CN185818
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN185818 vs. ExPASy Swiss-Prot
Match: SERC2_MOUSE (Serine incorporator 2 OS=Mus musculus GN=Serinc2 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.131e-14 Identity = 38/73 (52.05%), Postives = 50/73 (68.49%), Query Frame = -3 Query: 175 VTYSYAFFHIIFSLASMYSAMLLTGWSTSVGESGKLVDVGWPSVWVRILTGWATAALYMWSLVAPILFPDREF 393 VTYSY+FFH LAS++ M LT W S GE+ K++ W SVWV+I WA LY+W+LVAP+L P+R+F Sbjct: 379 VTYSYSFFHFCLVLASLHVMMTLTNWY-SPGETRKMIST-WTSVWVKICASWAGLFLYLWTLVAPLLLPNRDF 449
BLAST of CN185818 vs. ExPASy Swiss-Prot
Match: YK17_SCHPO (Membrane protein PB1A10.07c OS=Schizosaccharomyces pombe GN=SPAPB1A10.07c PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.520e-14 Identity = 58/207 (28.02%), Postives = 91/207 (43.96%), Query Frame = -3 Query: 181 MTLILAFIFAVVALHPAVG-----GSILPASVISLYCMYLCYSGLSSEPRDYECNGLHRHSKAXXXXXXXXXXXXXXXXXVYSAVRAGXXXXXXXXXXXPRA-----GGGKPLLPMXXXXXXXXXXXXKPVTYSYAFFHIIFSLASMYSAMLLTGWST-SVGESGK---LVDVG--WPSVWVRILTGWATAALYMWSLVAPILFPDR 753 + L+L + +++HP + + +S++ Y YL S L++ P + +CN + +YSAVRA A G PL Y++ +FHI+F LA+ Y+A LLT W+T SV E+ K V +G + +VWV+I+T W LY+WS +AP+ FP R Sbjct: 238 INLLLCIAVSCLSVHPTIQEYNPRSGLAQSSMVMCYTCYLILSALANRPDEGQCNPWGNSASGTREFSKVIGAAFTFFTILYSAVRAASSRESDDSYSYLYADSHDMGVSTPL------EDGSSEEDKHQSDYNFIWFHIVFVLAAFYTASLLTNWNTTSVYENQKNDVFVRIGFSYAAVWVKIITSWVCHGLYVWSCLAPVFFPYR 438
BLAST of CN185818 vs. ExPASy Swiss-Prot
Match: SERIC_DICDI (Probable serine incorporator OS=Dictyostelium discoideum GN=serinc PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 4.299e-14 Identity = 57/213 (26.76%), Postives = 86/213 (40.38%), Query Frame = -3 Query: 181 NTFFIVMTLILAFIFAVVALHPAV-----GGSILPASVISLYCMYLCYSGLSSEPRDYECNGLHRHSKAXXXXXXXXXXXXXXXXXVYSAVRAGXXXXXXXXXXXPRAGGGKPLLPMXXXXXXXXXXXXKPVTYSYAFFHIIFSLASMYSAMLLTGW-----------STSVGESGKLVDVGWPSVWVRILTGWATAALYMWSLVAPILFPDR 771 N F+IV L + I V+++ V + + V+ LYC YL YS ++SEP C+ ++ + YSA R+ + P Y+Y+FFH F+ +MY + LLT W STS S VD G SVWV++++ W LY+W+L+ PIL +R Sbjct: 209 NQFYIVFNLGICLIVGVLSISEKVREYRPSSGLFQSGVVMLYCTYLIYSAINSEPPG-TCSS--NNTSSPKESTIIIGAVFTIISVCYSAFRSSDSTELLGNHNHYSSIPTDPNAETTGVADDECEC----TAYNYSFFHFTFACGAMYLSALLTNWATMTSTDITSSSTSSSNSTISVDSGMVSVWVKVVSSWVVVLLYLWTLIGPILLRNR 414
BLAST of CN185818 vs. ExPASy Swiss-Prot
Match: SERC2_BOVIN (Serine incorporator 2 OS=Bos taurus GN=SERINC2 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.251e-13 Identity = 35/73 (47.95%), Postives = 49/73 (67.12%), Query Frame = -3 Query: 175 VTYSYAFFHIIFSLASMYSAMLLTGWSTSVGESGKLVDVGWPSVWVRILTGWATAALYMWSLVAPILFPDREF 393 VTYSY+FFH+ LAS++ M LT W GE+ K++ W +VWV+I W LY+W+LVAP+L P+R+F Sbjct: 381 VTYSYSFFHLCLVLASVHIMMTLTNWYRP-GETRKMIST-WTAVWVKICASWTGLLLYLWTLVAPLLLPNRDF 451
BLAST of CN185818 vs. ExPASy Swiss-Prot
