CX044428
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX044428 vs. ExPASy Swiss-Prot
Match: AB11G_ARATH (ABC transporter G family member 11 OS=Arabidopsis thaliana GN=ABCG11 PE=1 SV=1) HSP 1 Score: 211.846 bits (538), Expect = 2.436e-54 Identity = 115/229 (50.22%), Postives = 149/229 (65.07%), Query Frame = 3 Query: 6 KGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIITSIHQPSSEVFQLFHNLCLLSSGQTVYFGPASAANEFFALNGFPCPTLQNPSDHFLKTINKDFQEDIEKGLAG--------------VVPTQEAIDILTKSYKSSDSYLQVRSQVAEICKAQDSGALEKKSTHADFLTQCIVLTSRSFVNMYRDLGYYWFRLGVYVLL 650 +G+SGG+KRRVSI +E+L RP+LLFLDEPTSGLDSA++++V + L + RT+I SIHQPSSEVF+LF L LLS G+TVYFG AS A EFFA GFPCP L+NPSDHFL+ IN DF + + L G + T EAI +L Y +SD Y +++V EI + + + L+ + A FL Q LT RSF+NM RD GYYW RL +Y+L+ Sbjct: 191 RGISGGEKRRVSIALEILMRPRLLFLDEPTSGLDSASAFFVTQTLRALSR-----DGRTVIASIHQPSSEVFELFDRLYLLSGGKTVYFGQASDAYEFFAQAGFPCPALRNPSDHFLRCINSDF-DKVRATLKGSMKLRFEASDDPLEKITTAEAIRLLVDYYHTSDYYYTAKAKVEEISQFKGT-ILDSGGSQASFLLQTYTLTKRSFINMSRDFGYYWLRLLIYILV 412
BLAST of CX044428 vs. ExPASy Swiss-Prot
Match: AB12G_ARATH (ABC transporter G family member 12 OS=Arabidopsis thaliana GN=ABCG12 PE=1 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 8.968e-49 Identity = 104/232 (44.83%), Postives = 151/232 (65.09%), Query Frame = 3 Query: 3 AKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIITSIHQPSSEVFQLFHNLCLLSSGQTVYFGPASAANEFFALNGFPCPTLQNPSDHFLKTINKDFQEDIEKGLAGV---------------VPTQEAIDILTKSYKSSDSYLQVRSQVAEICKAQDSGALE-KKSTHADFLTQCIVLTSRSFVNMYRDLGYYWFRLGVYVLL 650 ++G+SGG+++RVS+ +E+LTRP++LFLDEPTSGLDSA++++V+ + + RD G RT+++SIHQPSSEVF LF +L LLSSG+TVYFG + A EFFA GFPCP +NPSDHFL+ IN DF + + L G + T E L ++Y+ S +S++ E+ + +E +K + A + Q LT RSFVNM RD+GYYW R+ +Y+++ Sbjct: 165 SRGVSGGERKRVSVALEILTRPQILFLDEPTSGLDSASAFFVIQALRNI-ARD---GGRTVVSSIHQPSSEVFALFDDLFLLSSGETVYFGESKFAVEFFAEAGFPCPKKRNPSDHFLRCINSDF-DTVTATLKGSQRIRETPATSDPLMNLATSEIKARLVENYRRSVYAKSAKSRIRELASIEGHHGMEVRKGSEATWFKQLRTLTKRSFVNMCRDIGYYWSRIVIYIVV 391
BLAST of CX044428 vs. ExPASy Swiss-Prot
Match: AB15G_ARATH (ABC transporter G family member 15 OS=Arabidopsis thaliana GN=ABCG15 PE=2 SV=2) HSP 1 Score: 190.66 bits (483), Expect = 5.813e-48 Identity = 105/231 (45.45%), Postives = 151/231 (65.37%), Query Frame = 3 Query: 3 AKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIITSIHQPSSEVFQLFHNLCLLSSGQTVYFGPASAANEFFALNGFPCPTLQNPSDHFLKTINKDFQEDIEKGLAGVVPTQE-----------AIDI----LTKSYKSSDSYLQVRSQVAEICKAQDSGALEKKSTHADFLTQCIVLTSRSFVNMYRDLGYYWFRLGVYVLL 