DN617402
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN617402 vs. ExPASy Swiss-Prot
Match: ATPX_SPIOL (ATP synthase subunit b', chloroplastic OS=Spinacia oleracea GN=ATPG PE=1 SV=2) HSP 1 Score: 188.348 bits (477), Expect = 3.961e-47 Identity = 102/150 (68.00%), Postives = 114/150 (76.00%), Query Frame = 3 Query: 231 PSLAAEIEKAALFDFNLTLPIIMVEFLVLMFALDKIYYSPLGNFMDERDNAIKEKLNSVKDTSEEVKQLEEQXXXXXXXXXXXXXXXLTKMKKETQLEVEQKLAVGRKKIXXXXXXXXXXXXRQKEDTIKSLDSQIAALSEEIVRKVLPV 680 PSLA EIEKA+LFDFNLTLPIIM EFL LMFALDKIYY+PLG+FMD+RD +IKE+L+ VKDTS EVKQLEEQ L KMKKETQLEVE KLA GRKKI +QKEDTIKSLDSQI+ALS++IV+KVLPV Sbjct: 72 PSLAEEIEKASLFDFNLTLPIIMAEFLFLMFALDKIYYTPLGDFMDKRDASIKEQLSGVKDTSSEVKQLEEQANAVMRAARAEISAALNKMKKETQLEVEAKLAEGRKKIEVELQEALGSLEQQKEDTIKSLDSQISALSDDIVKKVLPV 221
BLAST of DN617402 vs. ExPASy Swiss-Prot
Match: ATPX_CHLRE (ATP synthase subunit b', chloroplastic OS=Chlamydomonas reinhardtii GN=ATPG PE=1 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 6.590e-18 Identity = 48/148 (32.43%), Postives = 80/148 (54.05%), Query Frame = 3 Query: 234 SLAAEIEKAALFDFNLTLPIIMVEFLVLMFALDKIYYSPLGNFMDERDNAIKEKLNSVKDTSEEVKQLEEQXXXXXXXXXXXXXXXLTKMKKETQLEVEQKLAVGRKKIXXXXXXXXXXXXRQKEDTIKSLDSQIAALSEEIVRKVLP 677 ++ A E +FDFNLTLP++ EFL+LM L+K +++P+G +DERDN I+ KL SVKD + +V +L + + K Q E+++ + KI ++ +KSLD+Q+ +S E++++VLP Sbjct: 57 AMPAAAEAGKIFDFNLTLPVMAGEFLLLMVFLEKTWFTPVGKVLDERDNLIRSKLGSVKDNTGDVDKLVLEAETILKSARSDVSAMINTKKAAKQSELDKTYNEAKAKITAEVESSIAGLEQESASMLKSLDAQVDKISAEVLKRVLP 204
BLAST of DN617402 vs. ExPASy Swiss-Prot
Match: ATPX_TRIEI (ATP synthase subunit b' OS=Trichodesmium erythraeum (strain IMS101) GN=atpG PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 6.168e-16 Identity = 46/141 (32.62%), Postives = 72/141 (51.06%), Query Frame = 3 Query: 252 EKAALFDFNLTLPIIMVEFLVLMFALDKIYYSPLGNFMDERDNAIKEKLNSVKDTSEEVKQLEEQXXXXXXXXXXXXXXXLTKMKKETQLEVEQKLAVGRKKIXXXXXXXXXXXXRQKEDTIKSLDSQIAALSEEIVRKVL 674 EK LFD N TLP++ ++FL+L F LDKI+Y PLG +D R + I+E K+ + KQL EQ + + E + K+AV +K+ +QKE ++ L+ Q+ +LS +I+ K+L Sbjct: 15 EKGGLFDINATLPLMAIQFLLLAFVLDKIFYKPLGKAIDSRADYIRENQVKAKERLAKAKQLAEQYEQEFAQTRQKSQVVIVAAQAEAEKIAATKVAVAQKEAQVKREQAAQEIEKQKEVALEQLEEQVDSLSRQILEKLL 155
BLAST of DN617402 vs. ExPASy Swiss-Prot
