CN186066
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN186066 vs. ExPASy Swiss-Prot
Match: CUL3A_XENLA (Cullin-3-A OS=Xenopus laevis GN=cul3a PE=1 SV=1) HSP 1 Score: 226.868 bits (577), Expect = 1.039e-58 Identity = 126/236 (53.39%), Postives = 166/236 (70.34%), Query Frame = -2 Query: 149 EKFRSYYLGTHTGRRLSWQTNMGSADIKATF------------GKG---------QKHELNVSTYQMCVLMLFNNADRLSYREIEQATEIPASDLKRCLQSLACVRG-KNVLRKEPMSKDIGEDDAFFVNDKFTSKFYKVKIGTVVA-QKESEPEKQETRQRVEEDRKPQIEAAIVRIMKSRRVLDHNNIIAEVTKQLQSRFLANPTEIKKRIESLIERDFLERDNVDRKLYRYLA 787 E FR +YL H+GR+L+ Q +MGSAD+ ATF G G +KH L VST+QM +LMLFNN D+ ++ EI+Q T+IP +L R LQSLAC + + VL KEP SK+I F VND+FTSK ++VKI TV A Q ES+PE++ETRQ+V++DRK +IEAAIVRIMKSR+ + HN ++AEVT+QL++RFL +P IKKRIE LIER++L R DRK+Y Y+A Sbjct: 533 EIFRRFYLAKHSGRQLTLQHHMGSADLNATFYGPVKKEDGSEVGVGGAQVTGSNTRKHILQVSTFQMTILMLFNNRDKYTFEEIQQETDIPERELVRALQSLACGKPTQRVLTKEPKSKEIESGHMFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKVDDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLARTPEDRKVYTYVA 768
BLAST of CN186066 vs. ExPASy Swiss-Prot
Match: CUL3_XENTR (Cullin-3 OS=Xenopus tropicalis GN=cul3 PE=2 SV=1) HSP 1 Score: 225.328 bits (573), Expect = 3.024e-58 Identity = 125/236 (52.97%), Postives = 166/236 (70.34%), Query Frame = -2 Query: 149 EKFRSYYLGTHTGRRLSWQTNMGSADIKATF------------GKG---------QKHELNVSTYQMCVLMLFNNADRLSYREIEQATEIPASDLKRCLQSLACVRG-KNVLRKEPMSKDIGEDDAFFVNDKFTSKFYKVKIGTVVA-QKESEPEKQETRQRVEEDRKPQIEAAIVRIMKSRRVLDHNNIIAEVTKQLQSRFLANPTEIKKRIESLIERDFLERDNVDRKLYRYLA 787 E FR +YL H+GR+L+ Q +MGSAD+ ATF G G +KH L VST+QM +LMLFNN ++ ++ EI+Q T+IP +L R LQSLAC + + VL KEP SK+I F VND+FTSK ++VKI TV A Q ES+PE++ETRQ+V++DRK +IEAAIVRIMKSR+ + HN ++AEVT+QL++RFL +P IKKRIE LIER++L R DRK+Y Y+A Sbjct: 533 EIFRRFYLAKHSGRQLTLQHHMGSADLNATFYGPVKKEDGSEVGVGGAQVTGSNTRKHILQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLACGKPTQRVLTKEPKSKEIESGHMFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKVDDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLARTPEDRKVYTYVA 768
BLAST of CN186066 vs. ExPASy Swiss-Prot
Match: CUL3_MOUSE (Cullin-3 OS=Mus musculus GN=Cul3 PE=1 SV=1) HSP 1 Score: 225.328 bits (573), Expect = 3.024e-58 Identity = 125/236 (52.97%), Postives = 166/236 (70.34%), Query Frame = -2 Query: 149 EKFRSYYLGTHTGRRLSWQTNMGSADIKATF------------GKG---------QKHELNVSTYQMCVLMLFNNADRLSYREIEQATEIPASDLKRCLQSLACVRG-KNVLRKEPMSKDIGEDDAFFVNDKFTSKFYKVKIGTVVA-QKESEPEKQETRQRVEEDRKPQIEAAIVRIMKSRRVLDHNNIIAEVTKQLQSRFLANPTEIKKRIESLIERDFLERDNVDRKLYRYLA 