650 A+G+SGG+++RVSI +E+LTRP++LFLDEPTSGLDSA++++V+ + + RD RT+I+S+HQPSSEVF LF +L LLSSG++VYFG A +A EFFA +GFPCP +NPSDHFL+ IN DF + + L G QE A + L ++YK S +S++ E+ + +K + A + Q LT+RSF+NM RD+GYYW R+ Y+++ Sbjct: 166 ARGVSGGERKRVSIALEILTRPQILFLDEPTSGLDSASAFFVIQALRNI-ARD----GRTVISSVHQPSSEVFALFDDLFLLSSGESVYFGEAKSAVEFFAESGFPCPKKRNPSDHFLRCINSDF-DTVTATLKGSQRIQETPATSDPLMNLATSVIKARLVENYKRSKYAKSAKSRIRELSNIEGLEMEIRKGSEATWWKQLRTLTARSFINMCRDVGYYWTRIISYIVV 390
BLAST of CX044428 vs. ExPASy Swiss-Prot
Match: AB13G_ARATH (ABC transporter G family member 13 OS=Arabidopsis thaliana GN=ABCG13 PE=2 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 2.209e-47 Identity = 100/240 (41.67%), Postives = 144/240 (60.00%), Query Frame = 3 Query: 6 KGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIITSIHQPSSEVFQLFHNLCLLSSGQTVYFGPASAANEFFALNGFPCPTLQNPSDHFLKTINKDFQEDIEKGLA-------------------------GVVPTQEAIDILTKSYKSSDSYLQVRSQVAEICKAQDSGALEKKSTHADFLTQCIVLTSRSFVNMYRDLGYYWFRLGVYVLL 650 +G+SGG+K+R+SI +E+LT+P LLFLDEPTSGLDSA++++V+ + R+ +T+++SIHQPS EVF LF +L LLS G+TVYFG A +A +FF GFPCP+ +NPSDHFL+ +N DF +++ L +PT E L + +K S R+++ EI KK + ++ Q +LT RSF+NM RDLGYYW R+ VY++L Sbjct: 152 RGISGGEKKRLSIALEVLTKPSLLFLDEPTSGLDSASAFFVVQIL-----RNIASSGKTVVSSIHQPSGEVFALFDDLLLLSGGETVYFGEAESATKFFGEAGFPCPSRRNPSDHFLRCVNSDF-DNVTAALVESRRINDSSFSLHQLHETTNTLDPLDDIPTAEIRTTLVRKFKCSLYAAASRARIQEIASIVGIVTERKKGSQTNWWKQLRILTQRSFINMSRDLGYYWMRIAVYIVL 385
BLAST of CX044428 vs. ExPASy Swiss-Prot
Match: AB3G_ARATH (ABC transporter G family member 3 OS=Arabidopsis thaliana GN=ABCG3 PE=1 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 2.801e-34 Identity = 88/225 (39.11%), Postives = 127/225 (56.44%), Query Frame = 3 Query: 6 KGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIITSIHQPSSEVFQLFHNLCLLSSGQTVYFGPASAANEFFALNGFPCPTLQNPSDHFLKTINKDF----------QEDIEKGLAGVVPTQEAIDILTKSYKSSDSYLQVRSQVAEICKAQDSGALEKKSTHADFLTQCIVLTSRSFVNMYRDLGYYWFRLGVYVLL 650 KGL G++RRVSI E++ RP +LF+DEP LDS ++ +M + KL T++ +I+Q S+EVF LF +CLLS+G T++FG A + F+ GFPCP +Q+PSDHFL+ IN DF Q+D A + T AI L +YKSS V + + ++ + + G K A T+ VLT RS + M R+ YYW RL +Y++L Sbjct: 254 KGLRSGERRRVSIARELVMRPHILFIDEPLYHLDSVSALLMMVTLKKLASM-----GCTLVFTIYQSSTEVFGLFDRICLLSNGNTLFFGETLACLQHFSNAGFPCPIMQSPSDHFLRAINTDFDRIIAMCKNWQDDNGDFSAVNMDTAVAIRTLEATYKSSADADSVEAMIIKLTERE--GTQLKSKGKAGAATRVAVLTWRSLLVMSREWKYYWLRLILYMIL 471