Match: ATPX_CYAPA (ATP synthase B' chain, cyanelle OS=Cyanophora paradoxa GN=atpG PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.384e-14 Identity = 48/153 (31.37%), Postives = 73/153 (47.71%), Query Frame = 3 Query: 237 LAAEIEKA----ALFDFNLTLPIIMVEFLVLMFALDKIYYSPLGNFMDERDNAIKEKLNSVKDTSEEVKQLEEQXXXXXXXXXXXXXXXLTKMKKETQLEVEQKLAVGRKKIXXXXXXXXXXXXRQKEDTIKSLDSQIAALSEEIVRKVLPVQ 683 LA E E A LFDF+ TLP++MV+ LVLM L+ ++Y PL +DER I+ N + + +L Q + E Q V +KL +KK QK++ +KSL+S++ LS +I+ K+L +Q Sbjct: 8 LAIETEAAKPEGGLFDFDATLPVMMVQLLVLMLILNAVFYKPLIKILDERKEYIQSNFNEAEKCLAQAAELTTQYETKITDARQNASKLTNTTRSEIQRFVSEKLEEAQKKADSELASATNKLELQKDEALKSLESEVQTLSTKILEKLLGIQ 160
BLAST of DN617402 vs. ExPASy Swiss-Prot
Match: ATPX_SYNP1 (ATP synthase subunit b' OS=Synechococcus sp. (strain PCC 6716) GN=atpG PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.742e-13 Identity = 39/148 (26.35%), Postives = 75/148 (50.68%), Query Frame = 3 Query: 231 PSLAAEIEKAALFDFNLTLPIIMVEFLVLMFALDKIYYSPLGNFMDERDNAIKEKLNSVKDTSEEVKQLEEQXXXXXXXXXXXXXXXLTKMKKETQLEVEQKLAVGRKKIXXXXXXXXXXXXRQKEDTIKSLDSQIAALSEEIVRKVL 674 P L I + +FDF+ TLP++ V+FL+L L+ + Y PLG +D RD I+ L K+ ++ +L Q + + + E Q ++A ++ + +QK+ T+++L+ Q+++LSE+++ K+L Sbjct: 11 PLLFRPILERLMFDFDATLPLMAVQFLILTVILNALLYKPLGQALDNRDEYIRTNLQQAKERLQQATELANQYEQELAYTRREAQAIIEEARAEAQKIATAEIAAAQQALQAELMKAQAEIDQQKQATLQALEGQVSSLSEQLLAKLL 158
BLAST of DN617402 vs. ExPASy Swiss-Prot
Match: ATPX_RHDSA (ATP synthase subunit b', chloroplastic OS=Rhodomonas salina GN=atpG PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 8.336e-13 Identity = 39/145 (26.90%), Postives = 72/145 (49.66%), Query Frame = 3 Query: 249 IEKAALFDFNLTLPIIMVEFLVLMFALDKIYYSPLGNFMDERDNAIKEKLNSVKDTSEEVKQLEEQXXXXXXXXXXXXXXXLTKMKKETQLEVEQKLAVGRKKIXXXXXXXXXXXXRQKEDTIKSLDSQIAALSEEIVRKVLPVQ 683 + + LFDFN TLP+++++ L+LM L+ I+Y+P+ +DERD I++ L +T + + + +Q + ++E Q V ++ +K QKE +++L+ Q+ LSE+I K+L Q Sbjct: 8 LAEGGLFDFNATLPLMVLQILLLMVVLNAIFYTPIARVLDERDEYIRKNLTQASETLAKAEAITKQYEQDLAKERRDAQMIIASSQQEAQEIVAMEIKQAQKDTELLVNEATTQLNSQKEKALQALEKQVNTLSEQIKNKLLSGQ 152
BLAST of DN617402 vs. ExPASy Swiss-Prot
Match: ATPX_THEEB (ATP synthase subunit b' OS=Thermosynechococcus elongatus (strain BP-1) GN=atpG PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.089e-12 Identity = 36/137 (26.28%), Postives = 72/137 (52.55%), Query Frame = 3 Query: 264 LFDFNLTLPIIMVEFLVLMFALDKIYYSPLGNFMDERDNAIKEKLNSVKDTSEEVKQLEEQXXXXXXXXXXXXXXXLTKMKKETQLEVEQKLAVGRKKIXXXXXXXXXXXXRQKEDTIKSLDSQIAALSEEIVRKVL 674 +FDF+ TLP++ V+FL+L L+ + Y PLG +D RD I+ L K+ ++ +L +Q + + + E Q ++A ++ + +QK+ T+++L+ Q+A+LSE+++ K++ Sbjct: 1 MFDFDATLPLMAVQFLILTVILNALLYKPLGQALDNRDEYIRTNLQQAKERLQQATELAQQYEQELASTRRQAQALIEEARVEAQKIATAEIAEAQQAVQAELLKIQAEIDQQKQATLQALEGQVASLSEQLLAKLM 137
