CX044428

Overview
NameCX044428
Unique NameCX044428
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length654
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX044428 vs. ExPASy Swiss-Prot
Match: AB11G_ARATH (ABC transporter G family member 11 OS=Arabidopsis thaliana GN=ABCG11 PE=1 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 2.436e-54
Identity = 115/229 (50.22%), Postives = 149/229 (65.07%), Query Frame = 3
Query:    6 KGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIITSIHQPSSEVFQLFHNLCLLSSGQTVYFGPASAANEFFALNGFPCPTLQNPSDHFLKTINKDFQEDIEKGLAG--------------VVPTQEAIDILTKSYKSSDSYLQVRSQVAEICKAQDSGALEKKSTHADFLTQCIVLTSRSFVNMYRDLGYYWFRLGVYVLL 650
            +G+SGG+KRRVSI +E+L RP+LLFLDEPTSGLDSA++++V   +  L +       RT+I SIHQPSSEVF+LF  L LLS G+TVYFG AS A EFFA  GFPCP L+NPSDHFL+ IN DF + +   L G               + T EAI +L   Y +SD Y   +++V EI + + +  L+   + A FL Q   LT RSF+NM RD GYYW RL +Y+L+
Sbjct:  191 RGISGGEKRRVSIALEILMRPRLLFLDEPTSGLDSASAFFVTQTLRALSR-----DGRTVIASIHQPSSEVFELFDRLYLLSGGKTVYFGQASDAYEFFAQAGFPCPALRNPSDHFLRCINSDF-DKVRATLKGSMKLRFEASDDPLEKITTAEAIRLLVDYYHTSDYYYTAKAKVEEISQFKGT-ILDSGGSQASFLLQTYTLTKRSFINMSRDFGYYWLRLLIYILV 412          
BLAST of CX044428 vs. ExPASy Swiss-Prot
Match: AB12G_ARATH (ABC transporter G family member 12 OS=Arabidopsis thaliana GN=ABCG12 PE=1 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 8.968e-49
Identity = 104/232 (44.83%), Postives = 151/232 (65.09%), Query Frame = 3
Query:    3 AKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIITSIHQPSSEVFQLFHNLCLLSSGQTVYFGPASAANEFFALNGFPCPTLQNPSDHFLKTINKDFQEDIEKGLAGV---------------VPTQEAIDILTKSYKSSDSYLQVRSQVAEICKAQDSGALE-KKSTHADFLTQCIVLTSRSFVNMYRDLGYYWFRLGVYVLL 650
            ++G+SGG+++RVS+ +E+LTRP++LFLDEPTSGLDSA++++V+  +  +  RD   G RT+++SIHQPSSEVF LF +L LLSSG+TVYFG +  A EFFA  GFPCP  +NPSDHFL+ IN DF + +   L G                + T E    L ++Y+ S      +S++ E+   +    +E +K + A +  Q   LT RSFVNM RD+GYYW R+ +Y+++
Sbjct:  165 SRGVSGGERKRVSVALEILTRPQILFLDEPTSGLDSASAFFVIQALRNI-ARD---GGRTVVSSIHQPSSEVFALFDDLFLLSSGETVYFGESKFAVEFFAEAGFPCPKKRNPSDHFLRCINSDF-DTVTATLKGSQRIRETPATSDPLMNLATSEIKARLVENYRRSVYAKSAKSRIRELASIEGHHGMEVRKGSEATWFKQLRTLTKRSFVNMCRDIGYYWSRIVIYIVV 391          
BLAST of CX044428 vs. ExPASy Swiss-Prot
Match: AB15G_ARATH (ABC transporter G family member 15 OS=Arabidopsis thaliana GN=ABCG15 PE=2 SV=2)

HSP 1 Score: 190.66 bits (483), Expect = 5.813e-48
