CN185603

Overview
NameCN185603
Unique NameCN185603
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length763
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185603 vs. ExPASy Swiss-Prot
Match: Y1561_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56130 OS=Arabidopsis thaliana GN=At1g56130 PE=1 SV=2)

HSP 1 Score: 158.303 bits (399), Expect = 4.227e-38
Identity = 83/150 (55.33%), Postives = 108/150 (72.00%), Query Frame = -2
Query:  313 ISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRELILLVDTSLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTVVQMLMGEKDIDDDKITKPGLISDF 762
            ISDFGLAKL     TH+STRVAGTIGYLAPEYA+RG +T K D+Y+FGV+ +E+VSGR N++  L  E++YLLE  W+L+E+   I L+D  L  DF+ EEA R + + LLCTQ +  LRP MS VV ML G+ +I  D  +KPG +SD+
Sbjct:  834 ISDFGLAKLYDDKKTHISTRVAGTIGYLAPEYAMRGHLTEKTDVYAFGVVALELVSGRPNSDENLEEEKKYLLEWAWNLHEKSRDIELIDDKLT-DFNMEEAKRMIGIALLCTQTSHALRPPMSRVVAMLSGDVEI-GDVTSKPGYVSDW 981          
BLAST of CN185603 vs. ExPASy Swiss-Prot
Match: Y5614_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana GN=At1g56140 PE=1 SV=2)

HSP 1 Score: 152.525 bits (384), Expect = 2.319e-36
Identity = 77/150 (51.33%), Postives = 107/150 (71.33%), Query Frame = -2
Query:  313 ISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRELILLVDTSLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTVVQMLMGEKDIDDDKITKPGLISDF 762
            +SDFGLAKL     TH+STRVAGTIGYLAPEYA+RG +T K D+Y+FGV+ +E+VSGR N++  L  E++YLLE  W+L+E+   + L+D  L  +F+ EE  R + + LLCTQ +  LRP MS VV ML G+ ++  D  +KPG ++D+
Sbjct:  833 VSDFGLAKLYDDKKTHISTRVAGTIGYLAPEYAMRGHLTEKTDVYAFGVVALELVSGRPNSDENLEDEKRYLLEWAWNLHEKGREVELIDHQLT-EFNMEEGKRMIGIALLCTQTSHALRPPMSRVVAMLSGDVEV-SDVTSKPGYLTDW 980          
BLAST of CN185603 vs. ExPASy Swiss-Prot
Match: Y5344_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53440 OS=Arabidopsis thaliana GN=At1g53440 PE=1 SV=2)

HSP 1 Score: 147.517 bits (371), Expect = 7.461e-35
Identity = 76/133 (57.14%), Postives = 94/133 (70.68%), Query Frame = -2
Query:  364 ISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRELILLVDTSLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTVVQMLMGE 762
            ISDFGLAKL     TH+STR+AGTIGY+APEYA+RG +T KAD+YSFGV+ +EIVSG+ NTN R   E  YLL+  + L E+  L+ LVD  L   F  +EA R L + LLCT  +P LRP MS+VV ML G+
Sbjct:  809 ISDFGLAKLDEEENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVCLEIVSGKSNTNYRPKEEFIYLLDWAYVLQEQGSLLELVDPDLGTSFSKKEAMRMLNIALLCTNPSPTLRPPMSSVVSMLQGK 941          
BLAST of CN185603 vs. ExPASy Swiss-Prot
Match: Y5343_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53430 OS=Arabidopsis thaliana GN=At1g53430 PE=1 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.273e-34
Identity = 76/133 (57.14%), Postives = 94/133 (70.68%), Query Frame = -2
Query:  364 ISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRELILLVDTSLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTVVQMLMGE 762
            ISDFGLAKL     TH+STR+AGTIGY+APEYA+RG +T KAD+YSFGV+ +EIVSG+ NTN R   E  YLL+  + L E+  L+ LVD  L   F  +EA R L + LLCT  +P LRP MS+VV ML G+
Sbjct:  811 ISDFGLAKLNDDENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVCLEIVSGKSNTNYRPKEEFVYLLDWAYVLQEQGSLLELVDPDLGTSFSKKEAMRMLNIALLCTNPSPTLRPPMSSVVSMLEGK 943          
BLAST of CN185603 vs. ExPASy Swiss-Prot
Match: Y1765_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07650 OS=Arabidopsis thaliana GN=At1g07650 PE=1 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.662e-34
Identity = 77/134 (57.46%), Postives = 98/134 (73.13%), Query Frame = -2
Query:  364 ISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEE-QYLLERTWDLYERRELILLVDTSLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTVVQMLMGE 762
            ISDFGLAKL     TH+STR+AGTIGY+APEYA+RG +T KAD+YSFGV+ +EIVSG+ NTN R PTE+  YLL+  + L ER  L+ LVD +L  D+  EEA   L V L+CT  +P LRP+MS VV ++ G+
Sbjct:  821 ISDFGLAKLNDDGNTHISTRIAGTIGYMAPEYAMRGYLTEKADVYSFGVVALEIVSGKSNTNFR-PTEDFVYLLDWAYVLQERGSLLELVDPTLASDYSEEEAMLMLNVALMCTNASPTLRPTMSQVVSLIEGK 953          
BLAST of CN185603 vs. ExPASy Swiss-Prot
Match: Y1534_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53420 OS=Arabidopsis thaliana GN=At1g53420 PE=2 SV=2)

