FC922036
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC922036 vs. ExPASy Swiss-Prot
Match: PAO4_ARATH (Probable polyamine oxidase 4 OS=Arabidopsis thaliana GN=PAO4 PE=1 SV=1) HSP 1 Score: 201.445 bits (511), Expect = 1.129e-51 Identity = 93/113 (82.30%), Postives = 103/113 (91.15%), Query Frame = 2 Query: 2 PLGILKANLIQFEPKLPEWKLSAIADIGVGNENKIALRFDNVFWPNVELLGVVAPTSYACGYFLNLHKATGHPVLVYMAAGRFAYDLEKLSDESAANFVMMQLKKMFPDATEP 340 P+G+LKANLIQFEP+LP+WK SAI+ +GVGNENKIALRFD FWPNVE LG+VAPTSYACGYFLNLHKATGHPVLVYMAAG A DLEKLSDE+ ANFVM+QLKKMFPDA +P Sbjct: 278 PIGVLKANLIQFEPELPQWKTSAISGLGVGNENKIALRFDRAFWPNVEFLGMVAPTSYACGYFLNLHKATGHPVLVYMAAGNLAQDLEKLSDEATANFVMLQLKKMFPDAPDP 390
BLAST of FC922036 vs. ExPASy Swiss-Prot
Match: PAO3_ARATH (Polyamine oxidase 3 OS=Arabidopsis thaliana GN=PAO3 PE=1 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 4.300e-43 Identity = 80/114 (70.18%), Postives = 92/114 (80.70%), Query Frame = 2 Query: 2 PLGILKANLIQFEPKLPEWKLSAIADIGVGNENKIALRFDNVFWPNVELLGVVAPTSYACGYFLNLHKATGHPVLVYMAAGRFAYDLEKLSDESAANFVMMQLKKMFPDATEPV 343 PLG+LK+ +I FEPKLP+WK AI D+GVG ENKI L FDNVFWPNVE LGVVA TSY C YFLNLHKAT HPVLVYM AG+ A D+EK SDE+AANF QL+K+ PDA+ P+ Sbjct: 277 PLGVLKSGMITFEPKLPQWKQEAINDLGVGIENKIILNFDNVFWPNVEFLGVVAETSYGCSYFLNLHKATSHPVLVYMPAGQLARDIEKKSDEAAANFAFSQLQKILPDASSPI 390
BLAST of FC922036 vs. ExPASy Swiss-Prot
Match: PAO2_ARATH (Probable polyamine oxidase 2 OS=Arabidopsis thaliana GN=PAO2 PE=2 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 1.634e-42 Identity = 79/114 (69.30%), Postives = 93/114 (81.58%), Query Frame = 2 Query: 2 PLGILKANLIQFEPKLPEWKLSAIADIGVGNENKIALRFDNVFWPNVELLGVVAPTSYACGYFLNLHKATGHPVLVYMAAGRFAYDLEKLSDESAANFVMMQLKKMFPDATEPV 343 PLG+LK+ I+FEPKLPEWK AI D+GVG ENKI L F+ VFWP VE LGVVA TSY C YFLNLHKATGHPVLVYM AG+ A D+EK+SDE+AANF ++QL+++ PDA PV Sbjct: 276 PLGVLKSGTIKFEPKLPEWKQEAINDLGVGIENKIILHFEKVFWPKVEFLGVVAETSYGCSYFLNLHKATGHPVLVYMPAGQLAKDIEKMSDEAAANFAVLQLQRILPDALPPV 389
BLAST of FC922036 vs. ExPASy Swiss-Prot
Match: KDM1_MOUSE (Lysine-specific histone demethylase 1 OS=Mus musculus GN=Kdm1 PE=1 SV=2) HSP 1 Score: 81.2629 bits (199), Expect = 1.703e-15 Identity = 50/119 (42.02%), Postives = 68/119 (57.14%), Query Frame = 2 Query: 2 PLGILKAN--LIQFEPKLPEWKLSAIADIGVGNENKIALRFDNVFW-PNVELLGVVAPTSYACG---YFLNLHKATGHPVLVYMAAGRFAYDLEKLSDESAANFVMMQLKKMFPDATEP 340 PLG+LK +QF P LPEWK SA+ +G GN NK+ L FD VFW P+V L G V T+ + G F NL+KA P+L+ + AG A +E +SD+ + LK +F + P Sbjct: 627 PLGVLKQQPPAVQFVPPLPEWKTSAVQRMGFGNLNKVVLCFDRVFWDPSVNLFGHVGSTTASRGELFLFWNLYKA---PILLALVAGEAAGIMENISDDVIVGRCLAILKGIFGSSAVP 742
