CN185553
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN185553 vs. ExPASy Swiss-Prot
Match: IF4A8_TOBAC (Eukaryotic initiation factor 4A-8 OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 201.445 bits (511), Expect = 3.529e-51 Identity = 96/108 (88.89%), Postives = 105/108 (97.22%), Query Frame = 3 Query: 129 MAGLAPEGSQFDARQYDTQMNELLSTDGQDFFTSYDEVYDSFDAMGLRENLLRGIYAYGFEKPSAIQQRGIVPFCKGREVIQQAQSGTGKTATFCSGILQQLDYGLVQ 452 MA LAP+G+QFDARQYD++MN+LL+ DG+DFFTSYDEVYDSFDAMGL+ENLLRGIYAYGFEKPSAIQQRGIVPFCKG +VIQQAQSGTGKTATFCSGILQQLDYGLVQ Sbjct: 1 MARLAPDGAQFDARQYDSKMNDLLAADGKDFFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQ 108 HSP 2 Score: 148.288 bits (373), Expect = 3.577e-35 Identity = 75/91 (82.42%), Postives = 80/91 (87.91%), Query Frame = 1 Query: 421 FCSNLIMVLS----KCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVQVAVGTPGRVFDMLRRQSLRPDYIK 681 FCS ++ L +CQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRIL AGV V VGTPGRVFDMLRRQSLRPDY++ Sbjct: 94 FCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILAAGVHVIVGTPGRVFDMLRRQSLRPDYLR 184
BLAST of CN185553 vs. ExPASy Swiss-Prot
Match: IF415_TOBAC (Eukaryotic initiation factor 4A-15 OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 200.29 bits (508), Expect = 7.862e-51 Identity = 97/108 (89.81%), Postives = 103/108 (95.37%), Query Frame = 3 Query: 129 MAGLAPEGSQFDARQYDTQMNELLSTDGQDFFTSYDEVYDSFDAMGLRENLLRGIYAYGFEKPSAIQQRGIVPFCKGREVIQQAQSGTGKTATFCSGILQQLDYGLVQ 452 MAG APEGSQFDARQ+DT+MNELLS DGQDFFTSYDEVYDSFDAMGL+ENLLRGIYAYGFEKPSAIQQRGIVPFCKG +VIQQAQSGTGKTATFCSGILQQL Y L++ Sbjct: 1 MAGAAPEGSQFDARQFDTKMNELLSADGQDFFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLAYELLE 108 HSP 2 Score: 144.436 bits (363), Expect = 5.165e-34 Identity = 74/91 (81.32%), Postives = 80/91 (87.91%), Query Frame = 1 Query: 421 FCSNLIMVLS----KCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVQVAVGTPGRVFDMLRRQSLRPDYIK 681 FCS ++ L+ +CQALVLAPTRELAQQIEKVMRALGDYLGVKV ACVGGTSVREDQRIL +GV V VGTPGRVFDMLRRQSLRPD+IK Sbjct: 94 FCSGILQQLAYELLECQALVLAPTRELAQQIEKVMRALGDYLGVKVTACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRRQSLRPDHIK 184
BLAST of CN185553 vs. ExPASy Swiss-Prot
Match: IF4A7_TOBAC (Eukaryotic initiation factor 4A-7 OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 197.208 bits (500), Expect = 6.656e-50 Identity = 94/108 (87.04%), Postives = 102/108 (94.44%), Query Frame = 3 Query: 129 MAGLAPEGSQFDARQYDTQMNELLSTDGQDFFTSYDEVYDSFDAMGLRENLLRGIYAYGFEKPSAIQQRGIVPFCKGREVIQQAQSGTGKTATFCSGILQQLDYGLVQ 452 MAGLAPEGSQFDARQYD +M ELL T+ ++FFTSYDEVYDSFDAMGL+ENLLRGIYAYGFEKPSAIQQRGIVPFCKG +VIQQAQSGTGKTATFCSG+LQQLDY LV+ Sbjct: 1 MAGLAPEGSQFDARQYDAKMTELLGTEQEEFFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYSLVE 108 HSP 2 Score: 149.443 bits (376), Expect = 1.606e-35 Identity = 76/91 (83.52%), Postives = 81/91 (89.01%), Query Frame = 1 Query: 421 FCSNLIMVLS----KCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVQVAVGTPGRVFDMLRRQSLRPDYIK 681 FCS ++ L +CQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQ+GV V VGTPGRVFDMLRRQSLRPD+IK Sbjct: 94 FCSGVLQQLDYSLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQSGVHVVVGTPGRVFDMLRRQSLRPDHIK 184
BLAST of CN185553 vs. ExPASy Swiss-Prot
