CN185573
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN185573 vs. ExPASy Swiss-Prot
Match: TTG1_ARATH (Protein TRANSPARENT TESTA GLABRA 1 OS=Arabidopsis thaliana GN=TTG1 PE=1 SV=1) HSP 1 Score: 328.561 bits (841), Expect = 1.769e-89 Identity = 160/222 (72.07%), Postives = 186/222 (83.78%), Query Frame = 1 Query: 7 RSENSVTHESPYPLYAMAVC------GQRIAVGSFIEDYTNRVDVNSFEPQSLSVRTHPSLSFDHPYPPTKLMFDPXXXXXXXXXXXHLLASSGDFLRLWDVGD--SSIEPVAVLNNSKSTEFCAPLTSFDWNEIEP*RIGTCSIDTTCTIWDIEKGVVETQLIAHDKEVYDICWGEARVFASVSADGSVRIFDLRDTEHSTIIYESPQPDTPLLRLAWNQQ 648 RSE +VT++SPYPLYAMA G RIAVGSF+EDY NR+D+ SF+ S++V+ P+LSF+HPYPPTKLMF P LLASSGDFLRLW++ + S++EP++VLNNSK++EFCAPLTSFDWN++EP R+GTCSIDTTCTIWDIEK VVETQLIAHDKEV+DI WGEARVFASVSADGSVRIFDLRD EHSTIIYESPQPDTPLLRLAWN+Q Sbjct: 11 RSETAVTYDSPYPLYAMAFSSLRSSSGHRIAVGSFLEDYNNRIDILSFDSDSMTVKPLPNLSFEHPYPPTKLMFSPPSLRRPSSGD--LLASSGDFLRLWEINEDSSTVEPISVLNNSKTSEFCAPLTSFDWNDVEPKRLGTCSIDTTCTIWDIEKSVVETQLIAHDKEVHDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQ 230
BLAST of CN185573 vs. ExPASy Swiss-Prot
Match: LWD1_ARATH (WD repeat-containing protein LWD1 OS=Arabidopsis thaliana GN=LWD1 PE=2 SV=1) HSP 1 Score: 248.44 bits (633), Expect = 2.327e-65 Identity = 124/215 (57.67%), Postives = 156/215 (72.56%), Query Frame = 1 Query: 25 THESPYPLYAMAVCGQR-----IAVGSFIEDYTNRVDVNSFEPQSLSVRTHPSLSFDHPYPPTKLMFDPXXXXXXXXXXXHLLASSGDFLRLWDVGD--SSIEPVAVLNNSKSTEFCAPLTSFDWNEIEP*RIGTCSIDTTCTIWDIEKGVVETQLIAHDKEVYDICWGEARVFASVSADGSVRIFDLRDTEHSTIIYESPQPDTPLLRLAWNQQ 648 T+E+P+ +YAM +R +A+ S +E Y NRV++ + + +R+ P+LSF+HPYPPTK +F P LLA+S DFLRLW + D S +E + LN++K++EFC PLTSFDWNE EP RIGT S DTTCTIWDIE+ V+TQLIAHDKEV+DI WG VFASVSADGSVR+FDLRD EHSTIIYES +PDTPL+RL WN+Q Sbjct: 23 TYEAPWHIYAMNWSVRRDKKYRLAITSLLEQYPNRVEIVQLDESNGEIRSDPNLSFEHPYPPTKTIFIPDKECQRPD----LLATSSDFLRLWRIADDHSRVELKSCLNSNKNSEFCGPLTSFDWNEAEPRRIGTSSTDTTCTIWDIEREAVDTQLIAHDKEVFDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQ 233
BLAST of CN185573 vs. ExPASy Swiss-Prot
Match: LWD2_ARATH (WD repeat-containing protein LWD2 OS=Arabidopsis thaliana GN=LWD2 PE=2 SV=1) HSP 1 Score: 240.35 bits (612), Expect = 6.336e-63 Identity = 122/215 (56.74%), Postives = 153/215 (71.16%), Query Frame = 1 Query: 25 THESPYPLYAMAVCGQR-----IAVGSFIEDYTNRVDVNSFEPQSLSVRTHPSLSFDHPYPPTKLMFDPXXXXXXXXXXXHLLASSGDFLRLWDVGD--SSIEPVAVLNNSKSTEFCAPLTSFDWNEIEP*RIGTCSIDTTCTIWDIEKGVVETQLIAHDKEVYDICWGEARVFASVSADGSVRIFDLRDTEHSTIIYESPQPDTPLLRLAWNQQ 648 T+E+P+ +YAM +R +A+ S IE Y NRV++ + + +R+ P+L F+HPYPPTK F P LLA+S DFLRLW + D S +E + L++ K++EF P+TSFDWNE EP RIGT SIDTTCTIWDIE+ VV+TQLIAHDKEVYDI WG VFASVS DGSVR+FDLRD EHSTIIYES +P TPL+RL+WN+Q Sbjct: 23 TYEAPWQIYAMNWSIRRDKKYRLAITSLIEQYPNRVEIVQLDESNGEIRSDPNLCFEHPYPPTKTSFIPDKECQRPD----LLATSSDFLRLWRISDDESRVELKSCLSSDKNSEFSGPITSFDWNEAEPRRIGTSSIDTTCTIWDIEREVVDTQLIAHDKEVYDIAWGGVGVFASVSEDGSVRVFDLRDKEHSTIIYESGEPSTPLVRLSWNKQ 233
