CX043883
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX043883 vs. ExPASy Swiss-Prot
Match: TI10B_ARATH (Protein TIFY 10B OS=Arabidopsis thaliana GN=TIFY10B PE=1 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.451e-23 Identity = 72/192 (37.50%), Postives = 100/192 (52.08%), Query Frame = -1 Query: 243 LFPQQAVFAPKNDTPNMIDSSLNK-------PAPQTAQMTIFYGGQVIAFNDFPADKANEIMQLASNGSSLSHGTAYPPMQLPAQGYNSFAASLPKSPVESTPPVSPGPPKILTEPSCSVPPRSNSIPNFGNNLIPECAQPPSRPCDLPIARRNSLHRFLEKRKDRIVARAPYQVNGSAGAPDKPADSKSWL 797 +FP+Q+ F+ + + D + K P Q+A +TIFYGG+V+ F+DF A+KA E++ LA+ GS+ S A+ N+ +A K S PV EP + P P S C+LPIARR SLHRFLEKRKDRI ++APYQ++GSA A KP + +WL Sbjct: 82 MFPRQSSFSSSSSSGTKEDVQMIKETTKSVKPESQSAPLTIFYGGRVMVFDDFSAEKAKEVIDLANKGSAKSFTC------FTAEVNNNHSAYSQKEIASSPNPVCSPAKTAAQEP---IQPN-----------------PASLACELPIARRASLHRFLEKRKDRITSKAPYQIDGSAEASSKPT-NPAWL 246
BLAST of CX043883 vs. ExPASy Swiss-Prot
Match: TI10A_ARATH (Protein TIFY 10A OS=Arabidopsis thaliana GN=TIFY10A PE=1 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.451e-23 Identity = 77/201 (38.31%), Postives = 101/201 (50.25%), Query Frame = -1 Query: 228 NLFPQQAVFA------PKNDTPNMIDSSLN-KPAPQTAQMTIFYGGQVIAFNDFPADKANEIMQLASNGSSLSHGTAYPPMQLPAQGYNSFAASLPKSPVESTPPVSPGPPKILTEPSCSVPPRSNSIPNFGNNLIPECAQPPSRP-CDLPIARRNSLHRFLEKRKDRIVARAPYQVNGSAGAPDKP--ADSKSWLGLAAQ 800 NLFP+Q F+ PK D M ++ + KP QTA +TIFY GQVI FNDF A+KA E++ LAS G++ NS A K T+ ++ +N +P+ E Q P +LPIARR SLHRFLEKRKDR+ ++APYQ+ A A P + SWLGLAA+ Sbjct: 88 NLFPRQPSFSSSSSSLPKEDVLKMTQTTRSVKPESQTAPLTIFYAGQVIVFNDFSAEKAKEVINLASKGTA-----------------NSLA-------------------KNQTDIRSNIATIANQVPHPRKTTTQEPIQSSPTPLTELPIARRASLHRFLEKRKDRVTSKAPYQLCDPAKASSNPQTTGNMSWLGLAAE 252
BLAST of CX043883 vs. ExPASy Swiss-Prot
Match: TIF6B_ARATH (Protein TIFY 6B OS=Arabidopsis thaliana GN=TIFY6B PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.794e-11 Identity = 54/163 (33.13%), Postives = 79/163 (48.47%), Query Frame = -1 Query: 300 SLNKPAPQTAQMTIFYGGQVIAFNDFPADKANEIMQLASNGSSLSHGTAYPPMQLPAQGYNSFAASLPKS--PVESTPPVSPGPPKI--------LTEPSCSVPPRSNSIPNFGNNLIPECAQPPSRPCD-------LPIARRNSLHRFLEKRKDRIVARAPY 737 S +KP AQ+TIFY G V ++D +KA IM LA NGSS+ + P Q Q + AS+ S P P +S P+ T+ + + ++ G+N+ C P S + LP+AR+ SL RFLEKRK+R+ + +PY Sbjct: 168 SSSKPIGSPAQLTIFYAGSVCVYDDISPEKAKAIMLLAGNGSSMPQ--VFSPPQTHQQVVHHTRASVDSSAMPPSFMPTISYLSPEAGSSTNGLGATKATRGLTSTYHNNQANGSNI--NCPVPVSCSTNVMAPTVALPLARKASLARFLEKRKERVTSVSPY 326 The following BLAST results are available for this feature:
BLAST of CX043883 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX043883 ID=CX043883; Name=CX043883; organism=Citrus sinensis; type=EST; length=806bpback to top |