Identity = 105/231 (45.45%), Postives = 151/231 (65.37%), Query Frame = 3
Query:    3 AKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIITSIHQPSSEVFQLFHNLCLLSSGQTVYFGPASAANEFFALNGFPCPTLQNPSDHFLKTINKDFQEDIEKGLAGVVPTQE-----------AIDI----LTKSYKSSDSYLQVRSQVAEICKAQDSGALEKKSTHADFLTQCIVLTSRSFVNMYRDLGYYWFRLGVYVLL 650
            A+G+SGG+++RVSI +E+LTRP++LFLDEPTSGLDSA++++V+  +  +  RD     RT+I+S+HQPSSEVF LF +L LLSSG++VYFG A +A EFFA +GFPCP  +NPSDHFL+ IN DF + +   L G    QE           A  +    L ++YK S      +S++ E+   +      +K + A +  Q   LT+RSF+NM RD+GYYW R+  Y+++
Sbjct:  166 ARGVSGGERKRVSIALEILTRPQILFLDEPTSGLDSASAFFVIQALRNI-ARD----GRTVISSVHQPSSEVFALFDDLFLLSSGESVYFGEAKSAVEFFAESGFPCPKKRNPSDHFLRCINSDF-DTVTATLKGSQRIQETPATSDPLMNLATSVIKARLVENYKRSKYAKSAKSRIRELSNIEGLEMEIRKGSEATWWKQLRTLTARSFINMCRDVGYYWTRIISYIVV 390          
BLAST of CX044428 vs. ExPASy Swiss-Prot
Match: AB13G_ARATH (ABC transporter G family member 13 OS=Arabidopsis thaliana GN=ABCG13 PE=2 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 2.209e-47
Identity = 100/240 (41.67%), Postives = 144/240 (60.00%), Query Frame = 3
Query:    6 KGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIITSIHQPSSEVFQLFHNLCLLSSGQTVYFGPASAANEFFALNGFPCPTLQNPSDHFLKTINKDFQEDIEKGLA-------------------------GVVPTQEAIDILTKSYKSSDSYLQVRSQVAEICKAQDSGALEKKSTHADFLTQCIVLTSRSFVNMYRDLGYYWFRLGVYVLL 650
            +G+SGG+K+R+SI +E+LT+P LLFLDEPTSGLDSA++++V+  +     R+     +T+++SIHQPS EVF LF +L LLS G+TVYFG A +A +FF   GFPCP+ +NPSDHFL+ +N DF +++   L                            +PT E    L + +K S      R+++ EI          KK +  ++  Q  +LT RSF+NM RDLGYYW R+ VY++L
Sbjct:  152 RGISGGEKKRLSIALEVLTKPSLLFLDEPTSGLDSASAFFVVQIL-----RNIASSGKTVVSSIHQPSGEVFALFDDLLLLSGGETVYFGEAESATKFFGEAGFPCPSRRNPSDHFLRCVNSDF-DNVTAALVESRRINDSSFSLHQLHETTNTLDPLDDIPTAEIRTTLVRKFKCSLYAAASRARIQEIASIVGIVTERKKGSQTNWWKQLRILTQRSFINMSRDLGYYWMRIAVYIVL 385          
BLAST of CX044428 vs. ExPASy Swiss-Prot
Match: AB3G_ARATH (ABC transporter G family member 3 OS=Arabidopsis thaliana GN=ABCG3 PE=1 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 2.801e-34
Identity = 88/225 (39.11%), Postives = 127/225 (56.44%), Query Frame = 3
Query:    6 KGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIITSIHQPSSEVFQLFHNLCLLSSGQTVYFGPASAANEFFALNGFPCPTLQNPSDHFLKTINKDF----------QEDIEKGLAGVVPTQEAIDILTKSYKSSDSYLQVRSQVAEICKAQDSGALEKKSTHADFLTQCIVLTSRSFVNMYRDLGYYWFRLGVYVLL 650