BLAST of CX044428 vs. ExPASy Swiss-Prot
Match: ABCG1_DICDI (ABC transporter G family member 1 OS=Dictyostelium discoideum GN=abcG1 PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 3.543e-29 Identity = 61/129 (47.29%), Postives = 87/129 (67.44%), Query Frame = 3 Query: 6 KGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIITSIHQPSSEVFQLFHNLCLLSSGQTVYFGPASAANEFFALNGFPCPTLQNPSDHFLKTINKDFQEDIE 392 +G+SGG++RRV+I IE+LT P ++ LDEPTSGLD++ S+YVMS + KL + RTII +IHQP S ++ +F NL LL G T+Y+G A+ A E+F NG+ C NP+D FL IN ++ + Sbjct: 262 RGISGGERRRVTISIELLTGPSVILLDEPTSGLDASTSFYVMSALKKLAK-----SGRTIICTIHQPRSNIYDMFDNLLLLGDGNTIYYGKANKALEYFNANGYHCSEKTNPADFFLDLINTQVEDQAD 385
BLAST of CX044428 vs. ExPASy Swiss-Prot
Match: ABCG2_MOUSE (ATP-binding cassette sub-family G member 2 OS=Mus musculus GN=Abcg2 PE=2 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 3.316e-27 Identity = 83/234 (35.47%), Postives = 128/234 (54.70%), Query Frame = 3 Query: 6 KGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIITSIHQPSSEVFQLFHNLCLLSSGQTVYFGPASAANEFFALNGFPCPTLQNPSDHFLKTINKDF--------QEDIEKGLAGVVPTQE--AIDILTKSYKSSDSYLQVRSQVAEICKAQDSGALEKKSTHA--------DFLTQCIVLTSRSFVNMYRDLGYYWFRLGVYVLLG 653 +G+SGG+++R SI +E++T P +LFLDEPT+GLDS+ + V+ + ++ ++ RTII SIHQP +F+LF +L LL+SG+ V+ GPA A E+FA G+ C NP+D FL IN D ++D E E I+ L++ Y +S Y + ++++ ++ GA EKK T A F Q + RSF N+ + +L V V+LG Sbjct: 183 RGISGGERKRTSIGMELITDPSILFLDEPTTGLDSSTANAVLLLLKRMSKQ-----GRTIIFSIHQPRYSIFKLFDSLTLLASGKLVFHGPAQKALEYFASAGYHCEPYNNPADFFLDVINGDSSAVMLNREEQDNEANKTEEPSKGEKPVIENLSEFYINSAIYGETKAELDQL-----PGAQEKKGTSAFKEPVYVTSFCHQLRWIARRSFKNLLGNPQASVAQLIVTVILG 406
BLAST of CX044428 vs. ExPASy Swiss-Prot
Match: WHT1_CAEEL (ABC transporter ATP-binding protein/permease wht-1 OS=Caenorhabditis elegans GN=wht-1 PE=2 SV=2) HSP 1 Score: 121.324 bits (303), Expect = 4.331e-27 Identity = 73/207 (35.27%), Postives = 114/207 (55.07%), Query Frame = 3 Query: 6 KGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIITSIHQPSSEVFQLFHNLCLLSSGQTVYFGPASAANEFFALNGFPCPTLQNPSDHFLKTI------NKDFQEDIEKGLAGVVPTQEAIDILTKSYKSSDSYLQVRSQVAEICKAQDSGALEKKSTHADFLTQCIVLTSRSFVNMYRD 608 KGLS G+K+R+S E+LT PK+LF DEPTSGLD+ + +V+ + L D+G+ T+I +IHQPSS V+ LF+N+CL++ G+ +Y GP A F G+PCP NP+DH ++T+ + I K G + T +L + + L+ S V ++ + + +A F TQ + L RS++ + RD Sbjct: 135 KGLSCGEKKRLSFASEILTCPKILFCDEPTSGLDAFMAGHVVQALRSL--ADNGM---TVIITIHQPSSHVYSLFNNVCLMACGRVIYLGPGDQAVPLFEKCGYPCPAYYNPADHLIRTLAVIDSDRATSMKTISKIRQGFLSTDLGQSVLA---IGNANKLRAASFVTGSDTSEKTKTFFNQDYNASFWTQFLALFWRSWLTVIRD 333