Match: SERIC_NEMVE (Probable serine incorporator OS=Nematostella vectensis GN=serinc PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.787e-13 Identity = 32/73 (43.84%), Postives = 45/73 (61.64%), Query Frame = -3 Query: 175 VTYSYAFFHIIFSLASMYSAMLLTGWSTSVGESGKLVDVGWPSVWVRILTGWATAALYMWSLVAPILFPDREF 393 V YSY+F+H + LAS+Y M LT W VG + +VWV+I + W +Y+W+L+AP LFPDR+F Sbjct: 383 VAYSYSFYHFMLMLASLYIMMTLTNWYKPVGSDFSKLQYSETAVWVKIASSWLCQLIYIWTLLAPALFPDRDF 455
BLAST of CN185818 vs. ExPASy Swiss-Prot
Match: SERIC_MONBE (Probable serine incorporator OS=Monosiga brevicollis GN=serinc PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.787e-13 Identity = 30/73 (41.10%), Postives = 51/73 (69.86%), Query Frame = -3 Query: 175 VTYSYAFFHIIFSLASMYSAMLLTGWSTSVGESGKLVDVGWPSVWVRILTGWATAALYMWSLVAPILFPDREF 393 V YS++FFH+ F++A++Y M+LT W +S ++ + GW SVWV++++ W LY W+++AP+ PDR+F Sbjct: 412 VRYSWSFFHLTFAVAALYLMMVLTEWDSS--DADVRIGKGWASVWVQVVSSWVIFLLYGWTMMAPVCLPDRDF 482
BLAST of CN185818 vs. ExPASy Swiss-Prot
Match: SERC2_HUMAN (Serine incorporator 2 OS=Homo sapiens GN=SERINC2 PE=2 SV=2) HSP 1 Score: 74.7146 bits (182), Expect = 6.208e-13 Identity = 35/73 (47.95%), Postives = 48/73 (65.75%), Query Frame = -3 Query: 175 VTYSYAFFHIIFSLASMYSAMLLTGWSTSVGESGKLVDVGWPSVWVRILTGWATAALYMWSLVAPILFPDREF 393 VTYSY+FFH LAS++ M LT W GE+ K++ W +VWV+I WA LY+W+LVAP+L +R+F Sbjct: 385 VTYSYSFFHFCLVLASLHVMMTLTNWYKP-GETRKMIST-WTAVWVKICASWAGLLLYLWTLVAPLLLRNRDF 455
BLAST of CN185818 vs. ExPASy Swiss-Prot
Match: SERC1_RAT (Serine incorporator 1 OS=Rattus norvegicus GN=Serinc1 PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.171e-11 Identity = 32/73 (43.84%), Postives = 46/73 (63.01%), Query Frame = -3 Query: 175 VTYSYAFFHIIFSLASMYSAMLLTGWSTSVGESGKLVDVGWPSVWVRILTGWATAALYMWSLVAPILFPDREF 393 VTYSY+FFH + LAS+Y M LT W E + + W +VWV+I + W LY+W+LVAP++ +R+F Sbjct: 382 VTYSYSFFHFMLFLASLYIMMTLTNWYRY--EPSREMKSQWTAVWVKISSSWIGIVLYVWTLVAPLVLTNRDF 452
BLAST of CN185818 vs. ExPASy Swiss-Prot
Match: SERC1_PONAB (Serine incorporator 1 OS=Pongo abelii GN=SERINC1 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.171e-11 Identity = 32/73 (43.84%), Postives = 46/73 (63.01%), Query Frame = -3 Query: 175 VTYSYAFFHIIFSLASMYSAMLLTGWSTSVGESGKLVDVGWPSVWVRILTGWATAALYMWSLVAPILFPDREF 393 VTYSY+FFH + LAS+Y M LT W E + + W +VWV+I + W LY+W+LVAP++ +R+F Sbjct: 382 VTYSYSFFHFMLFLASLYIMMTLTNWYRY--EPSREMKSQWTAVWVKISSSWIGIVLYVWTLVAPLVLTNRDF 452
BLAST of CN185818 vs. ExPASy Swiss-Prot
Match: SERC1_MOUSE (Serine incorporator 1 OS=Mus musculus GN=Serinc1 PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.171e-11 Identity = 32/73 (43.84%), Postives = 46/73 (63.01%), Query Frame = -3 Query: 175 VTYSYAFFHIIFSLASMYSAMLLTGWSTSVGESGKLVDVGWPSVWVRILTGWATAALYMWSLVAPILFPDREF 393 VTYSY+FFH + LAS+Y M LT W E + + W +VWV+I + W LY+W+LVAP++ +R+F Sbjct: 382 VTYSYSFFHFMLFLASLYIMMTLTNWYRY--EPSREMKSQWTAVWVKISSSWIGLVLYVWTLVAPLVLTNRDF 452 The following BLAST results are available for this feature:
BLAST of CN185818 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185818 ID=CN185818; Name=CN185818; organism=Citrus sinensis; type=EST; length=773bpback to top |