DN135188

Overview
NameDN135188
Unique NameDN135188
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length687
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN135188 vs. ExPASy Swiss-Prot
Match: LEA5_CITSI (Late embryogenesis abundant protein Lea5 OS=Citrus sinensis GN=LEA5 PE=2 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 1.861e-47
Identity = 95/97 (97.94%), Postives = 95/97 (97.94%), Query Frame = 1
Query:  160 MARSLFKAKLLLAPVADGISLSIGRRGYAAAAPLGTISRTGIMEKNDLTPAVREDSGASSAWAPDPITGYYRPENRAVEIDPAELREMLLNHKVRAH 450
            MARSLFKAKLLLAPVADGISLSI RRGYAAAAPLGTISRTGIMEKNDL PAVREDSGASSAWAPDPITGYYRPENRAVEIDPAELREMLLNHKVRAH
Sbjct:    1 MARSLFKAKLLLAPVADGISLSISRRGYAAAAPLGTISRTGIMEKNDLRPAVREDSGASSAWAPDPITGYYRPENRAVEIDPAELREMLLNHKVRAH 97          
BLAST of DN135188 vs. ExPASy Swiss-Prot
Match: LEA5D_GOSHI (Late embryogenesis abundant protein Lea5-D OS=Gossypium hirsutum GN=LEA5-D PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.991e-21
Identity = 56/104 (53.85%), Postives = 69/104 (66.35%), Query Frame = 1
Query:  160 MARSLFKAKLLLAPVADGISLSIGRRGYAAAAPLG---TISRTGIMEKNDLTPAVREDSGA-----SSAWAPDPITGYYRPENRAVEIDPAELREMLLNHKVRA 447
            MARS+   KLL A + DG+ +SI RRGY+ A P     +  R G M K +   A++E S +     SSAWAPDP+TGYYRPEN   EID AELREMLLNH+VR+
Sbjct:    1 MARSVSSFKLLGASIFDGLYVSISRRGYSGAPPAAVTASFGRPGAMGKVERRDAMKESSSSETRAYSSAWAPDPVTGYYRPENCGAEIDAAELREMLLNHRVRS 104          
BLAST of DN135188 vs. ExPASy Swiss-Prot
Match: LEA5A_GOSHI (Late embryogenesis abundant protein Lea5-A OS=Gossypium hirsutum GN=LEA5-A PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.144e-19
Identity = 53/104 (50.96%), Postives = 67/104 (64.42%), Query Frame = 1
Query:  160 MARSLFKAKLLLAPVADGISLSIGRRGYAAAAPLG---TISRTGIMEKNDLTPAVREDSGA-----SSAWAPDPITGYYRPENRAVEIDPAELREMLLNHKVRA 447
            MARS+   K L A V D + +SI RRGY+ A P     +  R G M K +   A++E S +     SSAWAPDP+TGYYRPEN   EID A+LREM+LNH+VR+
Sbjct:    1 MARSVSSFKFLGASVFDALYVSISRRGYSGAPPAAVTASFGRPGAMGKVERRYAMKESSSSETRAYSSAWAPDPVTGYYRPENCGAEIDAADLREMMLNHRVRS 104          
BLAST of DN135188 vs. ExPASy Swiss-Prot
Match: ARG2_PHAAU (Indole-3-acetic acid-induced protein ARG2 OS=Phaseolus aureus GN=ARG2 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.165e-11
Identity = 42/97 (43.30%), Postives = 55/97 (56.70%), Query Frame = 1
Query:  160 MARSLFKAKLLLAPVADGISLSIGRRGYAAAAPLG-TISRTGIMEKNDLTPAVREDS---GASSAWAPDPITGYYRPENRAVEIDPAELREMLLNHK 438
            MARS    K+L A VADG S +  R G+AAAA    + +R G     ++ P   E+    G   +W PDP+TGYYRPEN   EID A++R  +L  K
Sbjct:    1 MARSFTNVKVLSALVADGFSNTTTRHGFAAAAAATQSATRGGASIGGNMVPKSGEEKVRGGEKVSWVPDPVTGYYRPEN-TNEIDVADMRATVLGKK 96          
The following BLAST results are available for this feature:
BLAST of DN135188 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
LEA5_CITSI1.861e-4797.94Late embryogenesis abundant protein Lea5 OS=Citrus... [more]
LEA5D_GOSHI2.991e-2153.85Late embryogenesis abundant protein Lea5-D OS=Goss... [more]
LEA5A_GOSHI2.144e-1950.96Late embryogenesis abundant protein Lea5-A OS=Goss... [more]
ARG2_PHAAU8.165e-1143.30Indole-3-acetic acid-induced protein ARG2 OS=Phase... [more]
back to top
Properties
Property NameValue
Genbank descriptionwca07e10 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone wca07e10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN135188 ID=DN135188; Name=DN135188; organism=Citrus sinensis; type=EST; length=687bp
GCCGGGGGCCTCACAANNNCAGCACAAAGAGNNNNANNNNCTAGCTTTTG
CCTATAGCTACTGCAGGAGCAGAATCTTTCTTCTTCTGTAGTAGCACTGT
ACAGAAACATCCCAGCTAGCTATCTTCATATCTATTAAGTTCTATAAGTA
AATAAAACAATGGCCCGCTCTCTCTTCAAAGCTAAGCTTCTTCTTGCTCC
TGTTGCTGATGGCATCTCGCTCTCCATTGGCAGGAGAGGATATGCTGCAG
CAGCACCCTTGGGAACCATATCTCGGACTGGTATCATGGAGAAAAATGAT
TTGACGCCTGCGGTGAGAGAGGATTCTGGGGCCTCTTCTGCCTGGGCCCC
AGATCCCATCACTGGGTACTACAGGCCGGAGAATCGGGCGGTCGAGATTG
ATCCAGCAGAGCTTCGAGAGATGCTGTTGAACCACAAAGTCAGGGCACAC
TAGGGAGTGGTCGCGCATAGCAGCAGATCCTTTGCTGTTAGCGGTGCTTT
AACTTTTAAGTGATGTTGTTACAGTAGCAATTTTGACTCACTCTAAAGTC
TTTGCTGTTGTTTTGATATCAACTGTTATTTACAACTTTTAATAGTGCAT
TTCCATGATTTTGTCTCTATTAACTTGTCAATAAAAGTAAAGAATGCCTG
TATTGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
back to top