DC900324
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900324 vs. ExPASy Swiss-Prot
Match: SNAK2_SOLTU (Snakin-2 OS=Solanum tuberosum GN=SN2 PE=1 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 1.181e-27 Identity = 50/78 (64.10%), Postives = 60/78 (76.92%), Query Frame = 3 Query: 147 DQMVNTNEGASSYPTPTIDCGAACKARCQLSSRPNLCHRACGTCCARCKCVPPGTSGHLEVCPCYATMTTHHGRRKCP 380 DQ+ + ++Y IDCG AC ARC+LSSRP LC+RACGTCCARC CVPPGTSG+ E CPCYA++TTH +RKCP Sbjct: 27 DQVTSNAISEAAYSYKKIDCGGACAARCRLSSRPRLCNRACGTCCARCNCVPPGTSGNTETCPCYASLTTHGNKRKCP 104
BLAST of DC900324 vs. ExPASy Swiss-Prot
Match: GASA1_ARATH (Gibberellin-regulated protein 1 OS=Arabidopsis thaliana GN=GASA1 PE=1 SV=2) HSP 1 Score: 112.849 bits (281), Expect = 9.358e-25 Identity = 45/61 (73.77%), Postives = 51/61 (83.61%), Query Frame = 3 Query: 198 IDCGAACKARCQLSSRPNLCHRACGTCCARCKCVPPGTSGHLEVCPCYATMTTHHGRRKCP 380 IDCG+AC ARC+LS RP LCHRACGTCC RC CVPPGT G+ + C CYA++TTH GRRKCP Sbjct: 38 IDCGSACVARCRLSRRPRLCHRACGTCCYRCNCVPPGTYGNYDKCQCYASLTTHGGRRKCP 98
BLAST of DC900324 vs. ExPASy Swiss-Prot
Match: GASA3_ARATH (Gibberellin-regulated protein 3 OS=Arabidopsis thaliana GN=GASA3 PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 9.683e-22 Identity = 41/61 (67.21%), Postives = 47/61 (77.05%), Query Frame = 3 Query: 198 IDCGAACKARCQLSSRPNLCHRACGTCCARCKCVPPGTSGHLEVCPCYATMTTHHGRRKCP 380 IDCG CK RC SSRPNLC RAC +CC RC CVPPGT+G+ +CPCYA++TT GR KCP Sbjct: 39 IDCGGRCKGRCSKSSRPNLCLRACNSCCYRCNCVPPGTAGNHHLCPCYASITTRGGRLKCP 99
BLAST of DC900324 vs. ExPASy Swiss-Prot
Match: GASA2_ARATH (Gibberellin-regulated protein 2 OS=Arabidopsis thaliana GN=GASA2 PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 9.683e-22 Identity = 41/61 (67.21%), Postives = 47/61 (77.05%), Query Frame = 3 Query: 198 IDCGAACKARCQLSSRPNLCHRACGTCCARCKCVPPGTSGHLEVCPCYATMTTHHGRRKCP 380 IDCG CK RC SSR LC RAC +CC+RC CVPPGTSG+ +CPCYA++TTH GR KCP Sbjct: 39 IDCGGRCKDRCSKSSRTKLCLRACNSCCSRCNCVPPGTSGNTHLCPCYASITTHGGRLKCP 99
BLAST of DC900324 vs. ExPASy Swiss-Prot
Match: SNAK1_SOLTU (Snakin-1 OS=Solanum tuberosum GN=SN1 PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.186e-11 Identity = 29/76 (38.16%), Postives = 38/76 (50.00%), Query Frame = 3 Query: 153 MVNTNEGASSYPTPTIDCGAACKARCQLSSRPNLCHRACGTCCARCKCVPPGTSGHLEVCPCYATMTTHHGRRKCP 380 ++ T SS+ C + CK RC + + C + CG CC CKCVP GT G+ CPCY G+ KCP Sbjct: 19 LIQTTMAGSSF------CDSKCKLRCSKAGLADRCLKYCGICCEECKCVPSGTYGNKHECPCYRDKKNSKGKSKCP 88 The following BLAST results are available for this feature:
BLAST of DC900324 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DC900324 ID=DC900324; Name=DC900324; organism=Citrus sinensis; type=EST; length=520bpback to top |