DC900216
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900216 vs. ExPASy Swiss-Prot
Match: SKP1B_ARATH (SKP1-like protein 1B OS=Arabidopsis thaliana GN=SKP1B PE=1 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 7.816e-24 Identity = 53/62 (85.48%), Postives = 53/62 (85.48%), Query Frame = 2 Query: 2 FDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 187 FDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTP NQWAFE Sbjct: 110 FDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 171
BLAST of DC900216 vs. ExPASy Swiss-Prot
Match: SKP1A_ARATH (SKP1-like protein 1A OS=Arabidopsis thaliana GN=SKP1A PE=1 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 5.601e-22 Identity = 50/62 (80.65%), Postives = 51/62 (82.26%), Query Frame = 2 Query: 2 FDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 187 F+LILAANYLNIK LLDLTCQTVADMIKGKTPEEIR TFNIKNDFTP NQWAFE Sbjct: 99 FELILAANYLNIKNLLDLTCQTVADMIKGKTPEEIRTTFNIKNDFTPEEEEEVRRENQWAFE 160
BLAST of DC900216 vs. ExPASy Swiss-Prot
Match: ASK11_ARATH (SKP1-like protein 11 OS=Arabidopsis thaliana GN=ASK11 PE=1 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 1.248e-21 Identity = 49/62 (79.03%), Postives = 51/62 (82.26%), Query Frame = 2 Query: 2 FDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 187 F+LILAANYLNIK LLDLTCQTVADMIKGKTPEEIR TFNI+NDFTP NQWAFE Sbjct: 91 FELILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRSTFNIENDFTPEEEEAVRKENQWAFE 152
BLAST of DC900216 vs. ExPASy Swiss-Prot
Match: ASK12_ARATH (SKP1-like protein 12 OS=Arabidopsis thaliana GN=ASK12 PE=1 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 3.631e-21 Identity = 48/62 (77.42%), Postives = 50/62 (80.65%), Query Frame = 2 Query: 2 FDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 187 F+LILAANYLNIK L DLTCQTVADMIKGKTPEEIR TFNI+NDFTP NQWAFE Sbjct: 91 FELILAANYLNIKSLFDLTCQTVADMIKGKTPEEIRSTFNIENDFTPEEEEAVRKENQWAFE 152
BLAST of DC900216 vs. ExPASy Swiss-Prot
Match: SKP1_XENLA (S-phase kinase-associated protein 1 OS=Xenopus laevis GN=skp1 PE=1 SV=3) HSP 1 Score: 92.8189 bits (229), Expect = 5.796e-19 Identity = 45/62 (72.58%), Postives = 50/62 (80.65%), Query Frame = 2 Query: 2 FDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 187 F+LILAANYL+IKGLLD+TC+TVA+MIKGKTPEEIRKTFNIKNDFT NQW E Sbjct: 101 FELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162
BLAST of DC900216 vs. ExPASy Swiss-Prot
Match: SKP1_RAT (S-phase kinase-associated protein 1 OS=Rattus norvegicus GN=Skp1 PE=2 SV=3) HSP 1 Score: 92.8189 bits (229), Expect = 5.796e-19 Identity = 45/62 (72.58%), Postives = 50/62 (80.65%), Query Frame = 2 Query: 2 FDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 187 F+LILAANYL+IKGLLD+TC+TVA+MIKGKTPEEIRKTFNIKNDFT NQW E Sbjct: 101 FELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162
BLAST of DC900216 vs. ExPASy Swiss-Prot
Match: SKP1_PONAB (S-phase kinase-associated protein 1 OS=Pongo abelii GN=SKP1 PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 5.796e-19 Identity = 45/62 (72.58%), Postives = 50/62 (80.65%), Query Frame = 2 Query: 2 FDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 187 F+LILAANYL+IKGLLD+TC+TVA+MIKGKTPEEIRKTFNIKNDFT NQW E Sbjct: 101 FELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162
BLAST of DC900216 vs. ExPASy Swiss-Prot
Match: SKP1_MOUSE (S-phase kinase-associated protein 1 OS=Mus musculus GN=Skp1 PE=1 SV=3) HSP 1 Score: 92.8189 bits (229), Expect = 5.796e-19 Identity = 45/62 (72.58%), Postives = 50/62 (80.65%), Query Frame = 2 Query: 2 FDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 187 F+LILAANYL+IKGLLD+TC+TVA+MIKGKTPEEIRKTFNIKNDFT NQW E Sbjct: 101 FELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162
BLAST of DC900216 vs. ExPASy Swiss-Prot
Match: SKP1_MACFA (S-phase kinase-associated protein 1 OS=Macaca fascicularis GN=SKP1 PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 5.796e-19 Identity = 45/62 (72.58%), Postives = 50/62 (80.65%), Query Frame = 2 Query: 2 FDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 187 F+LILAANYL+IKGLLD+TC+TVA+MIKGKTPEEIRKTFNIKNDFT NQW E Sbjct: 101 FELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162
BLAST of DC900216 vs. ExPASy Swiss-Prot
Match: SKP1_HUMAN (S-phase kinase-associated protein 1 OS=Homo sapiens GN=SKP1 PE=1 SV=2) HSP 1 Score: 92.8189 bits (229), Expect = 5.796e-19 Identity = 45/62 (72.58%), Postives = 50/62 (80.65%), Query Frame = 2 Query: 2 FDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 187 F+LILAANYL+IKGLLD+TC+TVA+MIKGKTPEEIRKTFNIKNDFT NQW E Sbjct: 101 FELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162 The following BLAST results are available for this feature:
BLAST of DC900216 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 29
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900216 ID=DC900216; Name=DC900216; organism=Citrus sinensis; type=EST; length=405bpback to top |