CN186031
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN186031 vs. ExPASy Swiss-Prot
Match: RH7_ARATH (DEAD-box ATP-dependent RNA helicase 7 OS=Arabidopsis thaliana GN=RH7 PE=1 SV=2) HSP 1 Score: 107.071 bits (266), Expect = 1.168e-22 Identity = 52/87 (59.77%), Postives = 73/87 (83.91%), Query Frame = -3 Query: 480 LRDHVTVVLEAGKPIYTPSFAFGVLRRFLPEEKVELVKGMALTADGNGAVFDVPVADLDLFRSGAD-NAANVSLEVLKQLPPLQERE 737 + ++VT+ LEAGKPIY+PSF +G+LRR LP++KVE+++G++LTAD GAVFDV +DLDLF +GA +A ++SLEV+K +P LQERE Sbjct: 543 MENYVTLHLEAGKPIYSPSFVYGLLRRVLPDDKVEMIEGLSLTADKTGAVFDVKQSDLDLFIAGAQKSAGSMSLEVVKVMPKLQERE 629
BLAST of CN186031 vs. ExPASy Swiss-Prot
Match: RH7_SPIOL (DEAD-box ATP-dependent RNA helicase 7 OS=Spinacia oleracea GN=RH7 PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.687e-21 Identity = 49/87 (56.32%), Postives = 68/87 (78.16%), Query Frame = -3 Query: 477 LRDHVTVVLEAGKPIYTPSFAFGVLRRFLPEEKVELVKGMALTADGNGAVFDVPVADLDLFRSGADNAANVSLEVLKQLPPLQEREQ 737 + +VT++L+AG+P Y SFA+ VL+RFLP K + + G+ALTAD +GAVFDVPV DL+ F GA+NAA V+L+V+K LPPL+E+ Q Sbjct: 554 MEGYVTLLLDAGRPFYGQSFAYTVLKRFLPATKADSIMGVALTADKSGAVFDVPVDDLETFLVGAENAAGVNLDVVKALPPLEEKVQ 640
BLAST of CN186031 vs. ExPASy Swiss-Prot
Match: RH7_ORYSJ (DEAD-box ATP-dependent RNA helicase 7 OS=Oryza sativa subsp. japonica GN=Os09g0520700 PE=2 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.436e-20 Identity = 45/85 (52.94%), Postives = 64/85 (75.29%), Query Frame = -3 Query: 477 DHVTVVLEAGKPIYTPSFAFGVLRRFLPEEKVELVKGMALTADGNGAVFDVPVADLDLFRSGADNAANVSLEVLKQLPPLQEREQ 731 +H T++L+ G+ +Y F L+RF+PEE++ VKG+ +TADG GAVFDVP A+++ + GA NAA V++E +KQLPPLQEREQ Sbjct: 565 NHTTLLLQTGRSVYAAGFVLSTLKRFMPEERLADVKGITITADGTGAVFDVPSAEVEDYIQGAQNAAMVTVEEVKQLPPLQEREQ 649 The following BLAST results are available for this feature:
BLAST of CN186031 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN186031 ID=CN186031; Name=CN186031; organism=Citrus sinensis; type=EST; length=790bpback to top |