Match: IF414_TOBAC (Eukaryotic initiation factor 4A-14 OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 197.208 bits (500), Expect = 6.656e-50 Identity = 94/108 (87.04%), Postives = 102/108 (94.44%), Query Frame = 3 Query: 129 MAGLAPEGSQFDARQYDTQMNELLSTDGQDFFTSYDEVYDSFDAMGLRENLLRGIYAYGFEKPSAIQQRGIVPFCKGREVIQQAQSGTGKTATFCSGILQQLDYGLVQ 452 MAGLAPEGSQFDARQYD +M ELL T+ ++FFTSYDEVYDSFDAMGL+ENLLRGIYAYGFEKPSAIQQRGIVPFCKG +VIQQAQSGTGKTATFCSG+LQQLDY LV+ Sbjct: 1 MAGLAPEGSQFDARQYDAKMTELLGTEQEEFFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYSLVE 108 HSP 2 Score: 149.443 bits (376), Expect = 1.606e-35 Identity = 76/91 (83.52%), Postives = 81/91 (89.01%), Query Frame = 1 Query: 421 FCSNLIMVLS----KCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVQVAVGTPGRVFDMLRRQSLRPDYIK 681 FCS ++ L +CQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQ+GV V VGTPGRVFDMLRRQSLRPD+IK Sbjct: 94 FCSGVLQQLDYSLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQSGVHVVVGTPGRVFDMLRRQSLRPDHIK 184
BLAST of CN185553 vs. ExPASy Swiss-Prot
Match: IF413_TOBAC (Eukaryotic initiation factor 4A-13 (Fragment) OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 197.208 bits (500), Expect = 6.656e-50 Identity = 94/108 (87.04%), Postives = 102/108 (94.44%), Query Frame = 3 Query: 129 MAGLAPEGSQFDARQYDTQMNELLSTDGQDFFTSYDEVYDSFDAMGLRENLLRGIYAYGFEKPSAIQQRGIVPFCKGREVIQQAQSGTGKTATFCSGILQQLDYGLVQ 452 MAGLAPEGSQFDARQYD +M ELL T+ ++FFTSYDEVYDSFDAMGL+ENLLRGIYAYGFEKPSAIQQRGIVPFCKG +VIQQAQSGTGKTATFCSG+LQQLDY LV+ Sbjct: 1 MAGLAPEGSQFDARQYDAKMTELLGTEQEEFFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYSLVE 108 HSP 2 Score: 149.443 bits (376), Expect = 1.606e-35 Identity = 76/91 (83.52%), Postives = 81/91 (89.01%), Query Frame = 1 Query: 421 FCSNLIMVLS----KCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVQVAVGTPGRVFDMLRRQSLRPDYIK 681 FCS ++ L +CQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQ+GV V VGTPGRVFDMLRRQSLRPD+IK Sbjct: 94 FCSGVLQQLDYSLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQSGVHVVVGTPGRVFDMLRRQSLRPDHIK 184
BLAST of CN185553 vs. ExPASy Swiss-Prot
Match: IF411_TOBAC (Eukaryotic initiation factor 4A-11 OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 197.208 bits (500), Expect = 6.656e-50 Identity = 95/108 (87.96%), Postives = 102/108 (94.44%), Query Frame = 3 Query: 129 MAGLAPEGSQFDARQYDTQMNELLSTDGQDFFTSYDEVYDSFDAMGLRENLLRGIYAYGFEKPSAIQQRGIVPFCKGREVIQQAQSGTGKTATFCSGILQQLDYGLVQ 452 MAGLAPEGSQFDARQYD +M ELL T+ Q+FFTSYDEVY+SFDAMGL+ENLLRGIYAYGFEKPSAIQQRGIVPFCKG +VIQQAQSGTGKTATFCSGILQQLDY LV+ Sbjct: 1 MAGLAPEGSQFDARQYDAKMTELLGTEQQEFFTSYDEVYESFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYSLVE 108 HSP 2 Score: 148.288 bits (373), Expect = 3.577e-35 Identity = 76/91 (83.52%), Postives = 80/91 (87.91%), Query Frame = 1 Query: 421 FCSNLIMVLS----KCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVQVAVGTPGRVFDMLRRQSLRPDYIK 681 FCS ++ L +CQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQ+GV V VGTPGRVFDMLRRQSLRPD IK Sbjct: 94 FCSGILQQLDYSLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQSGVHVVVGTPGRVFDMLRRQSLRPDNIK 184
BLAST of CN185553 vs. ExPASy Swiss-Prot
Match: IF410_TOBAC (Eukaryotic initiation factor 4A-10 OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 197.208 bits (500), Expect = 6.656e-50 Identity = 94/108 (87.04%), Postives = 102/108 (94.44%), Query Frame = 3 Query: 129 MAGLAPEGSQFDARQYDTQMNELLSTDGQDFFTSYDEVYDSFDAMGLRENLLRGIYAYGFEKPSAIQQRGIVPFCKGREVIQQAQSGTGKTATFCSGILQQLDYGLVQ 452 MAGLAPEGSQFDARQYD +M ELL T+ ++FFTSYDEVYDSFDAMGL+ENLLRGIYAYGFEKPSAIQQRGIVPFCKG +VIQQAQSGTGKTATFCSG+LQQLDY LV+ Sbjct: 1 MAGLAPEGSQFDARQYDAKMTELLGTEQEEFFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYSLVE 108 HSP 2 Score: 149.443 bits (376), Expect = 1.606e-35 Identity = 76/91 (83.52%), Postives = 81/91 (89.01%), Query Frame = 1 Query: 421 FCSNLIMVLS----KCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVQVAVGTPGRVFDMLRRQSLRPDYIK 681 FCS ++ L +CQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQ+GV V VGTPGRVFDMLRRQSLRPD+IK Sbjct: 94 FCSGVLQQLDYSLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQSGVHVVVGTPGRVFDMLRRQSLRPDHIK 184
