CX046252
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX046252 vs. ExPASy Swiss-Prot
Match: RD21A_ARATH (Cysteine proteinase RD21a OS=Arabidopsis thaliana GN=RD21A PE=1 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 5.360e-39 Identity = 59/85 (69.41%), Postives = 75/85 (88.24%), Query Frame = -3 Query: 275 CDNYYSCPESNTCCCVFEYGNSCFAWGCCPLEAATCCDDHYSCCPHDYPICNVRAGTCLMSKDNPLGVRALRRTPAKPYWAHGNQ 529 CD+YY+CPESNTCCC+FEYG CFAWGCCPLEAATCCDD+YSCCPH+YP+C++ GTCL+SK++P V+AL+R PA P+W+ G + Sbjct: 375 CDSYYTCPESNTCCCLFEYGKYCFAWGCCPLEAATCCDDNYSCCPHEYPVCDLDQGTCLLSKNSPFSVKALKRKPATPFWSQGRK 459
BLAST of CX046252 vs. ExPASy Swiss-Prot
Match: ORYA_ORYSJ (Oryzain alpha chain OS=Oryza sativa subsp. japonica GN=Os04g0650000 PE=1 SV=2) HSP 1 Score: 160.614 bits (405), Expect = 5.360e-39 Identity = 61/79 (77.22%), Postives = 72/79 (91.14%), Query Frame = -3 Query: 296 VCDNYYSCPESNTCCCVFEYGNSCFAWGCCPLEAATCCDDHYSCCPHDYPICNVRAGTCLMSKDNPLGVRALRRTPAKP 532 VCDNYY+CP+S TCCC++EYG C+AWGCCPLE ATCCDDHYSCCPH+YPICNV+ GTCLM+KD+PL V+AL+RT AKP Sbjct: 366 VCDNYYTCPDSTTCCCIYEYGKYCYAWGCCPLEGATCCDDHYSCCPHEYPICNVQQGTCLMAKDSPLAVKALKRTLAKP 444
BLAST of CX046252 vs. ExPASy Swiss-Prot
Match: CYSPL_SOLLC (Low-temperature-induced cysteine proteinase (Fragment) OS=Solanum lycopersicum PE=2 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 1.784e-34 Identity = 57/86 (66.28%), Postives = 66/86 (76.74%), Query Frame = -3 Query: 272 CDNYYSCPESNTCCCVFEYGNSCFAWGCCPLEAATCCDDHYSCCPHDYPICNVRAGTCLMSKDNPLGVRALRRTPAKPYWAHGNQG 529 CD Y C TCCC+ ++ SCF+WGCCPLE ATCC+DHYSCCPHDYPICNVR GTC MSK NPLGV+A++R A+P A GN G Sbjct: 256 CDEYSQCAVGTTCCCILQFRRSCFSWGCCPLEGATCCEDHYSCCPHDYPICNVRQGTCSMSKGNPLGVKAMKRILAQPIGAFGNGG 341
BLAST of CX046252 vs. ExPASy Swiss-Prot
Match: ORYB_ORYSJ (Oryzain beta chain OS=Oryza sativa subsp. japonica GN=Os04g0670200 PE=1 SV=2) HSP 1 Score: 128.642 bits (322), Expect = 2.257e-29 Identity = 50/78 (64.10%), Postives = 60/78 (76.92%), Query Frame = -3 Query: 299 VCDNYYSCPESNTCCCVFEYGNSCFAWGCCPLEAATCCDDHYSCCPHDYPICNVRAGTCLMSKDNPLGVRALRRTPAK 532 VCD+ +SCP +TCCC F + N C WGCCP+E ATCC DH SCCP DYP+CN RAGTC SK++PL V+AL+RT AK Sbjct: 385 VCDDNFSCPAGSTCCCAFGFRNLCLVWGCCPVEGATCCKDHASCCPPDYPVCNTRAGTCSASKNSPLSVKALKRTLAK 462
BLAST of CX046252 vs. ExPASy Swiss-Prot
Match: CYSP1_ORYSJ (Cysteine protease 1 OS=Oryza sativa subsp. japonica GN=CP1 PE=2 SV=2) HSP 1 Score: 105.916 bits (263), Expect = 1.567e-22 Identity = 40/82 (48.78%), Postives = 50/82 (60.98%), Query Frame = -3 Query: 296 CDNYYSCPESNTCCCVFEYGNSCFAWGCCPLEAATCCDDHYSCCPHDYPICNVRAGTCLMSKDNPLGVRA----LRRTPAKP 529 CD Y CP TCCC + N C WGCCP+E ATCC DH +CCP +YP+CN +A TC SK++P +R R P +P Sbjct: 395 CDRYSKCPAGTTCCCNYGIRNHCIVWGCCPVEGATCCKDHSTCCPKEYPVCNAKARTCSKSKNSPYNIRTPAAMARSVPEQP 476 The following BLAST results are available for this feature:
BLAST of CX046252 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX046252 ID=CX046252; Name=CX046252; organism=Citrus sinensis; type=EST; length=597bpback to top |