CX043825
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX043825 vs. ExPASy Swiss-Prot
Match: CTNS_ARATH (Cystinosin homolog OS=Arabidopsis thaliana GN=At5g40670 PE=2 SV=1) HSP 1 Score: 236.884 bits (603), Expect = 1.011e-61 Identity = 118/184 (64.13%), Postives = 141/184 (76.63%), Query Frame = -1 Query: 248 QMIPVAANDVAFSMHAVLLTIITLFQIAIYERGVQKVSKISMAIVSVVWLAAAVCFFVALPNHSWLWLINFFNAIQVIMTLIKYIPQAIMNFRRKSTDGFSIGNILLDFLGGCTNYSQMIVQSIDQNSWVNFYGNIGKTXXXXXXXXXXXXFICQHYVLYPAKKAVISSKLSKDGGVEPLLKSS 799 +MIPVAANDVAFS+HAV++T +TLFQI IYERG QKVS++++ IV VVW AA+CFF+ALP HSWLWLI+ FN+IQV MT +KYIPQA MNF RKST G+SIGNILLDF GG NY QM++QSIDQNSW NFYGN+GKT F+ QHYVLYP KK S + ++ EPL+ SS Sbjct: 84 EMIPVAANDVAFSIHAVVMTAVTLFQIFIYERGPQKVSRLAIGIVVVVWGFAAICFFIALPTHSWLWLISIFNSIQVFMTCVKYIPQAKMNFTRKSTVGWSIGNILLDFTGGLANYLQMVIQSIDQNSWKNFYGNMGKTLLSLISIFFDILFMFQHYVLYPEKKVSKSPETGEESN-EPLIDSS 266
BLAST of CX043825 vs. ExPASy Swiss-Prot
Match: CTNS_DICDI (Cystinosin homolog OS=Dictyostelium discoideum GN=ctns PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 5.411e-31 Identity = 66/164 (40.24%), Postives = 101/164 (61.59%), Query Frame = -1 Query: 305 IPVAANDVAFSMHAVLLTIITLFQIAIYERGVQKVSKISMAIVSVVWLAAAVCFFVALPN-HSWLWLINFFNAIQVIMTLIKYIPQAIMNFRRKSTDGFSIGNILLDFLGGCTNYSQMIVQSIDQNSWVNFYGNIGKTXXXXXXXXXXXXFICQHYVLYPAKKA 793 IPV +D+AF++H +LT IT+ Q IY+RG QK SK+ + I +++W++ V + N +WLW+IN+++ +++ +T IKYIPQA +NF+ KST G+S+ N+LLDF GG + QM + D +W F G+ K FI QHY+LY K+ Sbjct: 79 IPVQQSDIAFAIHGFVLTAITIIQCFIYDRGNQKNSKLGIGIATLIWVSLIVMTILGFSNVFTWLWVINYYSYVKLFITFIKYIPQAYLNFKNKSTSGWSVHNVLLDFSGGVLSLLQMFLDVADSGNWNIFTGDPVKLGLSLFSIAFDILFIIQHYILYRNPKS 242
BLAST of CX043825 vs. ExPASy Swiss-Prot
Match: CTNS_HUMAN (Cystinosin OS=Homo sapiens GN=CTNS PE=1 SV=2) HSP 1 Score: 123.635 bits (309), Expect = 1.247e-27 Identity = 67/158 (42.41%), Postives = 95/158 (60.13%), Query Frame = -1 Query: 320 PVAANDVAFSMHAVLLTIITLFQIAIYERGVQKVSKISMAIVSVVWLAAAVCFFVALPN-HSWLWLINFFNAIQVIMTLIKYIPQAIMNFRRKSTDGFSIGNILLDFLGGCTNYSQMIVQSIDQNSWVNFYGNIGKTXXXXXXXXXXXXFICQHYVLY 790 PV +NDV FS+HAV+LT+I + Q +YERG Q+VS ++ + + WL A V VA +WL + F+ I++ +TL+KY PQA MNF KST+G+SIGN+LLDF GG + QM +QS + + W +G+ K F QH+ LY Sbjct: 200 PVNSNDVFFSLHAVVLTLIIIVQCCLYERGGQRVSWPAIGFLVLAWLFAFVTMIVAAVGVTTWLQFLFCFSYIKLAVTLVKYFPQAYMNFYYKSTEGWSIGNVLLDFTGGSFSLLQMFLQSYNNDQWTLIFGDPTKFGLGVFSIVFDVVFFIQHFCLY 357