BLAST of FC922036 vs. ExPASy Swiss-Prot
Match: KDM1_HUMAN (Lysine-specific histone demethylase 1 OS=Homo sapiens GN=KDM1 PE=1 SV=2) HSP 1 Score: 81.2629 bits (199), Expect = 1.703e-15 Identity = 50/119 (42.02%), Postives = 68/119 (57.14%), Query Frame = 2 Query: 2 PLGILKAN--LIQFEPKLPEWKLSAIADIGVGNENKIALRFDNVFW-PNVELLGVVAPTSYACG---YFLNLHKATGHPVLVYMAAGRFAYDLEKLSDESAANFVMMQLKKMFPDATEP 340 PLG+LK +QF P LPEWK SA+ +G GN NK+ L FD VFW P+V L G V T+ + G F NL+KA P+L+ + AG A +E +SD+ + LK +F + P Sbjct: 626 PLGVLKQQPPAVQFVPPLPEWKTSAVQRMGFGNLNKVVLCFDRVFWDPSVNLFGHVGSTTASRGELFLFWNLYKA---PILLALVAGEAAGIMENISDDVIVGRCLAILKGIFGSSAVP 741
BLAST of FC922036 vs. ExPASy Swiss-Prot
Match: LSDA_DROME (Possible lysine-specific histone demethylase 1 OS=Drosophila melanogaster GN=Su(var)3-3 PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 1.220e-13 Identity = 39/109 (35.78%), Postives = 60/109 (55.05%), Query Frame = 2 Query: 17 KANLIQFEPKLPEWKLSAIADIGVGNENKIALRFDNVFW-PNVELLGVVAPTSYACGYFLNLHKATGHPVLVYMAAGRFAYDLEKLSDESAANFVMMQLKKMFPDATEP 340 ++N ++F+P LP+WK AI +G GN NK+ L FD +FW PN L G V T+ + G + PVL+ + AG A +E ++D+ M LK +F + + P Sbjct: 634 QSNTVKFDPPLPDWKQQAIKRLGFGNLNKVVLCFDRIFWDPNANLFGHVGSTTASRGEMFLFWSISSSPVLLALVAGMAANLVESVTDDIIIGRCMSVLKNIFGNTSVP 742
BLAST of FC922036 vs. ExPASy Swiss-Prot
Match: LDL2_ORYSJ (Lysine-specific histone demethylase 1 homolog 2 OS=Oryza sativa subsp. japonica GN=Os08g0143400 PE=2 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 3.323e-11 Identity = 41/111 (36.94%), Postives = 61/111 (54.95%), Query Frame = 2 Query: 2 PLGILKANLIQFEPKLPEWKLSAIADIGVGNENKIALRFDNVFW-PNVELLGVVAPTSYACG---YFLNLHKATGHPVLVYMAAGRFAYDLEKLSDESAANFVMMQLKKMF 322 PLG+LK+ I FEP+LPE KL AI +G G NK+A+ F +VFW ++ G + G F + H +G VL+ + AG A + EK+ A + V+ LK ++ Sbjct: 405 PLGVLKSRSIIFEPELPERKLEAIQRLGFGLLNKVAMVFPHVFWDEEIDTFGCLNKERSKRGEFFLFYSYHTVSGGAVLIALVAGEAALEFEKVDPAVALHRVLGILKGIY 515 The following BLAST results are available for this feature:
BLAST of FC922036 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC922036 ID=FC922036; Name=FC922036; organism=Citrus sinensis; type=EST; length=345bpback to top |