DC900402
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC900402 vs. ExPASy Swiss-Prot
Match: SCL1_ARATH (Scarecrow-like protein 1 OS=Arabidopsis thaliana GN=SCL1 PE=2 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 1.904e-36 Identity = 74/95 (77.89%), Postives = 83/95 (87.37%), Query Frame = 2 Query: 20 EXRMNVERQCLARDIVNIIACEGEERIERYELAGKWRARMTMAGFTSCPMSADVTDMIRKLIK-QYCDRYKLKEELGLLHFGWEDKSLIVASAWK 301 + RMNVERQCLARDIVNI+ACEGEERIERYE AGKWRARM MAGF PMSA VT+ I+ LIK QYC++YKLKEE+G LHF WE+KSLIVASAW+ Sbjct: 499 QERMNVERQCLARDIVNIVACEGEERIERYEAAGKWRARMMMAGFNPKPMSAKVTNNIQNLIKQQYCNKYKLKEEMGELHFCWEEKSLIVASAWR 593
BLAST of DC900402 vs. ExPASy Swiss-Prot
Match: PAT1_ARATH (Scarecrow-like transcription factor PAT1 OS=Arabidopsis thaliana GN=PAT1 PE=2 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 3.047e-26 Identity = 51/95 (53.68%), Postives = 70/95 (73.68%), Query Frame = 2 Query: 17 HEXRMNVERQCLARDIVNIIACEGEERIERYELAGKWRARMTMAGFTSCPMSADVTDMIRKLIKQYCDRYKLKEELGLLHFGWEDKSLIVASAWK 301 H+ R+NVE+ CLARD+VNIIACEG +R+ER+EL GKWR+R MAGFT P+S V I+ L++ Y D+Y+L+E G L+ GW + L+ + AWK Sbjct: 396 HKQRINVEQHCLARDVVNIIACEGADRVERHELLGKWRSRFGMAGFTPYPLSPLVNSTIKSLLRNYSDKYRLEERDGALYLGWMHRDLVASCAWK 490
BLAST of DC900402 vs. ExPASy Swiss-Prot
Match: CIGR2_ORYSJ (Chitin-inducible gibberellin-responsive protein 2 OS=Oryza sativa subsp. japonica GN=CIGR2 PE=2 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 6.789e-26 Identity = 53/91 (58.24%), Postives = 69/91 (75.82%), Query Frame = 2 Query: 26 RMNVERQCLARDIVNIIACEGEERIERYELAGKWRARMTMAGFTSCPMSADVTDMIRKLIKQYCDRYKLKEELGLLHFGWEDKSLIVASAW 298 R+N+E+ CLAR+IVN+IACEGEER ERYE GKW+AR+TMAGF P+S+ V IR L++ Y D YKL E G L+ GW+ + L+V+SAW Sbjct: 453 RINMEQHCLAREIVNLIACEGEERAERYEPFGKWKARLTMAGFRPSPLSSLVNATIRTLLQSYSDNYKLAERDGALYLGWKSRPLVVSSAW 543
BLAST of DC900402 vs. ExPASy Swiss-Prot
Match: CIGR1_ORYSJ (Chitin-inducible gibberellin-responsive protein 1 OS=Oryza sativa subsp. japonica GN=CIGR1 PE=2 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 5.747e-25 Identity = 51/94 (54.26%), Postives = 72/94 (76.60%), Query Frame = 2 Query: 17 HEXRMNVERQCLARDIVNIIACEGEERIERYELAGKWRARMTMAGFTSCPMSADVTDMIRKLIKQYCDRYKLKEELGLLHFGWEDKSLIVASAW 298 ++ R++VE+ CLA+DIVNIIACEG++R+ER+EL GKW++R+TMAGF P+S+ V +IRKL+ Y D+Y L E+ G + GW + LI ASAW Sbjct: 477 NKERISVEQHCLAKDIVNIIACEGKDRVERHELLGKWKSRLTMAGFRPYPLSSYVNSVIRKLLACYSDKYTLDEKDGAMLLGWRSRKLISASAW 570
BLAST of DC900402 vs. ExPASy Swiss-Prot
Match: SCL21_ARATH (Scarecrow-like protein 21 OS=Arabidopsis thaliana GN=SCL21 PE=1 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 9.803e-25 Identity = 48/95 (50.53%), Postives = 71/95 (74.74%), Query Frame = 2 Query: 17 HEXRMNVERQCLARDIVNIIACEGEERIERYELAGKWRARMTMAGFTSCPMSADVTDMIRKLIKQYCDRYKLKEELGLLHFGWEDKSLIVASAWK 301 H+ R+N+E+ C+ARD+VNIIACEG ERIER+EL GKW++R +MAGF P+S+ ++ IR L++ Y + Y ++E G L+ GW D+ L+ + AWK Sbjct: 319 HKERINIEQHCMARDVVNIIACEGAERIERHELLGKWKSRFSMAGFEPYPLSSIISATIRALLRDYSNGYAIEERDGALYLGWMDRILVSSCAWK 413