BLAST of CN185573 vs. ExPASy Swiss-Prot
Match: DCAF7_MOUSE (DDB1- and CUL4-associated factor 7 OS=Mus musculus GN=Dcaf7 PE=2 SV=1) HSP 1 Score: 205.297 bits (521), Expect = 2.259e-52 Identity = 114/227 (50.22%), Postives = 148/227 (65.20%), Query Frame = 1 Query: 28 HESPYPLYAMAVCGQ-----RIAVGSFIEDYTNRVDVNSFEPQSLSVRTHPSLSFDHPYPPTKLMFDPXXXXXXXXXXXHLLASSGDFLRLWDVGDSSIEPVAVLNNSKSTEFCAPLTSFDWNEIEP*RIGTCSIDTTCTIWDIE-----------KGVVETQLIAHDKEVYDICWGEA----RVFASVSADGSVRIFDLRDTEHSTIIYESPQPDTPLLRLAWNQQ 648 +E+P+ +YAM + R+A+GSF+E+Y N+V + + +S + FDHPYP TKLM+ P LLA+SGD+LR+W VG++ +LNN+K+++FCAPLTSFDWNE++P +GT SIDTTCTIW +E G V+TQLIAHDKEVYDI + A +FASV ADGSVR+FDLR EHSTIIYE PQ PLLRL WN+Q Sbjct: 13 YEAPWTVYAMNWSVRPDKRFRLALGSFVEEYNNKVQLVGLDEESSEFICRNT--FDHPYPTTKLMWIPDTKGVYPD----LLATSGDYLRVWRVGETETRLECLLNNNKNSDFCAPLTSFDWNEVDPYLLGTSSIDTTCTIWGLETGQVLGRVNLVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGADGSVRMFDLRHLEHSTIIYEDPQ-HHPLLRLCWNKQ 232
BLAST of CN185573 vs. ExPASy Swiss-Prot
Match: DCAF7_HUMAN (DDB1- and CUL4-associated factor 7 OS=Homo sapiens GN=DCAF7 PE=1 SV=1) HSP 1 Score: 205.297 bits (521), Expect = 2.259e-52 Identity = 114/227 (50.22%), Postives = 148/227 (65.20%), Query Frame = 1 Query: 28 HESPYPLYAMAVCGQ-----RIAVGSFIEDYTNRVDVNSFEPQSLSVRTHPSLSFDHPYPPTKLMFDPXXXXXXXXXXXHLLASSGDFLRLWDVGDSSIEPVAVLNNSKSTEFCAPLTSFDWNEIEP*RIGTCSIDTTCTIWDIE-----------KGVVETQLIAHDKEVYDICWGEA----RVFASVSADGSVRIFDLRDTEHSTIIYESPQPDTPLLRLAWNQQ 648 +E+P+ +YAM + R+A+GSF+E+Y N+V + + +S + FDHPYP TKLM+ P LLA+SGD+LR+W VG++ +LNN+K+++FCAPLTSFDWNE++P +GT SIDTTCTIW +E G V+TQLIAHDKEVYDI + A +FASV ADGSVR+FDLR EHSTIIYE PQ PLLRL WN+Q Sbjct: 13 YEAPWTVYAMNWSVRPDKRFRLALGSFVEEYNNKVQLVGLDEESSEFICRNT--FDHPYPTTKLMWIPDTKGVYPD----LLATSGDYLRVWRVGETETRLECLLNNNKNSDFCAPLTSFDWNEVDPYLLGTSSIDTTCTIWGLETGQVLGRVNLVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGADGSVRMFDLRHLEHSTIIYEDPQ-HHPLLRLCWNKQ 232
BLAST of CN185573 vs. ExPASy Swiss-Prot
