CN185888
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185888 vs. ExPASy Swiss-Prot
Match: XTH27_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 27 OS=Arabidopsis thaliana GN=XTH27 PE=2 SV=2) HSP 1 Score: 104.375 bits (259), Expect = 6.675e-22 Identity = 61/153 (39.87%), Postives = 89/153 (58.17%), Query Frame = 3 Query: 246 DSNSITLTFDHRGGARWRSTTRFLYGTFSSLIQCPKGNTSGLNFNIYLSSLE-GDKSQDEIDFEFLG---KDKTIVQTNYYTTGT--GNREEIHDLGFDCSEGFHEYVIKWGPDLIQWLIDGKVVRRAERNE--GEGFPNKPMFLYASVWDAS 680 D S+ LT D R G+ + S +L+G FS+ I+ P T+G+ Y+S+ + +K+ DEIDFEFLG + + VQTN Y G+ REE ++L FD +E FH+Y I W I + +D +R +R G FP+KPM LY ++WD S Sbjct: 49 DGKSVRLTLDERTGSGFVSNDYYLHGFFSASIKLPSDYTAGVVVAFYMSNGDMYEKNHDEIDFEFLGNIREKEWRVQTNIYGNGSTHSGREERYNLWFDPTEDFHQYSILWSDSHIIFFVDNVPIREVKRTAEMGGHFPSKPMSLYTTIWDGS 201
BLAST of CN185888 vs. ExPASy Swiss-Prot
Match: XTH28_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 28 OS=Arabidopsis thaliana GN=XTH28 PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.326e-21 Identity = 61/153 (39.87%), Postives = 89/153 (58.17%), Query Frame = 3 Query: 246 DSNSITLTFDHRGGARWRSTTRFLYGTFSSLIQCPKGNTSGLNFNIYLSSLE-GDKSQDEIDFEFLGK---DKTIVQTNYYTTGTGN--REEIHDLGFDCSEGFHEYVIKWGPDLIQWLIDGKVVRRAERNEGEG--FPNKPMFLYASVWDAS 680 D S+ LT D R G+ + S +L+G FSS I+ P ++G+ YLS+ + +K+ DEIDFEFLG + +QTN Y G+ + REE ++L FD +E FH+Y I W I + +D +R +R G FP KPM LY+++WD S Sbjct: 49 DGKSVRLTLDERTGSGFVSNDIYLHGFFSSSIKLPADYSAGVVIAFYLSNGDLYEKNHDEIDFEFLGNIRGREWRIQTNIYGNGSTHLGREERYNLWFDPTEDFHQYSILWSLSHIIFYVDNVPIREVKRTASMGGDFPAKPMSLYSTIWDGS 201
BLAST of CN185888 vs. ExPASy Swiss-Prot
Match: GUB_PAEMA (Beta-glucanase OS=Paenibacillus macerans PE=1 SV=2) HSP 1 Score: 101.293 bits (251), Expect = 5.650e-21 Identity = 55/146 (37.67%), Postives = 76/146 (52.05%), Query Frame = 3 Query: 288 ARWRSTTRFLYGTFSSLIQCPKGNTSGLNFNIYLSSLEGDKSQDEIDFEFLGKDKTIVQTNYYTTGTGNREEIHDLGFDCSEGFHEYVIKWGPDLIQWLIDGKVVRRAERNEGEGFPNKPMFLYASVWDASHIDKARWCGPYVGCD 725 A +RST + YG + ++ K +F Y G + DEID EFLGKD T VQ NYYT G G E++ LGFD S+GFH Y W P I+W +DG + A N P+ P + ++W+ + +D W G Y G + Sbjct: 85 AEYRSTNIYGYGLYEVSMKPAKNTGIVSSFFTYTGPAHGTQ-WDEIDIEFLGKDTTKVQFNYYTNGVGGHEKVISLGFDASKGFHTYAFDWQPGYIKWYVDGVLKHTATAN----IPSTPGKIMMNLWNGTGVDD--WLGSYNGAN 223
BLAST of CN185888 vs. ExPASy Swiss-Prot
