DN617365
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617365 vs. ExPASy Swiss-Prot
Match: NOLC1_RAT (Nucleolar and coiled-body phosphoprotein 1 OS=Rattus norvegicus GN=Nolc1 PE=1 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 8.483e-18 Identity = 53/141 (37.59%), Postives = 80/141 (56.74%), Query Frame = -1 Query: 104 EKDSEPNDKMEVEESKRRKTEGSEELKIN---DDQVNGTDKNEEKSAPNKTRKKQANGSAEPKSVKAFQRVKVDEVEFTDERLKDNSYWAKDGAEIGYGAKAQEVLGQVRGRDFRHEKTKKKRGSYRGGQIDLQSHSVKFN 517 E + E D + +++ K ++ K N D+ K + PN K++ E ++ F+RV+ +E+E D R+ DNS+ AK GA +G +A +VL +G+ FRHEKTKKKRGSYRGG I +Q +SVKF+ Sbjct: 566 ESEEEEEDTEQNKKAAGTKPGSGKKRKHNETADEAATPQSKKVKLQTPNTFPKRK---KGEKRASSPFRRVREEEIE-VDSRVADNSFDAKRGAAGDWGERANQVLKFTKGKSFRHEKTKKKRGSYRGGSISVQVNSVKFD 702
BLAST of DN617365 vs. ExPASy Swiss-Prot
Match: NOLC1_HUMAN (Nucleolar and coiled-body phosphoprotein 1 OS=Homo sapiens GN=NOLC1 PE=1 SV=2) HSP 1 Score: 88.9669 bits (219), Expect = 1.447e-17 Identity = 52/137 (37.96%), Postives = 76/137 (55.47%), Query Frame = -1 Query: 104 NDKMEVEESKRRKTEGSEELKINDDQVNGTDKNEEKSAPNKTRKKQANG-----SAEPKSVKAFQRVKVDEVEFTDERLKDNSYWAKDGAEIGYGAKAQEVLGQVRGRDFRHEKTKKKRGSYRGGQIDLQSHSVKFN 499 N + E EE K+ S+ + + N K E K + + N E ++ F+RV+ +E+E D R+ DNS+ AK GA +G +A +VL +G+ FRHEKTKKKRGSYRGG I +Q +S+KF+ Sbjct: 562 NSEEEEEEKKKAAVVVSKSGSLKKRKQNEAAKEAETPQAKKIKLQTPNTFPKRKKGEKRASSPFRRVREEEIE-VDSRVADNSFDAKRGAAGDWGERANQVLKFTKGKSFRHEKTKKKRGSYRGGSISVQVNSIKFD 697
BLAST of DN617365 vs. ExPASy Swiss-Prot
Match: SRP40_YEAST (Suppressor protein SRP40 OS=Saccharomyces cerevisiae GN=SRP40 PE=1 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 4.817e-13 Identity = 47/137 (34.31%), Postives = 68/137 (49.64%), Query Frame = -1 Query: 107 EKDSEPNDKMEVEESKRRKTEGSEELKINDDQVNGTDKNEEKSAPNKTRKKQANGSAEPKSVKAFQRVKVDEVEFTDERLKDNSYWAKDGAEIGYGAKAQEVLGQVRGRDFRHEKTKKKRGSYRGGQIDLQSHSVKF 517 + DS + ++E +E+ +++ E +++ T S+ NK + K F RV ++ F L DN+Y GA +G KA E LG+VRG+DF K K KRGSYRGG I L+S S KF Sbjct: 274 DSDSGSSSELETKEATADESKAEETPASSNES---TPSASSSSSANKLNIPAGTDEIKEGQRKHFSRVDRSKINFEAWELTDNTY---KGAAGTWGEKANEKLGRVRGKDFTKNKNKMKRGSYRGGSITLESGSYKF 404 The following BLAST results are available for this feature:
BLAST of DN617365 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DN617365 ID=DN617365; Name=DN617365; organism=Citrus sinensis; type=EST; length=517bpback to top |