            KGL  G++RRVSI  E++ RP +LF+DEP   LDS ++  +M  + KL          T++ +I+Q S+EVF LF  +CLLS+G T++FG   A  + F+  GFPCP +Q+PSDHFL+ IN DF          Q+D     A  + T  AI  L  +YKSS     V + + ++ + +  G   K    A   T+  VLT RS + M R+  YYW RL +Y++L
Sbjct:  254 KGLRSGERRRVSIARELVMRPHILFIDEPLYHLDSVSALLMMVTLKKLASM-----GCTLVFTIYQSSTEVFGLFDRICLLSNGNTLFFGETLACLQHFSNAGFPCPIMQSPSDHFLRAINTDFDRIIAMCKNWQDDNGDFSAVNMDTAVAIRTLEATYKSSADADSVEAMIIKLTERE--GTQLKSKGKAGAATRVAVLTWRSLLVMSREWKYYWLRLILYMIL 471          
BLAST of CX044428 vs. ExPASy Swiss-Prot
Match: ABCG1_DICDI (ABC transporter G family member 1 OS=Dictyostelium discoideum GN=abcG1 PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 3.543e-29
Identity = 61/129 (47.29%), Postives = 87/129 (67.44%), Query Frame = 3
Query:    6 KGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIITSIHQPSSEVFQLFHNLCLLSSGQTVYFGPASAANEFFALNGFPCPTLQNPSDHFLKTINKDFQEDIE 392
            +G+SGG++RRV+I IE+LT P ++ LDEPTSGLD++ S+YVMS + KL +       RTII +IHQP S ++ +F NL LL  G T+Y+G A+ A E+F  NG+ C    NP+D FL  IN   ++  +
Sbjct:  262 RGISGGERRRVTISIELLTGPSVILLDEPTSGLDASTSFYVMSALKKLAK-----SGRTIICTIHQPRSNIYDMFDNLLLLGDGNTIYYGKANKALEYFNANGYHCSEKTNPADFFLDLINTQVEDQAD 385          
BLAST of CX044428 vs. ExPASy Swiss-Prot
Match: ABCG2_MOUSE (ATP-binding cassette sub-family G member 2 OS=Mus musculus GN=Abcg2 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 3.316e-27
Identity = 83/234 (35.47%), Postives = 128/234 (54.70%), Query Frame = 3
Query:    6 KGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIITSIHQPSSEVFQLFHNLCLLSSGQTVYFGPASAANEFFALNGFPCPTLQNPSDHFLKTINKDF--------QEDIEKGLAGVVPTQE--AIDILTKSYKSSDSYLQVRSQVAEICKAQDSGALEKKSTHA--------DFLTQCIVLTSRSFVNMYRDLGYYWFRLGVYVLLG 653
            +G+SGG+++R SI +E++T P +LFLDEPT+GLDS+ +  V+  + ++ ++      RTII SIHQP   +F+LF +L LL+SG+ V+ GPA  A E+FA  G+ C    NP+D FL  IN D         ++D E          E   I+ L++ Y +S  Y + ++++ ++      GA EKK T A         F  Q   +  RSF N+  +      +L V V+LG
Sbjct:  183 RGISGGERKRTSIGMELITDPSILFLDEPTTGLDSSTANAVLLLLKRMSKQ-----GRTIIFSIHQPRYSIFKLFDSLTLLASGKLVFHGPAQKALEYFASAGYHCEPYNNPADFFLDVINGDSSAVMLNREEQDNEANKTEEPSKGEKPVIENLSEFYINSAIYGETKAELDQL-----PGAQEKKGTSAFKEPVYVTSFCHQLRWIARRSFKNLLGNPQASVAQLIVTVILG 406          
BLAST of CX044428 vs. ExPASy Swiss-Prot
Match: WHT1_CAEEL (ABC transporter ATP-binding protein/permease wht-1 OS=Caenorhabditis elegans GN=wht-1 PE=2 SV=2)