HSP 1 Score: 137.117 bits (344), Expect = 1.008e-31
Identity = 68/141 (48.23%), Postives = 96/141 (68.09%), Query Frame = -2
Query:  340 ISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRELILLVDTSLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTVVQMLMGEKDIDDDKI 762
            ISDFGLAKL   + TH+STR+AGT GY+APEYA+RG +T KAD+YSFG++ +EIV GR N   R      YL++    L E+  L+ LVD  L  +++ EEA   +++ ++CT   P  RPSMS VV+ML G+K ++ +K+
Sbjct:  766 ISDFGLAKLDEEDSTHISTRIAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVHGRSNKIERSKNNTFYLIDWVEVLREKNNLLELVDPRLGSEYNREEAMTMIQIAIMCTSSEPCERPSMSEVVKMLEGKKMVEVEKL 906          
BLAST of CN185603 vs. ExPASy Swiss-Prot
Match: CRK42_ARATH (Cysteine-rich receptor-like protein kinase 42 OS=Arabidopsis thaliana GN=CRK42 PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.456e-30
Identity = 72/149 (48.32%), Postives = 97/149 (65.10%), Query Frame = -2
Query:  331 ISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRELILLVDTSLNGDF-----DAEEACRFLKVGLLCTQDTPKLRPSMSTVVQMLMGEKDIDDDKITKP 762
            I+DFGLA+    + TH+ST +AGT+GY+APEY +RGQ+T KAD+YSFGVL++EI  G    N  +P E  +LL+R W+LY    L+  +D  L  +F        EAC+ L+VGLLCTQ +P LRPSM  V++ML  E+D      T P
Sbjct:  456 IADFGLARCFGLDKTHLSTGIAGTLGYMAPEYVVRGQLTEKADVYSFGVLVLEIACG-TRINAFVP-ETGHLLQRVWNLYTLNRLVEALDPCLKDEFLQVQGSEAEACKVLRVGLLCTQASPSLRPSMEEVIRMLT-ERDYPIPSPTSP 601          
BLAST of CN185603 vs. ExPASy Swiss-Prot
Match: CRK3_ARATH (Cysteine-rich receptor-like protein kinase 3 OS=Arabidopsis thaliana GN=CRK3 PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.610e-29
Identity = 62/136 (45.59%), Postives = 91/136 (66.91%), Query Frame = -2
Query:  355 ISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRELILLVDTSLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTVVQMLMGEKDI 762
            I+DFGLA+L P + TH+ST +AGT+GY+APEY +RG++T KAD+YSFGVL++E+++G+   N     +   +L+  W LY    +   VD  L  +F+  EA R L++GLLC Q     RP+MS VV+M+ G  +I
Sbjct:  464 IADFGLARLFPEDKTHISTAIAGTLGYMAPEYVVRGKLTEKADVYSFGVLMIEVITGK--RNNAFVQDAGSILQSVWSLYRTSNVEEAVDPILGDNFNKIEASRLLQIGLLCVQAAFDQRPAMSVVVKMMKGSLEI 597          
BLAST of CN185603 vs. ExPASy Swiss-Prot
Match: RKF1_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RFK1 OS=Arabidopsis thaliana GN=RKF1 PE=1 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 7.479e-27
Identity = 69/156 (44.23%), Postives = 98/156 (62.82%), Query Frame = -2
Query:  295 ISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRELILLVDTSLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTVVQMLMGEKDIDDDKITKPGLISDFMDLKVR 762
            ISDFGLA+L     TH+ST+VAGTIGY+APEYA+ G +T KAD+YSFGVL++EIV+G  N+N     +   LLE   +  E   L+ +VD  L  + D +EA   +KV L+C+  +P  RP MS VV ML G   + +   + PG+  +  D++ +
Sbjct:  823 ISDFGLARLDEEEKTHISTKVAGTIGYMAPEYALWGYLTFKADVYSFGVLVLEIVAGITNSNFMGAGDSVCLLEFANECVESGHLMQVVDERLRPEVDRKEAEAVIKVALVCSSASPTDRPLMSEVVAMLEGLYPVPE---STPGVSRNAGDIRFK 975          
BLAST of CN185603 vs. ExPASy Swiss-Prot
Match: CRK1_ARATH (Cysteine-rich receptor-like protein kinase 1 OS=Arabidopsis thaliana GN=CRK1 PE=2 SV=2)

