CN185460
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN185460 vs. ExPASy Swiss-Prot
Match: RN167_RAT (E3 ubiquitin-protein ligase RNF167 OS=Rattus norvegicus GN=Rnf167 PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.506e-14 Identity = 33/76 (43.42%), Postives = 45/76 (59.21%), Query Frame = -1 Query: 168 PIKSHKKGDKAEGGVEPDQCYICLAEYEEGDRIRLLPCHHEYHMSCVDKWLKEIHGVCPLCRRDVRQGATESSNSE 395 P ++KGD E D C ICL EYE+GD++R+LPC H YH CVD WL + CP+C++ V +G + E Sbjct: 217 PTHDYQKGD------EYDVCAICLDEYEDGDKLRILPCAHAYHSRCVDPWLTQTRKTCPICKQPVHRGPGDEEQEE 286
BLAST of CN185460 vs. ExPASy Swiss-Prot
Match: RN167_MOUSE (E3 ubiquitin-protein ligase RNF167 OS=Mus musculus GN=Rnf167 PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 5.885e-14 Identity = 33/76 (43.42%), Postives = 45/76 (59.21%), Query Frame = -1 Query: 168 PIKSHKKGDKAEGGVEPDQCYICLAEYEEGDRIRLLPCHHEYHMSCVDKWLKEIHGVCPLCRRDVRQGATESSNSE 395 P ++KGD E D C ICL EYE+GD++R+LPC H YH CVD WL + CP+C++ V +G + E Sbjct: 217 PTHDYQKGD------EYDVCAICLDEYEDGDKLRVLPCAHAYHSRCVDPWLTQTRKTCPICKQPVHRGPGDEEQEE 286
BLAST of CN185460 vs. ExPASy Swiss-Prot
Match: RNF13_RAT (RING finger protein 13 OS=Rattus norvegicus GN=Rnf13 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.311e-13 Identity = 35/74 (47.30%), Postives = 46/74 (62.16%), Query Frame = -1 Query: 180 PIKSHKKGDKAEGGVEPDQCYICLAEYEEGDRIRLLPCHHEYHMSCVDKWLKEIHGVCPLCRRDV--RQGATES 395 P+ KKGD E D C ICL EYE+GD++R+LPC H YH CVD WL + CP+C++ V QG ++S Sbjct: 227 PVHKFKKGD------EYDVCAICLEEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKVVPSQGDSDS 294
BLAST of CN185460 vs. ExPASy Swiss-Prot
Match: RNF13_MOUSE (RING finger protein 13 OS=Mus musculus GN=Rnf13 PE=1 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.311e-13 Identity = 35/74 (47.30%), Postives = 46/74 (62.16%), Query Frame = -1 Query: 180 PIKSHKKGDKAEGGVEPDQCYICLAEYEEGDRIRLLPCHHEYHMSCVDKWLKEIHGVCPLCRRDV--RQGATES 395 P+ KKGD E D C ICL EYE+GD++R+LPC H YH CVD WL + CP+C++ V QG ++S Sbjct: 227 PVHKFKKGD------EYDVCAICLEEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKVVPSQGDSDS 294
BLAST of CN185460 vs. ExPASy Swiss-Prot
Match: RN167_HUMAN (E3 ubiquitin-protein ligase RNF167 OS=Homo sapiens GN=RNF167 PE=1 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.311e-13 Identity = 32/76 (42.11%), Postives = 45/76 (59.21%), Query Frame = -1 Query: 168 PIKSHKKGDKAEGGVEPDQCYICLAEYEEGDRIRLLPCHHEYHMSCVDKWLKEIHGVCPLCRRDVRQGATESSNSE 395 P ++KGD+ D C ICL EYE+GD++R+LPC H YH CVD WL + CP+C++ V +G + E Sbjct: 217 PTHDYQKGDQY------DVCAICLDEYEDGDKLRVLPCAHAYHSRCVDPWLTQTRKTCPICKQPVHRGPGDEDQEE 286
BLAST of CN185460 vs. ExPASy Swiss-Prot