Match: XTH17_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 17 OS=Arabidopsis thaliana GN=XTH17 PE=2 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.259e-20 Identity = 60/167 (35.93%), Postives = 85/167 (50.90%), Query Frame = 3 Query: 237 HCADSNSITLTFDHRGGARWRSTTRFLYGTFSSLIQCPKGNTSGLNFNIYLSSLEGDKSQDEIDFEFLGK---DKTIVQTNYYTTGTGNREEIHDLGFDCSEGFHEYVIKWGPDLIQWLIDGKVVRRAERNEGEGFP---NKPMFLYASVWDASH------IDKARW 701 H D ++L+ D G+ ++S FLYG ++ GN++G YL S + DEIDFEFLG + TN YT GTG++E+ L FD + FH Y I W P I + +DG +R + E G P +PM LYAS+W+A H ++K W Sbjct: 45 HDRDGKLLSLSLDKSSGSGFQSNQEFLYGKAEVQMKLVPGNSAGTVTTFYLKS--PGTTWDEIDFEFLGNISGHPYTLHTNVYTKGTGDKEQQFHLWFDPTVNFHTYCITWNPQRIIFTVDGIPIREFKNPEAIGVPFPTRQPMRLYASLWEAEHWATRGGLEKTDW 209
BLAST of CN185888 vs. ExPASy Swiss-Prot
Match: XTH21_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 21 OS=Arabidopsis thaliana GN=XTH21 PE=2 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.804e-20 Identity = 69/208 (33.17%), Postives = 103/208 (49.52%), Query Frame = 3 Query: 132 VVTLELEMADPVVQSLHQTEPIKEIAIDYTPEACTHCADSNSITLTFDHRGGARWRSTTRFLYGTFSSLIQCPKGNTSGLNFNIYLSSLEGDKSQDEIDFEFLGK---DKTIVQTNYYTTGTGNREEIHDLGFDCSEGFHEYVIKWGPDLIQWLIDGKVVRRAERNE--GEGFP-NKPMFLYASVWDASH------IDKARWC-GPYV 716 V+++ L + ++ +H + ++I I + + + L D G+ ++S +LYG I+ GN++G YL S + DEIDFEFLG D IV TN YT G G+RE+ L FD + FH Y I W P I + IDGK +R + E G +P N+PM +Y S+W+A + K W GP+V Sbjct: 8 VMSISLFLGLSILLVVHGKDFNQDIDITWGDGRGNILNNGTLLNLGLDQSSGSGFQSKAEYLYGKVDMQIKLVPGNSAGTVTTFYLKSQ--GLTWDEIDFEFLGNVSGDPYIVHTNVYTQGKGDREQQFYLWFDPTAAFHNYSILWNPSHIVFYIDGKPIREFKNLEVLGVAYPKNQPMRMYGSLWNADDWATRGGLVKTNWSQGPFV 213
BLAST of CN185888 vs. ExPASy Swiss-Prot
Match: GUB_PAEPO (Beta-glucanase OS=Paenibacillus polymyxa GN=gluB PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.662e-20 Identity = 54/144 (37.50%), Postives = 74/144 (51.39%), Query Frame = 3 Query: 294 WRSTTRFLYGTFSSLIQCPKGNTSGLNFNIYLSSLEGDKSQDEIDFEFLGKDKTIVQTNYYTTGTGNREEIHDLGFDCSEGFHEYVIKWGPDLIQWLIDGKVVRRAERNEGEGFPNKPMFLYASVWDASHIDKARWCGPYVGCD 725 +RST + YG + ++ K +F Y G + DEID EFLGKD T VQ NYYT G G E+I +LGFD S FH Y W P I+W +DG + A N P+ P + ++W+ + +D W G Y G + Sbjct: 88 YRSTNNYGYGLYEVSMKPAKNTGIVSSFFTYTGPSHGTQ-WDEIDIEFLGKDTTKVQFNYYTNGVGGHEKIINLGFDASTSFHTYAFDWQPGYIKWYVDGVLKHTATTN----IPSTPGKIMMNLWNGTGVDS--WLGSYNGAN 224
BLAST of CN185888 vs. ExPASy Swiss-Prot
Match: XTH32_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 32 OS=Arabidopsis thaliana GN=XTH32 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.783e-20 Identity = 59/155 (38.06%), Postives = 85/155 (54.84%), Query Frame = 3 Query: 246 DSNSITLTFDHRGGARWRSTTRFLYGTFSSLIQCPKGNTSGLNFNIYLSSLEGDKS-QDEIDFEFLG----KDKTIVQTNYYTTGTGN-----REEIHDLGFDCSEGFHEYVIKWGPDLIQWLIDGKVVRRAERNEGEGFPNKPMFLYASVWDAS 680 D N++T+ D G+ ++S F G F + I+ G T+G+ ++YLS+ E DE+D EFLG K T+ QTN Y G+G+ RE L FD ++ FH Y I W P I +L+D +RR + FP +PM+LY S+WDAS Sbjct: 59 DQNALTIWLDRTSGSGFKSVKPFRSGYFGANIKLQPGYTAGVITSLYLSNNEAHPGFHDEVDIEFLGTTFGKPYTL-QTNVYIRGSGDGKIIGREMKFRLWFDPTKDFHHYAILWSPREIIFLVDDIPIRRYPKKSASTFPLRPMWLYGSIWDAS 212