787 E FR +YL H+GR+L+ Q +MGSAD+ ATF G G +KH L VST+QM +LMLFNN ++ ++ EI+Q T+IP +L R LQSLAC + + VL KEP SK+I F VND+FTSK ++VKI TV A Q ES+PE++ETRQ+V++DRK +IEAAIVRIMKSR+ + HN ++AEVT+QL++RFL +P IKKRIE LIER++L R DRK+Y Y+A Sbjct: 533 EIFRRFYLAKHSGRQLTLQHHMGSADLNATFYGPVKKEDGSEVGVGGAQVTGSNTRKHILQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLACGKPTQRVLTKEPKSKEIESGHIFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKVDDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLARTPEDRKVYTYVA 768
BLAST of CN186066 vs. ExPASy Swiss-Prot
Match: CUL3_HUMAN (Cullin-3 OS=Homo sapiens GN=CUL3 PE=1 SV=2) HSP 1 Score: 225.328 bits (573), Expect = 3.024e-58 Identity = 125/236 (52.97%), Postives = 166/236 (70.34%), Query Frame = -2 Query: 149 EKFRSYYLGTHTGRRLSWQTNMGSADIKATF------------GKG---------QKHELNVSTYQMCVLMLFNNADRLSYREIEQATEIPASDLKRCLQSLACVRG-KNVLRKEPMSKDIGEDDAFFVNDKFTSKFYKVKIGTVVA-QKESEPEKQETRQRVEEDRKPQIEAAIVRIMKSRRVLDHNNIIAEVTKQLQSRFLANPTEIKKRIESLIERDFLERDNVDRKLYRYLA 787 E FR +YL H+GR+L+ Q +MGSAD+ ATF G G +KH L VST+QM +LMLFNN ++ ++ EI+Q T+IP +L R LQSLAC + + VL KEP SK+I F VND+FTSK ++VKI TV A Q ES+PE++ETRQ+V++DRK +IEAAIVRIMKSR+ + HN ++AEVT+QL++RFL +P IKKRIE LIER++L R DRK+Y Y+A Sbjct: 533 EIFRRFYLAKHSGRQLTLQHHMGSADLNATFYGPVKKEDGSEVGVGGAQVTGSNTRKHILQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLACGKPTQRVLTKEPKSKEIENGHIFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKVDDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLARTPEDRKVYTYVA 768
BLAST of CN186066 vs. ExPASy Swiss-Prot
Match: CUL3B_XENLA (Cullin-3-B OS=Xenopus laevis GN=cul3b PE=1 SV=1) HSP 1 Score: 225.328 bits (573), Expect = 3.024e-58 Identity = 125/236 (52.97%), Postives = 166/236 (70.34%), Query Frame = -2 Query: 149 EKFRSYYLGTHTGRRLSWQTNMGSADIKATF------------GKG---------QKHELNVSTYQMCVLMLFNNADRLSYREIEQATEIPASDLKRCLQSLACVRG-KNVLRKEPMSKDIGEDDAFFVNDKFTSKFYKVKIGTVVA-QKESEPEKQETRQRVEEDRKPQIEAAIVRIMKSRRVLDHNNIIAEVTKQLQSRFLANPTEIKKRIESLIERDFLERDNVDRKLYRYLA 787 E FR +YL H+GR+L+ Q +MGSAD+ ATF G G +KH L VST+QM +LMLFNN ++ ++ EI+Q T+IP +L R LQSLAC + + VL KEP SK+I F VND+FTSK ++VKI TV A Q ES+PE++ETRQ+V++DRK +IEAAIVRIMKSR+ + HN ++AEVT+QL++RFL +P IKKRIE LIER++L R DRK+Y Y+A Sbjct: 533 EIFRRFYLAKHSGRQLTLQHHMGSADLNATFYGAVKKEDGSEVGVGGAQVTGSNTRKHILQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLACGKPTQRVLTKEPKSKEIESGHMFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKVDDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLARTPEDRKVYTYVA 768
