DR403425
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DR403425 vs. ExPASy Swiss-Prot
Match: RECAC_ARATH (DNA repair protein recA homolog 1, chloroplastic OS=Arabidopsis thaliana GN=RECA PE=2 SV=1) HSP 1 Score: 220.705 bits (561), Expect = 2.364e-68 Identity = 119/169 (70.41%), Postives = 131/169 (77.51%), Query Frame = 2 Query: 152 FSPFNMKTHLCLLSISSSPLHCQSSRSRFFTASSKLSAARKRDKKISCEFDGKVNGFSSDSGDSRFLDRQRALDAAMNDINSSFGKESVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKAL 658 F+P + S S L S SR + + AA+K KIS EFD ++NG S DSRFLDRQ+AL+AAMNDINSSFGK SVTRLGSAGGALVETF SG LTLDLALGGGLPKGR+VEI+GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDP+YSKAL Sbjct: 15 FTPLSPLFPFTPCSSFSPSLRFSSCYSRRLYSPVTVYAAKKLSHKISSEFDDRINGALSPDADSRFLDRQKALEAAMNDINSSFGKGSVTRLGSAGGALVETFSSGILTLDLALGGGLPKGRVVEIYGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKAL 183 HSP 2 Score: 60.077 bits (144), Expect = 2.364e-68 Identity = 31/45 (68.89%), Postives = 34/45 (75.56%), Query Frame = 3 Query: 651 KHXGVDVENLIVRXXDNGEMALEIADRMCRSGAIDLYLC*LCISS 785 K GVDVENLIV DNGEMALE ADRMCRSGA+DL +C+ S Sbjct: 181 KALGVDVENLIVCQPDNGEMALETADRMCRSGAVDL----ICVDS 221 HSP 3 Score: 21.1718 bits (43), Expect = 2.364e-68 Identity = 9/9 (100.00%), Postives = 9/9 (100.00%), Query Frame = 1 Query: 760 ICVDSVSAL 786 ICVDSVSAL Sbjct: 217 ICVDSVSAL 225
BLAST of DR403425 vs. ExPASy Swiss-Prot
Match: RECA_CYAP7 (Protein recA OS=Cyanothece sp. (strain PCC 7424) GN=recA PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 2.265e-40 Identity = 71/102 (69.61%), Postives = 82/102 (80.39%), Query Frame = 2 Query: 353 DRQRALDAAMNDINSSFGKESVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKAL 658 D+++AL+ +N I SFGK S+ RLG A VET PSG LTLDLALGGGLPKGR++EI+GPESSGKTTLALHAIAEVQK GG A VDAEHA DP+YS+ L Sbjct: 9 DKEKALNLVLNQIERSFGKGSIMRLGDAARMRVETIPSGALTLDLALGGGLPKGRVIEIYGPESSGKTTLALHAIAEVQKAGGVAAFVDAEHALDPTYSEVL 110 HSP 2 Score: 41.9726 bits (97), Expect = 2.265e-40 Identity = 18/33 (54.55%), Postives = 24/33 (72.73%), Query Frame = 3 Query: 660 GVDVENLIVRXXDNGEMALEIADRMCRSGAIDL 758 GVD+ NL+V D GE ALEI D++ RS A+D+ Sbjct: 111 GVDIHNLLVAQPDTGESALEIVDQLVRSAAVDI 143
BLAST of DR403425 vs. ExPASy Swiss-Prot
Match: RECA_SYNS3 (Protein recA OS=Synechococcus sp. (strain CC9311) GN=recA PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 6.520e-40 Identity = 71/116 (61.21%), Postives = 83/116 (71.55%), Query Frame = 2 Query: 311 VNGFSSDSGDSRFLDRQRALDAAMNDINSSFGKESVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKAL 658 V S +GDSR +R +ALD + I +FGK S+ RLG A VET +G LTLDLALGGG PKGR+VE++GPESSGKTTL LHAIAEVQK GG A VDAEHA DP Y+ +L Sbjct: 5 VKAAQSSAGDSRPGERDKALDLVLGQIERNFGKGSIMRLGDASRMRVETISTGALTLDLALGGGYPKGRVVEVYGPESSGKTTLTLHAIAEVQKRGGVAAFVDAEHALDPVYAASL 120 HSP 2 Score: 46.2098 bits (108), Expect = 6.520e-40 Identity = 20/33 (60.61%), Postives = 26/33 (78.79%), Query Frame = 3 Query: 660 GVDVENLIVRXXDNGEMALEIADRMCRSGAIDL 758 GVD+ENL+V D GEMALEI D++ RS A+D+ Sbjct: 121 GVDIENLLVSQPDTGEMALEIVDQLVRSAAVDI 153