BLAST of CX044428 vs. ExPASy Swiss-Prot
Match: ABCG2_RAT (ATP-binding cassette sub-family G member 2 OS=Rattus norvegicus GN=Abcg2 PE=1 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.646e-26 Identity = 79/229 (34.50%), Postives = 126/229 (55.02%), Query Frame = 3 Query: 6 KGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIITSIHQPSSEVFQLFHNLCLLSSGQTVYFGPASAANEFFALNGFPCPTLQNPSDHFLKTINKDF--------QEDIEKGLAGVVPTQE--AIDILTKSYKSSDSYLQVRSQVAEICKAQ---DSGALEKKSTHADFLTQCIVLTSRSFVNMYRDLGYYWFRLGVYVLLG 653 +G+SGG+++R SI +E++T P +LFLDEPT+GLDS+ + V+ + ++ ++ RTII SIHQP +F+LF +L LL+SG+ ++ GPA A E+FA G+ C NP+D FL IN D ++D E +E I+ L + Y +S Y + ++++ ++ AQ S A + F Q + RSF N+ + +L V V+LG Sbjct: 183 RGISGGERKRTSIGMELITDPSILFLDEPTTGLDSSTANAVLLLLKRMSKQ-----GRTIIFSIHQPRYSIFKLFDSLTLLASGKLMFHGPAQKALEYFASAGYHCEPYNNPADFFLDVINGDSSAVMLNRGEQDHEANKTEEPSKREKPIIENLAEFYINSTIYGETKAELDQLPVAQKKKGSSAFREPVYVTSFCHQLRWIARRSFKNLLGNPQASVAQLIVTVILG 406
BLAST of CX044428 vs. ExPASy Swiss-Prot
Match: ABCG2_HUMAN (ATP-binding cassette sub-family G member 2 OS=Homo sapiens GN=ABCG2 PE=1 SV=3) HSP 1 Score: 115.546 bits (288), Expect = 2.376e-25 Identity = 70/210 (33.33%), Postives = 120/210 (57.14%), Query Frame = 3 Query: 6 KGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIITSIHQPSSEVFQLFHNLCLLSSGQTVYFGPASAANEFFALNGFPCPTLQNPSDHFLKTINKDF------QEDIEKGLAGVVPTQE---AIDILTKSYKSSDSYLQVRSQVAEIC---KAQDSGALEKKSTHADFLTQCIVLTSRSFVNM 599 +G+SGG+++R SI +E++T P +LFLDEPT+GLDS+ + V+ + ++ ++ RTII SIHQP +F+LF +L LL+SG+ ++ GPA A +F G+ C NP+D FL IN D +E+ K + P+++ I+ L + Y +S Y + ++++ ++ K + ++ S F Q ++ RSF N+ Sbjct: 184 RGVSGGERKRTSIGMELITDPSILFLDEPTTGLDSSTANAVLLLLKRMSKQ-----GRTIIFSIHQPRYSIFKLFDSLTLLASGRLMFHGPAQEALGYFESAGYHCEAYNNPADFFLDIINGDSTAVALNREEDFKATEIIEPSKQDKPLIEKLAEIYVNSSFYKETKAELHQLSGGEKKKKITVFKEISYTTSFCHQLRWVSKRSFKNL 388 The following BLAST results are available for this feature:
BLAST of CX044428 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 121
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Sequences
The
following sequences are available for this feature:
EST sequence >CX044428 ID=CX044428; Name=CX044428; organism=Citrus sinensis; type=EST; length=654bpback to top |