BLAST of DC900402 vs. ExPASy Swiss-Prot
Match: SCL5_ARATH (Scarecrow-like protein 5 OS=Arabidopsis thaliana GN=SCL5 PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.198e-22 Identity = 47/95 (49.47%), Postives = 69/95 (72.63%), Query Frame = 2 Query: 17 HEXRMNVERQCLARDIVNIIACEGEERIERYELAGKWRARMTMAGFTSCPMSADVTDMIRKLIKQYCDRYKLKEELGLLHFGWEDKSLIVASAWK 301 H+ R+NVE+ CLAR++VN+IACEG ER ER+E GKWR+R MAGF P+S+ V I+ L++ Y ++Y L+E G L+ GW+++ LI + AW+ Sbjct: 503 HKERINVEQHCLAREVVNLIACEGVEREERHEPLGKWRSRFHMAGFKPYPLSSYVNATIKGLLESYSEKYTLEERDGALYLGWKNQPLITSCAWR 597
BLAST of DC900402 vs. ExPASy Swiss-Prot
Match: SCL8_ARATH (Scarecrow-like protein 8 OS=Arabidopsis thaliana GN=SCL8 PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 2.676e-14 Identity = 36/84 (42.86%), Postives = 55/84 (65.48%), Query Frame = 2 Query: 50 LARDIVNIIACEGEERIERYELAGKWRARMTMAGFTSCPMSADVTDMIRKLIKQYCDRYKLKEELGLLHFGWEDKSLIVASAWK 301 + R +VN +ACEG +RIER E+ GKWR RM+MAGF P+S + + ++ + + +KE+ G + FGW ++L VASAW+ Sbjct: 557 IGRKLVNAVACEGIDRIERCEVFGKWRMRMSMAGFELMPLSEKIAESMKSRGNRVHPGFTVKEDNGGVCFGWMGRALTVASAWR 640
BLAST of DC900402 vs. ExPASy Swiss-Prot
Match: SCL3_ARATH (Scarecrow-like protein 3 OS=Arabidopsis thaliana GN=SCL3 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.468e-12 Identity = 39/96 (40.62%), Postives = 56/96 (58.33%), Query Frame = 2 Query: 20 EXRMNVERQCLARDIVNIIACEGEERIERYELAGKWRARMTMAGFTSCPMSADVTDMIRKLIKQYC--DRYKLKEELGLLHFGWEDKSLIVASAWK 301 + R+ VE+ +I NII+CEG ER ER+E KW R+ +AGF + P+S R+L+ Q C D Y++KEE G W+D+ L SAW+ Sbjct: 385 QDRIKVEKMLFGEEIKNIISCEGFERRERHEKLEKWSQRIDLAGFGNVPLSYYAMLQARRLL-QGCGFDGYRIKEESGCAVICWQDRPLYSVSAWR 479
BLAST of DC900402 vs. ExPASy Swiss-Prot
Match: RGL2_ARATH (DELLA protein RGL2 OS=Arabidopsis thaliana GN=RGL2 PE=1 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 1.918e-12 Identity = 34/86 (39.53%), Postives = 49/86 (56.98%), Query Frame = 2 Query: 50 LARDIVNIIACEGEERIERYELAGKWRARMTMAGFTSCPMSADVTDMIRKLIKQYC--DRYKLKEELGLLHFGWEDKSLIVASAWK 301 L R I+N++A EG +R+ER+E A +WR RM AGF + + L+ Y D Y+++E G L GW+ + LI SAWK Sbjct: 460 LGRQILNVVAAEGSDRVERHETAAQWRIRMKSAGFDPIHLGSSAFKQASMLLSLYATGDGYRVEENDGCLMIGWQTRPLITTSAWK 545
BLAST of DC900402 vs. ExPASy Swiss-Prot
Match: SLN1_HORVU (DELLA protein SLN1 OS=Hordeum vulgare GN=SLN1 PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 3.271e-12 Identity = 34/86 (39.53%), Postives = 50/86 (58.14%), Query Frame = 2 Query: 50 LARDIVNIIACEGEERIERYELAGKWRARMTMAGFTSCPMSADVTDMIRKLIKQYC--DRYKLKEELGLLHFGWEDKSLIVASAWK 301 L R I N++ACEG ER ER+E G+WR R+ AGF + + ++ L+ + D YK++E+ G L GW + LI SAW+ Sbjct: 529 LGRQICNVVACEGTERTERHETLGQWRNRLGNAGFETVHLGSNAYKQASTLLALFAGGDGYKVEEKEGCLTLGWHTRPLIATSAWR 614 The following BLAST results are available for this feature:
BLAST of DC900402 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DC900402 ID=DC900402; Name=DC900402; organism=Citrus sinensis; type=EST; length=528bpback to top |