CX043819

Overview
NameCX043819
Unique NameCX043819
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length775
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX043819 vs. ExPASy Swiss-Prot
Match: FBL91_ARATH (F-box/LRR-repeat protein At5g63520 OS=Arabidopsis thaliana GN=At5g63520 PE=2 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 2.957e-39
Identity = 101/256 (39.45%), Postives = 143/256 (55.86%), Query Frame = 3 
Query:    3 WNCVCNSILSRPRIASACSFKASAPFDM*IALQEVLDKVLLEPMRPHFAIANVGRGFNMRRTLDFLVKHLGPRTPIILSVVHGVMGRDALTDEFREVKFQDHEDIGVNRGICTCGQQSGIVLTVGYLPGLKVDAIPLLRRKEIVQVPVDDTYVDVYLAPPVPMIDQFVMDIQNYTTSVSG-CASPVGIIMFGKEDMDQKPIIEKLDYAMSMNTVFVGDERSRFAYRSGDDLRNVCGNPAFISDAVALVFASDKEKP 767
            W+ VCN ILSRP++ SA S       D   A +EVLDKVL EP+RP F IAN+  G NM  TL  + + +G R PII+SVV G++G++A  D+  EV+     D  +            I+LT+GYLPG+KVD IP+++ K                     M D+FVMDI+NY + VSG  A+P  +I+F ++    +P++ KLDYAM   TV VG +   F ++ G++ RNV      I     L+FA D+ +P
Sbjct:   63 WSSVCNRILSRPKMISAFSRNP----DQLRAGEEVLDKVLSEPIRPQFVIANITCG-NMEETLTLITERVGSRVPIIVSVVTGILGKEACNDKAGEVRLHSTSDDELFDVA-----NFAILLTIGYLPGMKVDIIPVIQAKG---------------ESGAEMEDKFVMDIRNYMSMVSGHAAAPACLILFAEDTHATEPVLHKLDYAMPAETVIVGGQIGEFLHKRGNEPRNVQLQKDDIRVLAGLIFARDRHRP 293
The following BLAST results are available for this feature:
BLAST of CX043819 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
FBL91_ARATH2.957e-3939.45F-box/LRR-repeat protein At5g63520 OS=Arabidopsis ... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS07_13F04_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-13F04-L7-1-7.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043819 ID=CX043819; Name=CX043819; organism=Citrus sinensis; type=EST; length=775bp
CTTGGAACTGCGTTTGCAACTCCATTCTCTCTCGCCCCAGAATCGCCTCT
GCTTGTTCCTTCAAAGCTTCTGCCCCATTTGATATGTAGATTGCTCTACA
AGAGGTTCTCGATAAGGTTCTTTTGGAGCCCATGCGGCCGCATTTTGCCA
TCGCAAATGTTGGCAGAGGCTTTAACATGAGAAGGACTCTCGATTTTTTA
GTAAAACATTTGGGTCCACGAACTCCGATTATTTTATCCGTTGTTCATGG
AGTAATGGGAAGAGATGCTCTTACTGATGAGTTTAGAGAGGTCAAGTTTC
AGGATCATGAGGATATTGGTGTCAATCGTGGCATATGTACATGTGGTCAG
CAGTCAGGCATTGTATTGACAGTTGGCTATTTGCCTGGATTAAAAGTTGA
TGCCATTCCATTACTTCGGCGGAAAGAGATTGTGCAGGTTCCAGTTGATG
ATACATATGTTGATGTATACCTGGCACCTCCAGTGCCAATGATTGATCAA
TTTGTGATGGATATCCAGAATTACACAACCTCTGTTTCAGGTTGCGCATC
ACCGGTTGGGATTATAATGTTTGGGAAAGAAGATATGGACCAGAAACCTA
TCATTGAAAAATTGGATTATGCAATGTCTATGAATACCGTCTTTGTGGGT
GATGAAAGAAGCCGGTTTGCATACAGGAGTGGTGATGATTTGAGAAATGT
CTGTGGAAACCCAGCATTCATTTCCGATGCTGTTGCTCTTGTATTTGCAA
GTGATAAAGAGAAACCTCATGGTAC
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