HSP 1 Score: 121.324 bits (303), Expect = 4.331e-27
Identity = 73/207 (35.27%), Postives = 114/207 (55.07%), Query Frame = 3
Query:    6 KGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIITSIHQPSSEVFQLFHNLCLLSSGQTVYFGPASAANEFFALNGFPCPTLQNPSDHFLKTI------NKDFQEDIEKGLAGVVPTQEAIDILTKSYKSSDSYLQVRSQVAEICKAQDSGALEKKSTHADFLTQCIVLTSRSFVNMYRD 608
            KGLS G+K+R+S   E+LT PK+LF DEPTSGLD+  + +V+  +  L   D+G+   T+I +IHQPSS V+ LF+N+CL++ G+ +Y GP   A   F   G+PCP   NP+DH ++T+           + I K   G + T     +L      + + L+  S V     ++ +     +  +A F TQ + L  RS++ + RD
Sbjct:  135 KGLSCGEKKRLSFASEILTCPKILFCDEPTSGLDAFMAGHVVQALRSL--ADNGM---TVIITIHQPSSHVYSLFNNVCLMACGRVIYLGPGDQAVPLFEKCGYPCPAYYNPADHLIRTLAVIDSDRATSMKTISKIRQGFLSTDLGQSVLA---IGNANKLRAASFVTGSDTSEKTKTFFNQDYNASFWTQFLALFWRSWLTVIRD 333          
BLAST of CX044428 vs. ExPASy Swiss-Prot
Match: ABCG2_RAT (ATP-binding cassette sub-family G member 2 OS=Rattus norvegicus GN=Abcg2 PE=1 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.646e-26
Identity = 79/229 (34.50%), Postives = 126/229 (55.02%), Query Frame = 3
Query:    6 KGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIITSIHQPSSEVFQLFHNLCLLSSGQTVYFGPASAANEFFALNGFPCPTLQNPSDHFLKTINKDF--------QEDIEKGLAGVVPTQE--AIDILTKSYKSSDSYLQVRSQVAEICKAQ---DSGALEKKSTHADFLTQCIVLTSRSFVNMYRDLGYYWFRLGVYVLLG 653
            +G+SGG+++R SI +E++T P +LFLDEPT+GLDS+ +  V+  + ++ ++      RTII SIHQP   +F+LF +L LL+SG+ ++ GPA  A E+FA  G+ C    NP+D FL  IN D         ++D E         +E   I+ L + Y +S  Y + ++++ ++  AQ    S A  +      F  Q   +  RSF N+  +      +L V V+LG
Sbjct:  183 RGISGGERKRTSIGMELITDPSILFLDEPTTGLDSSTANAVLLLLKRMSKQ-----GRTIIFSIHQPRYSIFKLFDSLTLLASGKLMFHGPAQKALEYFASAGYHCEPYNNPADFFLDVINGDSSAVMLNRGEQDHEANKTEEPSKREKPIIENLAEFYINSTIYGETKAELDQLPVAQKKKGSSAFREPVYVTSFCHQLRWIARRSFKNLLGNPQASVAQLIVTVILG 406          
BLAST of CX044428 vs. ExPASy Swiss-Prot
Match: ABCG2_HUMAN (ATP-binding cassette sub-family G member 2 OS=Homo sapiens GN=ABCG2 PE=1 SV=3)

HSP 1 Score: 115.546 bits (288), Expect = 2.376e-25
Identity = 70/210 (33.33%), Postives = 120/210 (57.14%), Query Frame = 3
Query:    6 KGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIITSIHQPSSEVFQLFHNLCLLSSGQTVYFGPASAANEFFALNGFPCPTLQNPSDHFLKTINKDF------QEDIEKGLAGVVPTQE---AIDILTKSYKSSDSYLQVRSQVAEIC---KAQDSGALEKKSTHADFLTQCIVLTSRSFVNM 599