BLAST of CN186066 vs. ExPASy Swiss-Prot
Match: CUL3_DICDI (Cullin-3 OS=Dictyostelium discoideum GN=culC PE=3 SV=1) HSP 1 Score: 218.779 bits (556), Expect = 2.830e-56 Identity = 120/247 (48.58%), Postives = 158/247 (63.97%), Query Frame = -2 Query: 149 CEKFRSYYLGTHTGRRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYREIEQATEIPASDLKRCLQSLACVRGKNVLRKEPM---------------------------------SKDIGEDDAFFVNDKFTSKFYKVKIGTVVAQKESEPEKQETRQRVEEDRKPQIEAAIVRIMKSRRVLDHNNIIAEVTKQLQSRFLANPTEIKKRIESLIERDFLERDNVDRKLYRYLA 790 CE F+SYYL H GR L WQTNMG+A+IKA F + HEL VS+YQM +L+LFN+ +L+++EI T IP DLKR L +L + K + R+ P SK I E D F N KF SK ++VK+ VV QKE+ E++ETR +V+EDRK QIEA+IVRIMK+R+ L+H+N+++EV KQLQSRF+ NP +KKRIESLIER++LER DRK+Y Y+A Sbjct: 525 CEAFKSYYLSNHNGRLLLWQTNMGTAEIKANF-PSKSHELQVSSYQMVILLLFNDQSKLTFKEIADQTGIPTIDLKRNLLALTNPKNKILDRELPSTTSSTTTTTTTATSSSTSTSPSSSSSSISTPTPSKSIDESDVFAFNTKFKSKLFRVKVMAVV-QKETPVEEKETRDKVDEDRKHQIEASIVRIMKARKTLEHSNLVSEVIKQLQSRFVPNPVIVKKRIESLIEREYLERSKQDRKIYNYMA 769
BLAST of CN186066 vs. ExPASy Swiss-Prot
Match: CUL4B_HUMAN (Cullin-4B OS=Homo sapiens GN=CUL4B PE=1 SV=3) HSP 1 Score: 189.119 bits (479), Expect = 2.402e-47 Identity = 101/215 (46.98%), Postives = 143/215 (66.51%), Query Frame = -2 Query: 149 LCEKFRSYYLGTHTGRRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYREIEQATEIPASDLKRCLQSLACVRGKNVLRKEPMSKDIGEDDAFFVNDKFTSKFYKVKIGTVVAQKESEPEKQETRQRVEEDRKPQIEAAIVRIMKSRRVLDHNNIIAEVTKQLQSRFLANPTEIKKRIESLIERDFLERDNVDRKLYRYLA 793 L E F+++YLG H+GR+L WQ+ +G +KA F +G+K EL VS +Q VL++FN + S EI+QAT I +L+R LQSLAC + + VL K P KDI + D F ND F K +++KI + KE+ E+ T +RV +DR+ QI+AAIVRIMK R+ L HN +++EV QL +F P ++KKRIESLI+RD++ERD + Y Y+A Sbjct: 686 LQEIFKTFYLGKHSGRKLQWQSTLGHCVLKAEFKEGKK-ELQVSLFQTLVLLMFNEGEEFSLEEIKQATGIEDGELRRTLQSLACGKAR-VLAKNPKGKDIEDGDKFICNDDFKHKLFRIKINQI-QMKETVEEQASTTERVFQDRQYQIDAAIVRIMKMRKTLSHNLLVSEVYNQL--KFPVKPADLKKRIESLIDRDYMERDKENPNQYNYIA 895
BLAST of CN186066 vs. ExPASy Swiss-Prot
Match: CUL3_CAEEL (Cullin-3 OS=Caenorhabditis elegans GN=cul-3 PE=1 SV=2) HSP 1 Score: 188.734 bits (478), Expect = 3.137e-47 Identity = 107/245 (43.67%), Postives = 152/245 (62.04%), Query Frame = -2 Query: 149 SALCEKFRSYYLGTHTGRRLSWQTNMGSADIKATF--------------------GKGQKHE------LNVSTYQMCVLMLFNNADRLSYREIEQATEIPASDLKRCLQSLACVRGKN--VLRKEPMSKDIGEDDAFFVNDKFTSKFYKVKIGTVVAQKESEPEKQETRQRVEEDRKPQIEAAIVRIMKSRRVLDHNNIIAEVTKQLQSRFLANPTEIKKRIESLIERDFLERDNVDRKLYRYLA 799 S E F YY HTGR+L+ T +G+AD+KATF G+ K L V+T+QM +L+ FN+ +R+S +++ +IP +LKR LQSLA + ++RK I D F VND F SK +VK+ V + ESEPE +ETRQ+VE+DRK ++EAAIVRIMK+R+ L+HNN++AEVT+QL+ RF+ +P IK+RIE+LIER++L RD D + Y+Y+A Sbjct: 533 SVAYEMFTQYYTEKHTGRKLTINTLLGNADVKATFYPPPKASMSNEENGPGPSSSGESMKERKPEHKILQVNTHQMIILLQFNHHNRISCQQLMDELKIPERELKRNLQSLALGKASQRILVRKNKGKDAIDMSDEFAVNDNFQSKLTRVKVQMVTGKVESEPEIRETRQKVEDDRKLEVEAAIVRIMKARKKLNHNNLVAEVTQQLRHRFMPSPIIIKQRIETLIEREYLARDEHDHRAYQYIA 777
