CN186034
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN186034 vs. ExPASy Swiss-Prot
Match: NUD20_ARATH (Nudix hydrolase 20, chloroplastic OS=Arabidopsis thaliana GN=NUDT20 PE=2 SV=1) HSP 1 Score: 306.99 bits (785), Expect = 1.639e-94 Identity = 144/186 (77.42%), Postives = 165/186 (88.71%), Query Frame = 2 Query: 194 QLYPVTSTFGSPIFFSLERAAAPYFGIKAYGVHMNGYVEKDGQKFLWIGKRSQVKPTYPGMLDHLVAGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYMDINGFSYKRDVLFCYDLKLPEDFVPKNQDGEVESFQLIPVAHVANVIRRTEFFKPNCSLVIIDFLFRHGYICPGYFGYL 751 +LYPV +F +P+FFSLERAAAPYFGIK YGVHMNGYVE+DGQK LWIGKRS K TYPGMLDHLVAGGLPHGI+CG N++KECEEEAGI R+I++RA VGAVSY+DI+ + +KRDVLFCYDL+LPEDFVPKNQDGEVESF+LIPVA VA+VI++T FFK NCSLVIIDFLFRHG+I P GYL Sbjct: 177 ELYPVKPSFNAPVFFSLERAAAPYFGIKGYGVHMNGYVERDGQKLLWIGKRSLSKSTYPGMLDHLVAGGLPHGISCGGNLVKECEEEAGISRAIADRAIAVGAVSYLDIDQYCFKRDVLFCYDLELPEDFVPKNQDGEVESFKLIPVAQVASVIKKTSFFKANCSLVIIDFLFRHGFIRPESSGYL 362 HSP 2 Score: 61.2326 bits (147), Expect = 1.639e-94 Identity = 27/69 (39.13%), Postives = 45/69 (65.22%), Query Frame = 1 Query: 1 RVVGYTHNRFASHLRKYDDVFIYSENNG--GRFGSHLKLNSKLKTADERTRVVGEVIKCLGEEDLIPAL 201 ++VGY H RF +LR++ D+F +S+N R ++ LN L+ ++RTR V +VIK LG++ +IP + Sbjct: 106 QIVGYIHKRFTEYLREFHDIFTFSQNGSCPDRVDGYVTLNLMLQKPEDRTRAVADVIKILGDKGIIPGI 174
BLAST of CN186034 vs. ExPASy Swiss-Prot
Match: NUD24_ARATH (Nudix hydrolase 24, chloroplastic OS=Arabidopsis thaliana GN=NUDT24 PE=2 SV=1) HSP 1 Score: 283.878 bits (725), Expect = 5.234e-87 Identity = 132/186 (70.97%), Postives = 157/186 (84.41%), Query Frame = 2 Query: 194 QLYPVTSTFGSPIFFSLERAAAPYFGIKAYGVHMNGYVEKDGQKFLWIGKRSQVKPTYPGMLDHLVAGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYMDINGFSYKRDVLFCYDLKLPEDFVPKNQDGEVESFQLIPVAHVANVIRRTEFFKPNCSLVIIDFLFRHGYICPGYFGYL 751 +LYPV +F +P FFS+ERAAAPYFG+K Y +H+NGYVE+DGQKFLWIGKRS K TYPG LDHLVAGGLPHGI+ EN++KECEEEAGI + +++RA VG VSYMDI+ + + RDVLFCYDL+LP+DFVP NQDGEV+SF+LIPVA VANV+R+T FFK +CSLVIIDFLFRHG I P GYL Sbjct: 168 ELYPVKPSFNAPAFFSIERAAAPYFGLKGYAIHVNGYVERDGQKFLWIGKRSLAKSTYPGKLDHLVAGGLPHGISVCENLVKECEEEAGISKVLADRAIAVGVVSYMDIDRYCFTRDVLFCYDLELPQDFVPTNQDGEVDSFRLIPVAQVANVVRKTSFFKDSCSLVIIDFLFRHGLIRPESPGYL 353 HSP 2 Score: 59.3066 bits (142), Expect = 5.234e-87 Identity = 27/67 (40.30%), Postives = 41/67 (61.19%), Query Frame = 1 Query: 1 RVVGYTHNRFASHLRKYDDVFIYSENNGGRFGSHLKLNSKLKTADERTRVVGEVIKCLGEEDLIPAL 201 ++VGY H F +LR ++D+F +S+ +G H+ LN L +ERTR V VIK LG + +IP + Sbjct: 104 QIVGYIHKGFTKYLRDFNDIFTFSQ-----YGGHVTLNMMLDKPEERTRAVAHVIKILGNKGIIPGI 165