            +G+SGG+++R SI +E++T P +LFLDEPT+GLDS+ +  V+  + ++ ++      RTII SIHQP   +F+LF +L LL+SG+ ++ GPA  A  +F   G+ C    NP+D FL  IN D       +E+  K    + P+++    I+ L + Y +S  Y + ++++ ++    K +     ++ S    F  Q   ++ RSF N+
Sbjct:  184 RGVSGGERKRTSIGMELITDPSILFLDEPTTGLDSSTANAVLLLLKRMSKQ-----GRTIIFSIHQPRYSIFKLFDSLTLLASGRLMFHGPAQEALGYFESAGYHCEAYNNPADFFLDIINGDSTAVALNREEDFKATEIIEPSKQDKPLIEKLAEIYVNSSFYKETKAELHQLSGGEKKKKITVFKEISYTTSFCHQLRWVSKRSFKNL 388          
The following BLAST results are available for this feature:
BLAST of CX044428 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 121
Match NameE-valueIdentityDescription
AB11G_ARATH2.436e-5450.22ABC transporter G family member 11 OS=Arabidopsis ... [more]
AB12G_ARATH8.968e-4944.83ABC transporter G family member 12 OS=Arabidopsis ... [more]
AB15G_ARATH5.813e-4845.45ABC transporter G family member 15 OS=Arabidopsis ... [more]
AB13G_ARATH2.209e-4741.67ABC transporter G family member 13 OS=Arabidopsis ... [more]
AB3G_ARATH2.801e-3439.11ABC transporter G family member 3 OS=Arabidopsis t... [more]
ABCG1_DICDI3.543e-2947.29ABC transporter G family member 1 OS=Dictyostelium... [more]
ABCG2_MOUSE3.316e-2735.47ATP-binding cassette sub-family G member 2 OS=Mus ... [more]
WHT1_CAEEL4.331e-2735.27ABC transporter ATP-binding protein/permease wht-1... [more]
ABCG2_RAT1.646e-2634.50ATP-binding cassette sub-family G member 2 OS=Ratt... [more]
ABCG2_HUMAN2.376e-2533.33ATP-binding cassette sub-family G member 2 OS=Homo... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_17E04_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-17E04-J7-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX044428 ID=CX044428; Name=CX044428; organism=Citrus sinensis; type=EST; length=654bp
GAGCTAAAGGCCTTAGTGGTGGTCAAAAGAGGAGAGTTAGCATTTGCATT
GAAATGTTGACTCGACCAAAGCTTCTATTTCTTGACGAGCCAACAAGCGG
ACTTGATAGTGCTGCTTCATACTATGTAATGAGCAGGATTGCTAAGCTTG
ATCAAAGAGATCATGGAGTGGGATCAAGAACAATAATAACATCAATCCAT
CAACCTAGCAGCGAAGTTTTTCAGCTTTTTCACAACCTTTGCCTTCTTTC
TTCCGGTCAAACTGTCTATTTTGGTCCAGCTTCTGCGGCAAATGAGTTTT
TTGCTTTGAATGGCTTCCCTTGCCCAACCCTCCAGAATCCATCTGATCAC
TTTCTTAAAACTATAAACAAAGATTTCCAGGAGGATATCGAAAAAGGTTT
AGCTGGAGTAGTACCGACCCAGGAAGCAATTGATATTCTTACAAAATCTT
ATAAATCCTCTGACAGCTATCTGCAAGTGCGAAGCCAGGTGGCTGAAATA
TGCAAGGCACAGGATTCTGGAGCTCTGGAGAAAAAGAGTACCCATGCTGA
CTTTCTCACTCAATGCATAGTTCTCACAAGCAGATCTTTTGTGAACATGT
ATCGTGATCTAGGTTACTACTGGTTTCGCCTAGGTGTTTATGTCTTACTG
GGAG
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