BLAST of CN185888 vs. ExPASy Swiss-Prot
Match: XTH18_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 18 OS=Arabidopsis thaliana GN=XTH18 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.783e-20 Identity = 58/164 (35.37%), Postives = 85/164 (51.83%), Query Frame = 3 Query: 246 DSNSITLTFDHRGGARWRSTTRFLYGTFSSLIQCPKGNTSGLNFNIYLSSLEGDKSQDEIDFEFLGK---DKTIVQTNYYTTGTGNREEIHDLGFDCSEGFHEYVIKWGPDLIQWLIDGKVVRRAERNEGEGFP---NKPMFLYASVWDASH------IDKARW 701 D ++L+ D G+ ++S FLYG ++ GN++G YL S + DEIDFEFLG + TN YT G+G++E+ L FD + FH Y I W P I + +DG +R + +E G P +PM LYAS+W+A H ++K W Sbjct: 48 DGKLLSLSLDKSSGSGFQSNQEFLYGKAEVQMKLVPGNSAGTVTTFYLKS--PGTTWDEIDFEFLGNLSGHPYTLHTNVYTKGSGDKEQQFHLWFDPTVNFHTYCITWNPQRIIFTVDGIPIREFKNSESIGVPFPTKQPMRLYASLWEAEHWATRGGLEKTDW 209
BLAST of CN185888 vs. ExPASy Swiss-Prot
Match: XTH20_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 20 OS=Arabidopsis thaliana GN=XTH20 PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 6.247e-20 Identity = 59/162 (36.42%), Postives = 86/162 (53.09%), Query Frame = 3 Query: 252 NSITLTFDHRGGARWRSTTRFLYGTFSSLIQCPKGNTSGLNFNIYLSSLEGDKSQDEIDFEFLGK---DKTIVQTNYYTTGTGNREEIHDLGFDCSEGFHEYVIKWGPDLIQWLIDGKVVRRAERNEGEGFP---NKPMFLYASVWDASH------IDKARW 701 N ++L+ D G+ ++S FLYG ++ GN++G YL S + DEIDFEFLG + TN YT GTG++E+ L FD + FH Y I W P + + IDG +R + +E G P ++PM LYAS+W+A H ++K W Sbjct: 50 NLLSLSLDKFSGSGFQSHQEFLYGKVEVQMKLVPGNSAGTVTTFYLKS--PGTTWDEIDFEFLGNISGHPYTLHTNVYTKGTGDKEQQFHLWFDPTVDFHTYCIIWNPQRVIFTIDGIPIREFKNSEALGVPFPKHQPMRLYASLWEAEHWATRGGLEKTDW 209
BLAST of CN185888 vs. ExPASy Swiss-Prot
Match: GUB_BACSU (Beta-glucanase OS=Bacillus subtilis GN=bglS PE=1 SV=2) HSP 1 Score: 97.0561 bits (240), Expect = 1.066e-19 Identity = 52/141 (36.88%), Postives = 73/141 (51.77%), Query Frame = 3 Query: 297 RSTTRFLYGTFSSLIQCPKGNTSGLNFNIYLSSLEGDKSQDEIDFEFLGKDKTIVQTNYYTTGTGNREEIHDLGFDCSEGFHEYVIKWGPDLIQWLIDGKVVRRAERNEGEGFPNKPMFLYASVWDASHIDKARWCGPYVG 719 RS + YG + ++ K +F Y +G DEID EFLGKD T VQ NYYT G GN E+I DLGFD + +H Y W P+ I+W +DG++ A P P + ++W+ + +D+ W G Y G Sbjct: 93 RSVQTYGYGLYEVRMKPAKNTGIVSSFFTYTGPTDGTP-WDEIDIEFLGKDTTKVQFNYYTNGAGNHEKIVDLGFDAANAYHTYAFDWQPNSIKWYVDGQLKHTATNQ----IPTTPGKIMMNLWNGTGVDE--WLGSYNG 226 The following BLAST results are available for this feature:
BLAST of CN185888 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185888 ID=CN185888; Name=CN185888; organism=Citrus sinensis; type=EST; length=732bpback to top |