DR403696

Overview
NameDR403696
Unique NameDR403696
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length544
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6114 contig Csv1_Contig6114:1..544. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR403696 vs. ExPASy Swiss-Prot
Match: PMGI_TOBAC (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 9.477e-34
Identity = 70/85 (82.35%), Postives = 75/85 (88.24%), Query Frame = 2
Query:   38 ADHGNAEDMVKRNKSGEPLL-KDGNIQVLTSHTLKPVPIAIGGPGLPDNVKFRADLPNGGLANVAATFINLHGYEAPSDYEPSLI 289
            ADHGNAEDMVKRNK GEP L K+GNIQ+LTSHT +PVPIAIGGPGL   V+FR DLP GGLANVAATF+NLHG EAPSDYEPSLI
Sbjct:  470 ADHGNAEDMVKRNKKGEPALDKNGNIQILTSHTCEPVPIAIGGPGLAPGVRFRQDLPTGGLANVAATFMNLHGSEAPSDYEPSLI 554          
BLAST of DR403696 vs. ExPASy Swiss-Prot
Match: PMGI_PRUDU (2,3-bisphosphoglycerate-independent phosphoglycerate mutase (Fragment) OS=Prunus dulcis PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 6.143e-33
Identity = 67/85 (78.82%), Postives = 77/85 (90.59%), Query Frame = 2
Query:   38 ADHGNAEDMVKRNKSGEPLL-KDGNIQVLTSHTLKPVPIAIGGPGLPDNVKFRADLPNGGLANVAATFINLHGYEAPSDYEPSLI 289
            ADHGNAEDMVKRNK G+PLL K+GNIQ+LTSHTL+PVPIAIGGPGL   V+FR D+PNGGLANVAAT +NLHG+EAP+DYE +LI
Sbjct:  399 ADHGNAEDMVKRNKKGQPLLDKNGNIQILTSHTLQPVPIAIGGPGLAPGVQFRKDVPNGGLANVAATVMNLHGFEAPADYETTLI 483          
BLAST of DR403696 vs. ExPASy Swiss-Prot
Match: PMGI_MESCR (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Mesembryanthemum crystallinum GN=PGM1 PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 3.049e-32
Identity = 65/85 (76.47%), Postives = 76/85 (89.41%), Query Frame = 2
Query:   38 ADHGNAEDMVKRNKSGEPLL-KDGNIQVLTSHTLKPVPIAIGGPGLPDNVKFRADLPNGGLANVAATFINLHGYEAPSDYEPSLI 289
            ADHGNAEDMVKR+K G+P + K+GNIQ+LTSHTL+PVPIAIGGPGL   V+FR D+P GGLANVAAT +NLHG+EAPSDYEP+LI
Sbjct:  470 ADHGNAEDMVKRDKKGQPAMDKNGNIQILTSHTLEPVPIAIGGPGLTPGVRFRNDIPTGGLANVAATVMNLHGFEAPSDYEPTLI 554          
BLAST of DR403696 vs. ExPASy Swiss-Prot
Match: PMGI_RICCO (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Ricinus communis PE=1 SV=2)

HSP 1 Score: 137.502 bits (345), Expect = 3.982e-32
Identity = 65/85 (76.47%), Postives = 76/85 (89.41%), Query Frame = 2
Query:   38 ADHGNAEDMVKRNKSGEPLL-KDGNIQVLTSHTLKPVPIAIGGPGLPDNVKFRADLPNGGLANVAATFINLHGYEAPSDYEPSLI 289
            ADHGNAEDMVKR+KSG+P+  K G IQ+LTSHTL+PVPIAIGGPGL   V+FR+D+P GGLANVAAT +NLHG+EAPSDYEP+LI
Sbjct:  467 ADHGNAEDMVKRDKSGKPMADKSGKIQILTSHTLQPVPIAIGGPGLTPGVRFRSDIPTGGLANVAATVMNLHGFEAPSDYEPTLI 551          
BLAST of DR403696 vs. ExPASy Swiss-Prot
Match: PMG1_ARATH (2,3-bisphosphoglycerate-independent phosphoglycerate mutase 1 OS=Arabidopsis thaliana GN=PGM1 PE=2 SV=3)