Match: DCAF7_DICDI (DDB1- and CUL4-associated factor 7 homolog OS=Dictyostelium discoideum GN=wdr68 PE=3 SV=2) HSP 1 Score: 202.601 bits (514), Expect = 1.464e-51 Identity = 112/216 (51.85%), Postives = 146/216 (67.59%), Query Frame = 1 Query: 25 THESPYPLYAMAVCGQ-----RIAVGSFIEDYTNRVDVNSFEPQSLSVRTHPSLSFDHPYPPTKLMFDPXXXXXXXXXXXHLLASSGDFLRLWDVGDS--SIEPVAVLNNSKSTEFCAPLTSFDWNEIEP*RIGTCSIDTTCTIWDIEKGVVETQLIAHDKEVYDICWGEAR-VFASVSADGSVRIFDLRDTEHSTIIYESPQPDTPLLRLAWNQQ 648 T+ SP+ +Y ++ + R+A+GSF+EDYTNRVDV ++ F+HPYPPTK M+ P LLA++GD+LRLW+VG + SI+ ++L N S EFCAPL+SFDWNE +P + T SIDTTCTIW+IE G +TQLIAHDKEV+DI + +FASV ADGS+R+FDLR+ EHSTIIYE+P PLLRL WN+Q Sbjct: 8 TYNSPWVIYGLSWSSRVNRPFRLAIGSFLEDYTNRVDVIQLNEETDQFEV--VCGFEHPYPPTKCMWIPDKNSNRPD----LLATTGDYLRLWEVGSNQRSIKLKSLLTNVIS-EFCAPLSSFDWNETDPSLLATSSIDTTCTIWNIETGQAKTQLIAHDKEVFDIAFARGTDLFASVGADGSLRMFDLRNLEHSTIIYETPS-FVPLLRLCWNKQ 215
BLAST of CN185573 vs. ExPASy Swiss-Prot
Match: YBE8_SCHPO (Uncharacterized WD repeat-containing protein C17D11.08 OS=Schizosaccharomyces pombe GN=SPBC17D11.08 PE=1 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.129e-27 Identity = 86/211 (40.76%), Postives = 107/211 (50.71%), Query Frame = 1 Query: 76 IAVGSFIEDYTNRVDVNSF--EPQSLSVRTHPSLSFDHPYPPTKLMFDPXXXXXXXXXXXHLLASSGDFLRLWDVG-----DSSIEPVAVLNNSKSTEFCAPLTSFDWNEIEP*RIGTCSIDTTCTIWDIEKGVVETQLIAHDKEVYDICW--GEARVFASVSADGSVRIFDLRDTEHSTIIYE---------------SPQPDTPLLRLA 636 IA+GS E+ N + + S + D YP TKL+++P LLAS+ LRLW DS + A L+ T APLTSFDW + +P I S+DTTCT+WDI +TQLIAHDKEVYD+ + VF SV ADGSVR+FDLR +HSTIIYE SP PLLRL+ Sbjct: 69 IAMGSLNEEPNNMIQLLKLITGDDGNSHLEKAQAATDLEYPVTKLLWNPSSVGSNTDS--QLLASTDQQLRLWKTDFEAGIDSPLLCQASLSTHVKTHNNAPLTSFDWCKTDPSYIVVSSLDTTCTVWDIVAQQSKTQLIAHDKEVYDVAFLKDSINVFVSVGADGSVRMFDLRSLDHSTIIYEGDSTFWKRNGDYTNASPPVSAPLLRLS 277
BLAST of CN185573 vs. ExPASy Swiss-Prot
Match: YP247_YEAST (WD repeat-containing protein YPL247C OS=Saccharomyces cerevisiae GN=YPL247C PE=1 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 7.087e-22 Identity = 74/221 (33.48%), Postives = 108/221 (48.87%), Query Frame = 1 Query: 28 HESPYPLYAMA-VCGQRIAVGSFIEDYTNRVDVNSFEPQSLSVRTHPSLSF------DHPYPPTKLMFDPXXXXXXXXXXXHLLASSGDFLRLWDVGDSSIEPVAVLNNS------------------KSTEFCAPLTSFDWNEIEP*RIGTCSIDTTCTIWDIEKG-VVETQLIAHDKEVYDICW--GEARVFASVSADGSVRIFDLRDTEHSTIIYESP 606 ++S YPL+ + + +GS+ ED N++ V + ++ LS+ D YP +K+ + P LA+ D LR+W V + +N S K P+TSFDWN ++ I + SIDTTC +WD++ V+TQLIAHD EV+D+ + ++FAS DGSVR+FDLR HSTIIYE P Sbjct: 125 YQSHYPLFGLDWSADDYVCLGSYKEDSRNKLQV---------LHSNDLLSWESVVDADVVYPVSKIQWVPSQLYPRK------LATCSDSLRIWSVSPEERQFQEQINLSLCKYNRQHPANPAAADDMKVIGTFPPITSFDWNTVDTNLIISSSIDTTCIVWDLQSSHYVKTQLIAHDSEVFDVRFLTKSTQLFASCGGDGSVRVFDLRSLAHSTIIYEPP 330 The following BLAST results are available for this feature:
BLAST of CN185573 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN185573 ID=CN185573; Name=CN185573; organism=Citrus sinensis; type=EST; length=649bpback to top |