BLAST of CN186066 vs. ExPASy Swiss-Prot
Match: CUL4A_HUMAN (Cullin-4A OS=Homo sapiens GN=CUL4A PE=1 SV=3) HSP 1 Score: 184.882 bits (468), Expect = 4.529e-46 Identity = 99/215 (46.05%), Postives = 144/215 (66.98%), Query Frame = -2 Query: 149 LCEKFRSYYLGTHTGRRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYREIEQATEIPASDLKRCLQSLACVRGKNVLRKEPMSKDIGEDDAFFVNDKFTSKFYKVKIGTVVAQKESEPEKQETRQRVEEDRKPQIEAAIVRIMKSRRVLDHNNIIAEVTKQLQSRFLANPTEIKKRIESLIERDFLERDNVDRKLYRYLA 793 L E F+++YLG H+GR+L WQT +G A +KA F +G+K E VS +Q VL++FN D S+ EI+ AT I S+L+R LQSLAC + + VL K P K++ + D F N +F K +++KI + KE+ E+ T +RV +DR+ QI+AAIVRIMK R+ L HN +++E+ QL +F P ++KKRIESLI+RD++ERD + Y Y+A Sbjct: 550 LQEVFKAFYLGKHSGRKLQWQTTLGHAVLKAEFKEGKK-EFQVSLFQTLVLLMFNEGDGFSFEEIKMATGIEDSELRRTLQSLACGKAR-VLIKSPKGKEVEDGDKFIFNGEFKHKLFRIKINQ-IQMKETVEEQVSTTERVFQDRQYQIDAAIVRIMKMRKTLGHNLLVSELYNQL--KFPVKPGDLKKRIESLIDRDYMERDKDNPNQYHYVA 759
BLAST of CN186066 vs. ExPASy Swiss-Prot
Match: CUL3_SCHPO (Cullin-3 OS=Schizosaccharomyces pombe GN=cul3 PE=1 SV=2) HSP 1 Score: 184.882 bits (468), Expect = 4.529e-46 Identity = 96/220 (43.64%), Postives = 144/220 (65.45%), Query Frame = -2 Query: 149 ALCEKFRSYYLGTHTGRRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADR---LSYREIEQATEIPASDLKRCLQSLACVRGKNVLRKEPMSKDIGEDDAFFVNDKFTSKFYKVKIGTVVAQK-ESEPEKQETRQRVEEDRKPQIEAAIVRIMKSRRVLDHNNIIAEVTKQLQSRFLANPTEIKKRIESLIERDFLERDNVDRKLYRYLA 796 A ++F +YL HTGR+L W +MGSAD++ F K +K++LNVST +L+LF + L + EI + T I DLKR LQSLAC + K +L K+P +++ D F+ N+ F S ++KI TV + E + E++ T ++V+E RK Q +A IVR+MK R+V +HN ++AEVT+QL RF +P IK+RIE+LIER++L+R + ++Y YLA Sbjct: 568 AQIDQFTDFYLSKHTGRKLLWYPSMGSADVRVNF-KDRKYDLNVSTIASVILLLFQDLKENQCLIFEEILEKTNIEVGDLKRNLQSLACAKYK-ILLKDPKGREVNAGDKFYFNENFVSNLARIKISTVAQTRVEDDSERKRTLEKVDESRKHQADACIVRVMKDRKVCEHNQLMAEVTRQLNPRFHPSPMMIKRRIEALIEREYLQRQADNGRIYEYLA 785 The following BLAST results are available for this feature:
BLAST of CN186066 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 36
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN186066 ID=CN186066; Name=CN186066; organism=Citrus sinensis; type=EST; length=800bpback to top |