HSP 1 Score: 131.339 bits (329), Expect = 2.853e-30
Identity = 64/85 (75.29%), Postives = 73/85 (85.88%), Query Frame = 2
Query:   38 ADHGNAEDMVKRNKSGEPLL-KDGNIQVLTSHTLKPVPIAIGGPGLPDNVKFRADLPNGGLANVAATFINLHGYEAPSDYEPSLI 289
            ADHGNAEDMVKR+KSG+P L K+G +Q+LTSHTLKPVPIAIGGPGL   V+FR DL   GLANVAAT +NLHG+ APSDYEP+LI
Sbjct:  469 ADHGNAEDMVKRDKSGKPALDKEGKLQILTSHTLKPVPIAIGGPGLAQGVRFRKDLETPGLANVAATVMNLHGFVAPSDYEPTLI 553          
BLAST of DR403696 vs. ExPASy Swiss-Prot
Match: PMG2_ARATH (Probable 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 2 OS=Arabidopsis thaliana GN=At3g08590 PE=2 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 6.357e-30
Identity = 64/85 (75.29%), Postives = 73/85 (85.88%), Query Frame = 2
Query:   38 ADHGNAEDMVKRNKSGEPLL-KDGNIQVLTSHTLKPVPIAIGGPGLPDNVKFRADLPNGGLANVAATFINLHGYEAPSDYEPSLI 289
            ADHGNAEDMVKR+KSG+P L K+GN+Q+LTSHTLKPVPIAIGGPGL   V+FR D+   GLANVAAT +NLHG+ APSDYE SLI
Sbjct:  471 ADHGNAEDMVKRDKSGKPALDKEGNLQILTSHTLKPVPIAIGGPGLSAGVRFRQDIETPGLANVAATVMNLHGFVAPSDYETSLI 555          
BLAST of DR403696 vs. ExPASy Swiss-Prot
Match: PMGI_MAIZE (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Zea mays PE=1 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 1.850e-29
Identity = 63/85 (74.12%), Postives = 73/85 (85.88%), Query Frame = 2
Query:   38 ADHGNAEDMVKRNKSGEPLL-KDGNIQVLTSHTLKPVPIAIGGPGLPDNVKFRADLPNGGLANVAATFINLHGYEAPSDYEPSLI 289
            ADHGNAEDMVKRNKSG+PLL K+  IQ+LTSHTL+PVP+AIGGPGL   VKFR D+   GLANVAAT +NLHG+EAP+DYE +LI
Sbjct:  470 ADHGNAEDMVKRNKSGKPLLDKNDRIQILTSHTLQPVPVAIGGPGLHPGVKFRNDIQTPGLANVAATVMNLHGFEAPADYEQTLI 554          
BLAST of DR403696 vs. ExPASy Swiss-Prot
Match: GPMI_LEPIN (Probable 2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Leptospira interrogans GN=gpmI PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 6.386e-14
Identity = 44/86 (51.16%), Postives = 57/86 (66.28%), Query Frame = 2
Query:   38 ADHGNAEDMVKRNKSGEPLLKD--GNIQVLTSHTLKPVPIAIGGPGLPDNVKFRADLPNGGLANVAATFINLHGYEAPSDYEPSLI 289
            ADHGNA++M + +K G  + KD  GN    TSHTL PVPI+I  P   + ++F + L N GLANVAAT +++ GYE P  Y PSLI
Sbjct:  466 ADHGNADEMFQLDKKGN-VEKDSHGNPIPKTSHTLNPVPISILDP--ENKIRFNSKLSNPGLANVAATILDVMGYETPEGYHPSLI 548          
BLAST of DR403696 vs. ExPASy Swiss-Prot
Match: GPMI_LEPIC (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=gpmI PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 6.386e-14
Identity = 44/86 (51.16%), Postives = 57/86 (66.28%), Query Frame = 2
Query:   38 ADHGNAEDMVKRNKSGEPLLKD--GNIQVLTSHTLKPVPIAIGGPGLPDNVKFRADLPNGGLANVAATFINLHGYEAPSDYEPSLI 289
            ADHGNA++M + +K G  + KD  GN    TSHTL PVPI+I  P   + ++F + L N GLANVAAT +++ GYE P  Y PSLI
Sbjct:  466 ADHGNADEMFQLDKKGN-VEKDSHGNPIPKTSHTLNPVPISILDP--ENKIRFNSKLSNPGLANVAATILDVMGYETPEGYHPSLI 548          
The following BLAST results are available for this feature:
BLAST of DR403696 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
PMGI_TOBAC9.477e-3482.352,3-bisphosphoglycerate-independent phosphoglycera... [more]
PMGI_PRUDU6.143e-3378.822,3-bisphosphoglycerate-independent phosphoglycera... [more]
PMGI_MESCR3.049e-3276.472,3-bisphosphoglycerate-independent phosphoglycera... [more]
PMGI_RICCO3.982e-3276.472,3-bisphosphoglycerate-independent phosphoglycera... [more]
PMG1_ARATH2.853e-3075.292,3-bisphosphoglycerate-independent phosphoglycera... [more]
PMG2_ARATH6.357e-3075.29Probable 2,3-bisphosphoglycerate-independent phosp... [more]
PMGI_MAIZE1.850e-2974.122,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_LEPIN6.386e-1451.16Probable 2,3-bisphosphoglycerate-independent phosp... [more]
GPMI_LEPIC6.386e-1451.162,3-bisphosphoglycerate-independent phosphoglycera... [more]
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Properties
Property NameValue
Genbank descriptionCSAC-PNP1241P24 Mature Albedo Citrus sinensis cDNA clone CSAC-PNP1241P24 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403696 ID=DR403696; Name=DR403696; organism=Citrus sinensis; type=EST; length=544bp
TGTGTTGGTCCCGNNNNNNCGGCCATTACGGCCGGGTGCAGATCATGGCA
ATGCTGAGGACATGGTCAAGAGGAACAAATCTGGGGAGCCTCTTCTTAAG
GATGGCAATATTCAAGTGCTCACGTCTCACACTCTTAAACCCGTTCCCAT
TGCAATCGGAGGTCCTGGACTGCCAGATAATGTCAAGTTCCGCGCAGATC
TCCCTAATGGTGGGCTCGCCAATGTAGCAGCAACTTTTATCAATCTCCAT
GGATATGAAGCACCTAGTGACTACGAGCCAAGTCTTATTGAAGTAACTGA
CGACTGAGAAGTAACTGACGACTGGGCGAACAATGGATCGTCGCCTAGAT
TTTATAACTCCGGAGGAATTCCGTTAAAACGTAAAACAATAAATTGAATT
TTGGGGTCTTGAATTCATTTTGATACGCGTGCTGTTTTTCAGCTTACATT
TCGATTGCTGTCTGTTGGAGGCAGACAGAACAATATAGCTCAAAATTTAT
TTTTGTTAGAACTATAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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