVLILFAVMFMNGSEYSKD--LTLWTVGDGITSLVCTSIFISLITTILDTSWYGIIWTTKSNQIIEQDLIGNSQQIGIHLSTDFFLPFE 157
BLAST of CX069501 vs. ExPASy Swiss-Prot
Match: NU6C_OENGL (NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Oenothera glazioviana GN=ndhG PE=3 SV=1) HSP 1 Score: 246.899 bits (629), Expect = 1.114e-64 Identity = 125/159 (78.62%), Postives = 135/159 (84.91%), Query Frame = -3 Query: 343 MDLPGPIHDFXXXXXXXXXXXXXXXXXLFTNPIYSAFSLGLVLVCISLFYILSNSHFVAAAQLLIYVGAVNVLIIFAVMFMNGSDYSKDFQLNLWTIGDGLTSLVCTSIFFSLITTILDTSWYGIIWTTRANQIIEQDLISNSQQIGIHLSTDFFLPFE 819 MDLPGPIHDF L TNPI+SAFSLGLVLVCISLF+ LSNS+FVAAAQLLIYVGA+NVLI+FAVMFMNGS+YSKD L LWT+GDG+TSLVCTSIF SLITTILDTSWYGIIWTT++NQIIEQDLI NSQQIGIHLSTDFFLPFE Sbjct: 1 MDLPGPIHDFLLVFLGSGLIVGGLGVVLLTNPIFSAFSLGLVLVCISLFFSLSNSYFVAAAQLLIYVGAINVLILFAVMFMNGSEYSKD--LTLWTVGDGITSLVCTSIFISLITTILDTSWYGIIWTTKSNQIIEQDLIGNSQQIGIHLSTDFFLPFE 157
BLAST of CX069501 vs. ExPASy Swiss-Prot
Match: NU6C_OENEH (NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Oenothera elata subsp. hookeri GN=ndhG PE=3 SV=1) HSP 1 Score: 246.899 bits (629), Expect = 1.114e-64 Identity = 125/159 (78.62%), Postives = 135/159 (84.91%), Query Frame = -3 Query: 343 MDLPGPIHDFXXXXXXXXXXXXXXXXXLFTNPIYSAFSLGLVLVCISLFYILSNSHFVAAAQLLIYVGAVNVLIIFAVMFMNGSDYSKDFQLNLWTIGDGLTSLVCTSIFFSLITTILDTSWYGIIWTTRANQIIEQDLISNSQQIGIHLSTDFFLPFE 819 MDLPGPIHDF L TNPI+SAFSLGLVLVCISLF+ LSNS+FVAAAQLLIYVGA+NVLI+FAVMFMNGS+YSKD L LWT+GDG+TSLVCTSIF SLITTILDTSWYGIIWTT++NQIIEQDLI NSQQIGIHLSTDFFLPFE Sbjct: 1 MDLPGPIHDFLLVFLGSGLIVGGLGVVLLTNPIFSAFSLGLVLVCISLFFSLSNSYFVAAAQLLIYVGAINVLILFAVMFMNGSEYSKD--LTLWTVGDGITSLVCTSIFISLITTILDTSWYGIIWTTKSNQIIEQDLIGNSQQIGIHLSTDFFLPFE 157
BLAST of CX069501 vs. ExPASy Swiss-Prot
Match: NU6C_OENBI (NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Oenothera biennis GN=ndhG PE=3 SV=1) HSP 1 Score: 246.899 bits (629), Expect = 1.114e-64 Identity = 125/159 (78.62%), Postives = 135/159 (84.91%), Query Frame = -3 Query: 343 MDLPGPIHDFXXXXXXXXXXXXXXXXXLFTNPIYSAFSLGLVLVCISLFYILSNSHFVAAAQLLIYVGAVNVLIIFAVMFMNGSDYSKDFQLNLWTIGDGLTSLVCTSIFFSLITTILDTSWYGIIWTTRANQIIEQDLISNSQQIGIHLSTDFFLPFE 819 MDLPGPIHDF L TNPI+SAFSLGLVLVCISLF+ LSNS+FVAAAQLLIYVGA+NVLI+FAVMFMNGS+YSKD L LWT+GDG+TSLVCTSIF SLITTILDTSWYGIIWTT++NQIIEQDLI NSQQIGIHLSTDFFLPFE Sbjct: 1 MDLPGPIHDFLLVFLGSGLIVGGLGVVLLTNPIFSAFSLGLVLVCISLFFSLSNSYFVAAAQLLIYVGAINVLILFAVMFMNGSEYSKD--LTLWTVGDGITSLVCTSIFISLITTILDTSWYGIIWTTKSNQIIEQDLIGNSQQIGIHLSTDFFLPFE 157 The following BLAST results are available for this feature:
BLAST of CX069501 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 102
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Sequences
The
following sequences are available for this feature:
EST sequence >CX069501 ID=CX069501; Name=CX069501; organism=Citrus sinensis; type=EST; length=872bpback to top |