BLAST of DN617402 vs. ExPASy Swiss-Prot
Match: ATPX_PORPU (ATP synthase subunit b', chloroplastic OS=Porphyra purpurea GN=atpG PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.168e-12 Identity = 42/151 (27.81%), Postives = 71/151 (47.02%), Query Frame = 3 Query: 231 PSLAAEIEKAALFDFNLTLPIIMVEFLVLMFALDKIYYSPLGNFMDERDNAIKEKLNSVKDTSEEVKQLEEQXXXXXXXXXXXXXXXLTKMKKETQLEVEQKLAVGRKKIXXXXXXXXXXXXRQKEDTIKSLDSQIAALSEEIVRKVLPVQ 683 P L AE + LFDFN TLP++ ++FL+LM L+ I+Y P+ +DERD I+ L + + +L + + +K+ Q V + + + QKE+ +K+L+ Q+ LS++I K+L Q Sbjct: 5 PLLLAEEIEGGLFDFNGTLPLMALQFLILMLLLNTIFYKPVTKILDERDEYIRTTLTTASSMLVKADELAAKYEEDLSKARRDAQAKIAASQKDAQSIVSEDIKKAQMNAEKLITEASKQLNIQKEEALKTLEDQVDTLSDQIKTKLLSSQ 155
BLAST of DN617402 vs. ExPASy Swiss-Prot
Match: ATPX_SYNP2 (ATP synthase subunit b' OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=atpG PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 5.403e-12 Identity = 43/150 (28.67%), Postives = 74/150 (49.33%), Query Frame = 3 Query: 237 LAAE-IEKAA---LFDFNLTLPIIMVEFLVLMFALDKIYYSPLGNFMDERDNAIKEKLNSVKDTSEEVKQLEEQXXXXXXXXXXXXXXXLTKMKKETQLEVEQKLAVGRKKIXXXXXXXXXXXXRQKEDTIKSLDSQIAALSEEIVRKVL 674 LA E +EK A LFDF+ TLP++ ++FLVL L+K++Y P+G +D+R + I+ L K+ ++ + L Q + K + E Q V ++ + + Q+E KSL+ Q+ +LS+ I K++ Sbjct: 8 LATEAVEKTAEGGLFDFDATLPVMAIQFLVLAALLNKLFYKPIGQAIDDRSDYIRTNLVDAKERQQKAEDLAAQYEQELRDVRREAQDVIAKAQAEAQKVVADEVKSAQAEALAEREKAALEIEAQRESAFKSLEQQVDSLSQAIASKLV 157
BLAST of DN617402 vs. ExPASy Swiss-Prot
Match: ATPX_PORYE (ATP synthase subunit b', chloroplastic OS=Porphyra yezoensis GN=atpG PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 9.217e-12 Identity = 43/151 (28.48%), Postives = 71/151 (47.02%), Query Frame = 3 Query: 231 PSLAAEIEKAALFDFNLTLPIIMVEFLVLMFALDKIYYSPLGNFMDERDNAIKEKLNSVKDTSEEVKQLEEQXXXXXXXXXXXXXXXLTKMKKETQLEVEQKLAVGRKKIXXXXXXXXXXXXRQKEDTIKSLDSQIAALSEEIVRKVLPVQ 683 P L AE + LFDFN TLP++ ++FL LM L+ I+Y P+ +DERD I+ L + + +L + + +KE Q V + + + QKE+ +K+L++Q+ LS++I K+L Q Sbjct: 5 PFLLAEEIEGGLFDFNGTLPLMALQFLTLMVLLNTIFYKPVTKVLDERDEYIRTTLTTASSMLVKADELAAKYEEDLSEARRNAQLKIASSQKEAQNIVSEDIKKAQLNAEKLIAEASKQLNVQKEEALKTLENQVDTLSDQIKVKLLSSQ 155 The following BLAST results are available for this feature:
BLAST of DN617402 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617402 ID=DN617402; Name=DN617402; organism=Citrus sinensis; type=EST; length=787bpback to top |