BLAST of DR403425 vs. ExPASy Swiss-Prot
Match: RECA_SPIPL (Protein recA OS=Spirulina platensis GN=recA PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 8.500e-40 Identity = 67/102 (65.69%), Postives = 82/102 (80.39%), Query Frame = 2 Query: 353 DRQRALDAAMNDINSSFGKESVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKAL 658 ++Q+AL++ +N I SFGK S+ RLG + VET SG LTLDLALGGGLP+GR++EI+GPESSGKTTLALHAIAE+QK GG A VDAEHA DP+Y+ AL Sbjct: 9 EKQKALNSVLNQIEKSFGKGSIVRLGDSARMKVETISSGALTLDLALGGGLPRGRVIEIYGPESSGKTTLALHAIAEIQKTGGIAAFVDAEHALDPTYAAAL 110 HSP 2 Score: 45.0542 bits (105), Expect = 8.500e-40 Identity = 20/33 (60.61%), Postives = 26/33 (78.79%), Query Frame = 3 Query: 660 GVDVENLIVRXXDNGEMALEIADRMCRSGAIDL 758 GVD+ENL+V D GEMALEI D++ RS A+D+ Sbjct: 111 GVDIENLLVSQPDTGEMALEIVDQLVRSVAVDI 143
BLAST of DR403425 vs. ExPASy Swiss-Prot
Match: RECA_SYNP2 (Protein recA OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=recA PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 3.193e-39 Identity = 65/102 (63.73%), Postives = 79/102 (77.45%), Query Frame = 2 Query: 353 DRQRALDAAMNDINSSFGKESVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKAL 658 D+++AL+ +N I +FGK ++ RLG A V T PSG LTLD A+GGG P+GRIVEI+GPESSGKTT+ALHAIAEVQK GG A +DAEHA DP+YS AL Sbjct: 9 DKEKALNLVLNQIERNFGKGAIMRLGDAAQMKVATIPSGALTLDQAMGGGFPRGRIVEIYGPESSGKTTVALHAIAEVQKAGGVAAFIDAEHALDPTYSAAL 110 HSP 2 Score: 48.521 bits (114), Expect = 3.193e-39 Identity = 22/33 (66.67%), Postives = 27/33 (81.82%), Query Frame = 3 Query: 660 GVDVENLIVRXXDNGEMALEIADRMCRSGAIDL 758 GVD+ENL+V DNGE ALEIAD++ RS A+DL Sbjct: 111 GVDIENLLVAQPDNGESALEIADQLVRSAAVDL 143
BLAST of DR403425 vs. ExPASy Swiss-Prot
Match: RECA_TRIEI (Protein recA OS=Trichodesmium erythraeum (strain IMS101) GN=recA PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 5.417e-39 Identity = 68/102 (66.67%), Postives = 80/102 (78.43%), Query Frame = 2 Query: 353 DRQRALDAAMNDINSSFGKESVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKAL 658 ++Q+ALD+ + I +FGK S+ RLG A VET SG LTLDLALGGGLPKGR++EI+GPESSGKTTLALHAIAE QK GG A VDAEHA DP+Y+ AL Sbjct: 9 EKQKALDSVLKTIEKTFGKGSIVRLGDATRMKVETISSGALTLDLALGGGLPKGRVIEIYGPESSGKTTLALHAIAETQKSGGIAAFVDAEHALDPTYAAAL 110 HSP 2 Score: 44.2838 bits (103), Expect = 5.417e-39 Identity = 19/33 (57.58%), Postives = 25/33 (75.76%), Query Frame = 3 Query: 660 GVDVENLIVRXXDNGEMALEIADRMCRSGAIDL 758 GVD+ENL+V D GEMALE+ D + RS A+D+ Sbjct: 111 GVDIENLLVSQPDTGEMALEVVDHLVRSVAVDI 143
BLAST of DR403425 vs. ExPASy Swiss-Prot
Match: RECA_SYNY3 (Protein recA OS=Synechocystis sp. (strain PCC 6803) GN=recA PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 5.418e-39 Identity = 70/102 (68.63%), Postives = 80/102 (78.43%), Query Frame = 2 Query: 353 DRQRALDAAMNDINSSFGKESVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKAL 658 DR++AL+AA+ I SFGK ++ RLG A VET +G LTLDLALGGGLPKGRIVEI+GPESSGKTTLALHA+A Q+ GG A VDAEHA DP YSKAL Sbjct: 8 DREKALNAALAQIERSFGKGAIMRLGDATQMRVETISTGALTLDLALGGGLPKGRIVEIYGPESSGKTTLALHAVAATQQAGGVAAFVDAEHALDPVYSKAL 109 HSP 2 Score: 45.0542 bits (105), Expect = 5.418e-39 Identity = 20/36 (55.56%), Postives = 27/36 (75.00%), Query Frame = 3 Query: 651 KHXGVDVENLIVRXXDNGEMALEIADRMCRSGAIDL 758 K GVD++NL+V DNGE ALEI D++ RS A+D+ Sbjct: 107 KALGVDIDNLLVAQPDNGESALEIVDQLVRSTAVDI 142