BLAST of CX043825 vs. ExPASy Swiss-Prot
Match: CTNS_BOVIN (Cystinosin OS=Bos taurus GN=CTNS PE=2 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.247e-27 Identity = 64/161 (39.75%), Postives = 96/161 (59.63%), Query Frame = -1 Query: 311 PVAANDVAFSMHAVLLTIITLFQIAIYERGVQKVSKISMAIVSVVWLAAAVCFFVALPNHS-WLWLINFFNAIQVIMTLIKYIPQAIMNFRRKSTDGFSIGNILLDFLGGCTNYSQMIVQSIDQNSWVNFYGNIGKTXXXXXXXXXXXXFICQHYVLYPAK 790 PV +NDV FS+HAV LT++ + Q +YERG Q+VS ++++ + + WL + +A + WL + F+ I++ +TL+KY PQA MNF KST+G+SIGN+LLDF GG + QM +QS + + W +G+ K F QH+ LY K Sbjct: 200 PVDSNDVFFSLHAVALTLVVIVQCLLYERGSQRVSWLAISFLVLSWLFTLIALIMAAVGATTWLQFLFCFSYIKLAVTLVKYFPQAYMNFHYKSTEGWSIGNVLLDFTGGSFSLLQMFLQSYNNDQWTLIFGDPTKFGLGIFSIIFDVVFFIQHFCLYRKK 360
BLAST of CX043825 vs. ExPASy Swiss-Prot
Match: CTNS_MOUSE (Cystinosin OS=Mus musculus GN=Ctns PE=1 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 4.740e-27 Identity = 68/161 (42.24%), Postives = 92/161 (57.14%), Query Frame = -1 Query: 311 PVAANDVAFSMHAVLLTIITLFQIAIYERGVQKVSKISMAIVSVVWLAAAVCFFVALPN-HSWLWLINFFNAIQVIMTLIKYIPQAIMNFRRKSTDGFSIGNILLDFLGGCTNYSQMIVQSIDQNSWVNFYGNIGKTXXXXXXXXXXXXFICQHYVLYPAK 790 PV +ND FS+HAV LT+I + Q +YERG Q+VS S+ + + WL V VA +WL + F+ I++I+TLIKY PQA MNF KST G+SIG +LLDF GG + QM +QS + + W +G+ K F QH+ LY K Sbjct: 200 PVDSNDAFFSLHAVALTLIVILQCCLYERGNQRVSWPSIGFLVLAWLFVLVTMIVAAVGITTWLQFLFCFSYIKLIITLIKYFPQAYMNFYYKSTKGWSIGGVLLDFTGGSFSLLQMFLQSYNNDQWTLIFGDPTKFGLGVFTIFFDVVFFIQHFYLYRKK 360
BLAST of CX043825 vs. ExPASy Swiss-Prot
Match: CTNS_DROME (Cystinosin homolog OS=Drosophila melanogaster GN=CG17119 PE=1 SV=2) HSP 1 Score: 121.709 bits (304), Expect = 4.740e-27 Identity = 71/187 (37.97%), Postives = 104/187 (55.61%), Query Frame = -1 Query: 239 PVAANDVAFSMHAVLLTIITLFQIAIYERGVQKVSKISMAIVSVVWLAAAVCFFVALPNHS---WLWLINFFNAIQVIMTLIKYIPQAIMNFRRKSTDGFSIGNILLDFLGGCTNYSQMIVQSIDQNSWVNFYGNIGKTXXXXXXXXXXXXFICQHYVLYPAKKAVISSKLSKDGGVEPLLKSSDHP 