BLAST of CN186034 vs. ExPASy Swiss-Prot
Match: YJ9J_YEAST (Uncharacterized protein YJR142W OS=Saccharomyces cerevisiae GN=YJR142W PE=1 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.367e-33 Identity = 79/178 (44.38%), Postives = 109/178 (61.24%), Query Frame = 2 Query: 242 LERAAAPYFGIKAYGVHMNGYV--EKDGQKFLWIGKRSQVKPTYPGMLDHLVAGGLPHGIACGENIIKECEEEAGIPRS-ISNRARPVGAVSYMDING------FSYKRD-----VLFCYDLKLPEDFVPKNQDGEVESFQLIPVAHVANVIRRTEFFKPNCSLVIIDFLFRHGYICP 733 +ERA A GI YG+H+NGYV K + W+ +RS+ K T+P MLD+++AGGL + E ++KE EEA + +S I + + G+VSY+ G F+ + D V + YDLKL ED +PK DGEVESF L + N +R+ E FKPNC+LV++DFL RHGYI P Sbjct: 143 VERAVAGVLGIITYGIHINGYVLDPKSKKVQFWVPRRSKTKQTWPLMLDNIIAGGLGYPYGIYETVLKESMEEANLEKSVIEDNIKATGSVSYLYFTGDISVTKFNKESDFIVGEVQYVYDLKLSEDIIPKPNDGEVESFNLFSLQETINALRKKE-FKPNCALVMVDFLIRHGYITP 319
BLAST of CN186034 vs. ExPASy Swiss-Prot
Match: TNR3_SCHPO (Thiamine pyrophosphokinase OS=Schizosaccharomyces pombe GN=tnr3 PE=2 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 4.408e-24 Identity = 68/189 (35.98%), Postives = 105/189 (55.56%), Query Frame = 2 Query: 194 QLYPVTSTFGSPIFFSLERAAAPYFGIKAYGVHMNGYVE--KDGQKFLWIGKRSQVKPTYPGMLDHLVAGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYMDINGFSY-KRDVLFCYDLKLPEDFVPKNQDGEVESFQLIPVAHVANVIRRTEFFKPNCSLVIIDFLFRHGYICPGYFGYL 751 +LY V P+ ++ER FG + GVH Y+ K+ +W+ +RS K T+P LD+ VAGG+ HG + +IKE EEA + S N P G VSY+ + + + ++ + +DL + + +P+ DGEV F L+P+ V + + + FKPNC+LV++DFL RHG I P + YL Sbjct: 107 ELYTVYGKSKKPVL-AVERGGFWLFGFLSTGVHCTMYIPATKEHPLRIWVPRRSPTKQTWPNYLDNSVAGGIAHGDSVIGTMIKEFSEEANLDVSSMNLI-PCGTVSYIKMEKRHWIQPELQYVFDLPVDDLVIPRINDGEVAGFSLLPLNQVLHEL-ELKSFKPNCALVLLDFLIRHGIITPQHPQYL 292 The following BLAST results are available for this feature:
BLAST of CN186034 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN186034 ID=CN186034; Name=CN186034; organism=Citrus sinensis; type=EST; length=753bpback to top |