BLAST of DR403425 vs. ExPASy Swiss-Prot
Match: RECA_CYAP8 (Protein recA OS=Cyanothece sp. (strain PCC 8801) GN=recA PE=3 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 5.420e-39 Identity = 70/102 (68.63%), Postives = 80/102 (78.43%), Query Frame = 2 Query: 353 DRQRALDAAMNDINSSFGKESVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKAL 658 D+++AL +N I +FGK S+ RLG A VET SG LTLDLALGGGLP+GRI+EI+GPESSGKTTLALHAIAEVQK GG A VDAEHA DP+YS AL Sbjct: 9 DKEKALGLVLNQIERNFGKGSIMRLGDAARMRVETISSGSLTLDLALGGGLPQGRIIEIYGPESSGKTTLALHAIAEVQKAGGVAAFVDAEHALDPNYSNAL 110 HSP 2 Score: 42.743 bits (99), Expect = 5.420e-39 Identity = 18/33 (54.55%), Postives = 25/33 (75.76%), Query Frame = 3 Query: 660 GVDVENLIVRXXDNGEMALEIADRMCRSGAIDL 758 GVD++NL+V D GE ALEI D++ RS A+D+ Sbjct: 111 GVDIDNLLVAQPDTGESALEIVDQLVRSAAVDI 143
BLAST of DR403425 vs. ExPASy Swiss-Prot
Match: RECA_PROMM (Protein recA OS=Prochlorococcus marinus (strain MIT 9313) GN=recA PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 2.647e-38 Identity = 65/102 (63.73%), Postives = 78/102 (76.47%), Query Frame = 2 Query: 353 DRQRALDAAMNDINSSFGKESVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKAL 658 +R +AL+ + I +FGK S+ RLG A VETFP+G LTLDLALGGG PKGR+VE++GPESSGKTTL LHAIAEVQ+ GG A VDAEHA DP Y+ +L Sbjct: 24 ERDKALNLVLGQIERNFGKGSIMRLGDASRMRVETFPTGALTLDLALGGGYPKGRVVEVYGPESSGKTTLTLHAIAEVQRRGGVAAFVDAEHALDPVYAASL 125 HSP 2 Score: 46.2098 bits (108), Expect = 2.647e-38 Identity = 20/33 (60.61%), Postives = 26/33 (78.79%), Query Frame = 3 Query: 660 GVDVENLIVRXXDNGEMALEIADRMCRSGAIDL 758 GVD+ENL+V D GEMALEI D++ RS A+D+ Sbjct: 126 GVDIENLLVSQPDTGEMALEIVDQLVRSAAVDI 158
BLAST of DR403425 vs. ExPASy Swiss-Prot
Match: RECA_PROM3 (Protein recA OS=Prochlorococcus marinus (strain MIT 9303) GN=recA PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 2.647e-38 Identity = 65/102 (63.73%), Postives = 78/102 (76.47%), Query Frame = 2 Query: 353 DRQRALDAAMNDINSSFGKESVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKAL 658 +R +AL+ + I +FGK S+ RLG A VETFP+G LTLDLALGGG PKGR+VE++GPESSGKTTL LHAIAEVQ+ GG A VDAEHA DP Y+ +L Sbjct: 24 ERDKALNLVLGQIERNFGKGSIMRLGDASRMRVETFPTGALTLDLALGGGYPKGRVVEVYGPESSGKTTLTLHAIAEVQRRGGVAAFVDAEHALDPVYAASL 125 HSP 2 Score: 46.2098 bits (108), Expect = 2.647e-38 Identity = 20/33 (60.61%), Postives = 26/33 (78.79%), Query Frame = 3 Query: 660 GVDVENLIVRXXDNGEMALEIADRMCRSGAIDL 758 GVD+ENL+V D GEMALEI D++ RS A+D+ Sbjct: 126 GVDIENLLVSQPDTGEMALEIVDQLVRSAAVDI 158 The following BLAST results are available for this feature:
BLAST of DR403425 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DR403425 ID=DR403425; Name=DR403425; organism=Citrus sinensis; type=EST; length=786bpback to top |