Match: RNF13_PONAB (RING finger protein 13 OS=Pongo abelii GN=RNF13 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.712e-13 Identity = 35/74 (47.30%), Postives = 46/74 (62.16%), Query Frame = -1 Query: 180 PIKSHKKGDKAEGGVEPDQCYICLAEYEEGDRIRLLPCHHEYHMSCVDKWLKEIHGVCPLCRRDV--RQGATES 395 P+ KKGD E D C ICL EYE+GD++R+LPC H YH CVD WL + CP+C++ V QG ++S Sbjct: 227 PVHKFKKGD------EYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKVVPSQGDSDS 294
BLAST of CN185460 vs. ExPASy Swiss-Prot
Match: RNF13_HUMAN (RING finger protein 13 OS=Homo sapiens GN=RNF13 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.712e-13 Identity = 35/74 (47.30%), Postives = 46/74 (62.16%), Query Frame = -1 Query: 180 PIKSHKKGDKAEGGVEPDQCYICLAEYEEGDRIRLLPCHHEYHMSCVDKWLKEIHGVCPLCRRDV--RQGATES 395 P+ KKGD E D C ICL EYE+GD++R+LPC H YH CVD WL + CP+C++ V QG ++S Sbjct: 227 PVHKFKKGD------EYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKVVPSQGDSDS 294
BLAST of CN185460 vs. ExPASy Swiss-Prot
Match: RNF13_CHICK (RING finger protein 13 OS=Gallus gallus GN=RNF13 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.712e-13 Identity = 35/74 (47.30%), Postives = 46/74 (62.16%), Query Frame = -1 Query: 180 PIKSHKKGDKAEGGVEPDQCYICLAEYEEGDRIRLLPCHHEYHMSCVDKWLKEIHGVCPLCRRDV--RQGATES 395 P+ KKGD E D C ICL EYE+GD++R+LPC H YH CVD WL + CP+C++ V QG ++S Sbjct: 227 PVHKFKKGD------EYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKVVPSQGDSDS 294
BLAST of CN185460 vs. ExPASy Swiss-Prot
Match: RNF13_BOVIN (RING finger protein 13 OS=Bos taurus GN=RNF13 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.712e-13 Identity = 35/74 (47.30%), Postives = 46/74 (62.16%), Query Frame = -1 Query: 180 PIKSHKKGDKAEGGVEPDQCYICLAEYEEGDRIRLLPCHHEYHMSCVDKWLKEIHGVCPLCRRDV--RQGATES 395 P+ KKGD E D C ICL EYE+GD++R+LPC H YH CVD WL + CP+C++ V QG ++S Sbjct: 227 PVHKFKKGD------EYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKVVPSQGDSDS 294
BLAST of CN185460 vs. ExPASy Swiss-Prot
Match: ATL5G_ARATH (Probable RING-H2 finger protein ATL5G OS=Arabidopsis thaliana GN=ATL5G PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.217e-12 Identity = 32/70 (45.71%), Postives = 46/70 (65.71%), Query Frame = -1 Query: 210 ESVVDSFPIKSHKKGDKAEGGVEPDQCYICLAEYEEGDRIRLLP-CHHEYHMSCVDKWLKEIHGVCPLCR 416 ES++ S + +K GD G V+ C +CL+E+EE + +RLLP C+H +H+ C+D WLK H CPLCR Sbjct: 119 ESMIKSITVYKYKSGD---GFVDGSDCSVCLSEFEENESLRLLPKCNHAFHLPCIDTWLKS-HSNCPLCR 184 The following BLAST results are available for this feature:
BLAST of CN185460 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 21
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185460 ID=CN185460; Name=CN185460; organism=Citrus sinensis; type=EST; length=680bpback to top |