790 PV NDV FS+HA+ T IT+ Q Y+R Q+VS I+ I+++ A V L S WL + + + +++ +T+IKY+PQA+MN+RRKST G+SIGNILLDF GG + QMI+ + + + WV+ +G+ K F+ QHYV Y + SS L+ V+ S P Sbjct: 205 PVMLNDVVFSLHAMFATCITILQCFFYQRAQQRVSFIAYGILAI--FAVVVVVSAGLAGGSVIHWLDFLYYCSYVKLTITIIKYVPQALMNYRRKSTSGWSIGNILLDFTGGTLSMLQMILNAHNYDDWVSIFGDPTKFGLGLFSVLFDVFFMLQHYVFYRHSRESSSSDLTTVTDVQNRTNESPPP 389
BLAST of CX043825 vs. ExPASy Swiss-Prot
Match: CTNS_CAEEL (Cystinosin homolog OS=Caenorhabditis elegans GN=ctns-1 PE=2 SV=2) HSP 1 Score: 110.153 bits (274), Expect = 1.427e-23 Identity = 65/160 (40.62%), Postives = 88/160 (55.00%), Query Frame = -1 Query: 317 PVAANDVAFSMHAVLLTIITLFQIAIYERGVQKVSKISMAIVSVVWLAAAVCFFVA--LPNHSWLWLINFFNAIQVIMTLIKYIPQAIMNFRRKSTDGFSIGNILLDFLGGCTNYSQMIVQSIDQNSWVNFYGNIGKTXXXXXXXXXXXXFICQHYVLYP 790 PV NDV F++HA L IT+ Q YER Q VS +A++ +V ++ C A L L + + I++ +T KY PQA N+ RKST G+SIGNI+LDF GG + QMI+Q+++ N W FY N K F+ QHYVLYP Sbjct: 202 PVLLNDVVFAVHAFLACFITILQCLFYERDNQSVSSKCIALM-IVLISFGFCSAAATVLRKIQLLSFVTSLSYIKMAVTCCKYFPQAYFNYTRKSTVGWSIGNIMLDFTGGTLDILQMILQAVNVNDWSAFYANPVKFGLGFVSIFFDIIFMVQHYVLYP 360
BLAST of CX043825 vs. ExPASy Swiss-Prot
Match: CTNS_CAEBR (Cystinosin homolog OS=Caenorhabditis briggsae GN=ctns-1 PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 3.180e-23 Identity = 65/190 (34.21%), Postives = 99/190 (52.11%), Query Frame = -1 Query: 227 PVAANDVAFSMHAVLLTIITLFQIAIYERGVQKVS-KISMAIVSVVWLAAAVCFFVALPNHSWLWLINFFNAIQVIMTLIKYIPQAIMNFRRKSTDGFSIGNILLDFLGGCTNYSQMIVQSIDQNSWVNFYGNIGKTXXXXXXXXXXXXFICQHYVLYPAKKAVISSKLSKDG-GVEPLLKSSDHPESEN 790 PV NDV F++HA L +T+ Q YER Q++S K + I+ +V L + L + + I++ +T KY PQA N++RKST G+SIGNILLDF GG + QM++Q+I+ N W FY N K F+ QHY LYP + + D + +++ ++H ++N Sbjct: 201 PVLLNDVVFAVHAFLACFVTILQCIFYERDQQRISTKCIILIIGLVSFGFVSVVVTVLNKITILDFVVSLSYIKMAVTCCKYFPQAYFNYQRKSTVGWSIGNILLDFTGGSLDILQMVLQAINVNDWSAFYANPVKFGLGFVSIFFDIIFMIQHYALYPDAEVPHNEYHGVDNPDPDSIVRDAEHGAADN 390 The following BLAST results are available for this feature:
BLAST of CX043825 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX043825 ID=CX043825; Name=CX043825; organism=Citrus sinensis; type=EST; length=802bpback to top |