BLAST of CN185553 vs. ExPASy Swiss-Prot
Match: IF4A9_TOBAC (Eukaryotic initiation factor 4A-9 OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 2.529e-49 Identity = 94/107 (87.85%), Postives = 101/107 (94.39%), Query Frame = 3 Query: 129 MAGLAPEGSQFDARQYDTQMNELLSTDGQDFFTSYDEVYDSFDAMGLRENLLRGIYAYGFEKPSAIQQRGIVPFCKGREVIQQAQSGTGKTATFCSGILQQLDYGLV 449 MAG APEGSQFDARQYD++M ELL+ +GQDFFTSYDEVY SFDAMGL+ENLLRGIYAYGFEKPSAIQQRGIVPFCKG +VIQQAQSGTGKTATFCSGILQQLDY L+ Sbjct: 1 MAGAAPEGSQFDARQYDSKMTELLNAEGQDFFTSYDEVYHSFDAMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYELL 107 HSP 2 Score: 147.132 bits (370), Expect = 7.968e-35 Identity = 75/91 (82.42%), Postives = 79/91 (86.81%), Query Frame = 1 Query: 421 FCSNLIMVLS----KCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVQVAVGTPGRVFDMLRRQSLRPDYIK 681 FCS ++ L CQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRIL +GV V VGTPGRVFDMLRRQSLRPD+IK Sbjct: 94 FCSGILQQLDYELLDCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRRQSLRPDHIK 184
BLAST of CN185553 vs. ExPASy Swiss-Prot
Match: IF4A2_NICPL (Eukaryotic initiation factor 4A-2 OS=Nicotiana plumbaginifolia PE=2 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 9.611e-49 Identity = 92/108 (85.19%), Postives = 101/108 (93.52%), Query Frame = 3 Query: 129 MAGLAPEGSQFDARQYDTQMNELLSTDGQDFFTSYDEVYDSFDAMGLRENLLRGIYAYGFEKPSAIQQRGIVPFCKGREVIQQAQSGTGKTATFCSGILQQLDYGLVQ 452 MAG APEGSQFDARQ+D +M ELL T+ ++FFTSYDEVYDSFDAMGL+ENLLRGIYAYGFEKPSAIQQRGIVPFCKG +VIQQAQSGTGKTATFCSG+LQQLDY LV+ Sbjct: 1 MAGSAPEGSQFDARQFDAKMTELLGTEQEEFFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYSLVE 108 HSP 2 Score: 149.443 bits (376), Expect = 1.606e-35 Identity = 76/91 (83.52%), Postives = 81/91 (89.01%), Query Frame = 1 Query: 421 FCSNLIMVLS----KCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVQVAVGTPGRVFDMLRRQSLRPDYIK 681 FCS ++ L +CQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQ+GV V VGTPGRVFDMLRRQSLRPD+IK Sbjct: 94 FCSGVLQQLDYSLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQSGVHVVVGTPGRVFDMLRRQSLRPDHIK 184
BLAST of CN185553 vs. ExPASy Swiss-Prot
Match: IF4A3_ORYSJ (Eukaryotic initiation factor 4A-3 OS=Oryza sativa subsp. japonica GN=Os02g0146600 PE=2 SV=1) HSP 1 Score: 186.037 bits (471), Expect = 1.534e-46 Identity = 90/109 (82.57%), Postives = 101/109 (92.66%), Query Frame = 3 Query: 129 MAGLAPEGSQFDARQYDTQMNELLST-DGQDFFTSYDEVYDSFDAMGLRENLLRGIYAYGFEKPSAIQQRGIVPFCKGREVIQQAQSGTGKTATFCSGILQQLDYGLVQ 452 MAG+APEGSQFDA+ YD++M ELL D ++FFTSYDEV++SFD MGL+ENLLRGIYAYGFEKPSAIQQRGIVPFCKG +VIQQAQSGTGKTATFCSGILQQLDYGLV+ Sbjct: 1 MAGMAPEGSQFDAKHYDSKMQELLHQGDNEEFFTSYDEVFESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVE 109 HSP 2 Score: 146.362 bits (368), Expect = 1.359e-34 Identity = 74/91 (81.32%), Postives = 80/91 (87.91%), Query Frame = 1 Query: 421 FCSNLIMVLS----KCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVQVAVGTPGRVFDMLRRQSLRPDYIK 681 FCS ++ L +CQ+LVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRIL +GV V VGTPGRVFDMLRRQSLRPD+IK Sbjct: 95 FCSGILQQLDYGLVECQSLVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILASGVHVVVGTPGRVFDMLRRQSLRPDHIK 185 The following BLAST results are available for this feature:
BLAST of CN185553 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 478
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN185553 ID=CN185553; Name=CN185553; organism=Citrus sinensis; type=EST; length=682bpback to top |