HSP 1 Score: 119.783 bits (299), Expect = 1.666e-26
Identity = 60/133 (45.11%), Postives = 87/133 (65.41%), Query Frame = -2
Query:  364 ISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRELILLVDTSLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTVVQMLMGE 762
            I+DFGL + +  + T  +T +AGT+GYLAPEY I+GQ+T KAD+Y+FGVL++EIV+G+ N      T    +L   W+ ++   L   +D  L G F  EEA + L++GLLC Q + +LRPSMS +V ML  +
Sbjct:  459 IADFGLIRSMGTDKTQTNTGIAGTLGYLAPEYLIKGQLTEKADVYAFGVLIIEIVTGKKNNAFTQGTSS--VLYSVWEHFKANTLDRSIDPRLKGSFVEEEALKVLQIGLLCVQSSVELRPSMSEIVFMLQNK 589          
The following BLAST results are available for this feature:
BLAST of CN185603 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 194
Match NameE-valueIdentityDescription
Y1561_ARATH4.227e-3855.33Probable LRR receptor-like serine/threonine-protei... [more]
Y5614_ARATH2.319e-3651.33Probable LRR receptor-like serine/threonine-protei... [more]
Y5344_ARATH7.461e-3557.14Probable LRR receptor-like serine/threonine-protei... [more]
Y5343_ARATH1.273e-3457.14Probable LRR receptor-like serine/threonine-protei... [more]
Y1765_ARATH1.662e-3457.46Probable LRR receptor-like serine/threonine-protei... [more]
Y1534_ARATH1.008e-3148.23Probable LRR receptor-like serine/threonine-protei... [more]
CRK42_ARATH1.456e-3048.32Cysteine-rich receptor-like protein kinase 42 OS=A... [more]
CRK3_ARATH1.610e-2945.59Cysteine-rich receptor-like protein kinase 3 OS=Ar... [more]
RKF1_ARATH7.479e-2744.23Probable LRR receptor-like serine/threonine-protei... [more]
CRK1_ARATH1.666e-2645.11Cysteine-rich receptor-like protein kinase 1 OS=Ar... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001J13_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001J13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185603 ID=CN185603; Name=CN185603; organism=Citrus sinensis; type=EST; length=763bp
GAGGAAAACTTCTCCATTTACAAGAAAATACCCAGTAAGTTTTGAAATAC
CAAATGAATACAAGATTGCAAAATCTACAAGGGACAACAAAGCCTCAAAA
CCCTAAAATGAAGAAATAAATTACTATGATTTGCTTTTAAACCGAATTAA
TGTTCAAGTGCTCCTATCATATGATACTGTAAAGGTCATAGTAGCAGCAC
TCGTGGCTGCCGATGACAAATTTGAGTTGTCTGGATTGTCCGAGCTATTA
TAAGTTGATGAAGTCGTTGTTTCCAACTTAGGTTTAGGGGGACCTCTTAC
TTTGAGGTCCATGAAATCGGAAATTAATCCTGGCTTTGTTATTTTATCAT
CATCTATGTCTTTCTCACCCATCAGCATCTGGACCACAGTTGACATGGAT
GGCCGGAGCTTTGGAGTGTCTTGAGTGCAGAGAAGACCAACCTTTAGGAA
TCTACAAGCCTCCTCAGCATCAAAATCGCCATTCAATGATGTATCTACCA
GTAGTATCAACTCCCTTCGCTCATATAAATCCCATGTCCGTTCTAGAAGA
TATTGCTCTTCGGTGGGCAATCGCATATTTGTGTTACACCTCCCACTGAC
TATTTCCACAAGGAGTACACCAAAACTGTATATATCTGCTTTCCGTGTCA
CTTGCCCTCTTATTGCATACTCTGGTGCTAGATAACCTATTGTTCCAGCA
ACCCTAGTGCTAACATGAGTCATGTTGGCCGGGATAAGCTTTGCAAGACC
AAAATCTGAAATT
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