CN185373
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185373 vs. ExPASy Swiss-Prot
Match: LBD12_ARATH (LOB domain-containing protein 12 OS=Arabidopsis thaliana GN=LBD12 PE=2 SV=2) HSP 1 Score: 216.083 bits (549), Expect = 1.157e-55 Identity = 111/150 (74.00%), Postives = 121/150 (80.67%), Query Frame = 3 Query: 84 GNSPCASCKLLRRRCTKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAVSSLVYEANARVRDPVYGCVGAISFLQNQVSQLQMQLAVAEAEILCI----XXXXXXXXXXXXIDPDDKPFLLQNNLPHQYLNFTSSSNN 521 G+SPCASCKLLRRRC KDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAV+SLV+EANARVRDPVYGCVGAIS+LQNQVSQLQMQLAVA+AEILCI +D D K LL NN +N +++NN Sbjct: 5 GSSPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAVNSLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQNEPTLQSHHQVLELDQDHKALLLNNN----NINNCNTNNN 150
BLAST of CN185373 vs. ExPASy Swiss-Prot
Match: LBD4_ARATH (LOB domain-containing protein 4 OS=Arabidopsis thaliana GN=LBD4 PE=2 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 7.033e-45 Identity = 83/111 (74.77%), Postives = 97/111 (87.39%), Query Frame = 3 Query: 66 SQRKMGGNSPCASCKLLRRRCTKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAVSSLVYEANARVRDPVYGCVGAISFLQNQVSQLQMQLAVAEAEIL 398 S RK G SPCA+CKLLRRRC +DC+F+PYFP D+P KFA VH+VFGASNV+KMLQELP+HQR DAVSS+VYEANARVRDPVYGCVGAIS LQ Q+ LQ QLA+A+AE++ Sbjct: 4 SSRKQGAASPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQELPIHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVV 114
BLAST of CN185373 vs. ExPASy Swiss-Prot
Match: LOB_ARATH (Protein LATERAL ORGAN BOUNDARIES OS=Arabidopsis thaliana GN=LOB PE=2 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 1.678e-38 Identity = 73/103 (70.87%), Postives = 86/103 (83.50%), Query Frame = 3 Query: 87 NSPCASCKLLRRRCTKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAVSSLVYEANARVRDPVYGCVGAISFLQNQVSQLQMQLAVAEAEI 395 NSPCA+CK LRR+C CIFAPYFPP++PHKFA VHK+FGASNV+K+L EL HQR DAV+SL YEA ARVRDPVYGCVGAIS+LQ QV +LQ +L A A++ Sbjct: 9 NSPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELLPHQREDAVNSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADL 111
BLAST of CN185373 vs. ExPASy Swiss-Prot
Match: LBD3_ARATH (LOB domain-containing protein 3 OS=Arabidopsis thaliana GN=LBD3 PE=2 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 4.133e-37 Identity = 73/106 (68.87%), Postives = 88/106 (83.02%), Query Frame = 3 Query: 90 SPCASCKLLRRRCTKD-CIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAVSSLVYEANARVRDPVYGCVGAISFLQNQVSQLQMQLAVAEAEILCI 404 SPCA CKLLRR+C KD C+FAPYFP +P+KFAIVHK+FGASNV+KMLQEL + R+DAV S+VYEANAR++DPVYGCVG IS L Q+ LQ QLA A+AE++ I Sbjct: 13 SPCAGCKLLRRKCVKDSCVFAPYFPAKEPYKFAIVHKIFGASNVNKMLQELSENHRSDAVDSMVYEANARIQDPVYGCVGTISSLHRQLETLQTQLAFAQAELIHI 118
BLAST of CN185373 vs. ExPASy Swiss-Prot
Match: LBD15_ARATH (LOB domain-containing protein 15 OS=Arabidopsis thaliana GN=LBD15 PE=2 SV=2) HSP 1 Score: 154.451 bits (389), Expect = 4.133e-37 Identity = 72/103 (69.90%), Postives = 84/103 (81.55%), Query Frame = 3 Query: 90 SPCASCKLLRRRCTKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAVSSLVYEANARVRDPVYGCVGAISFLQNQVSQLQMQLAVAEAEIL 398 +PCA+CKLLRRRC ++C F+PYF P +PHKFA VHKVFGASNVSKML E+P QRADA +SLVYEAN R+RDPVYGC+GAIS LQ QV LQ +L +EIL Sbjct: 44 TPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEVPESQRADAANSLVYEANVRLRDPVYGCMGAISALQQQVQALQAELTAVRSEIL 146
BLAST of CN185373 vs. ExPASy Swiss-Prot
Match: LBD25_ARATH (LOB domain-containing protein 25 OS=Arabidopsis thaliana GN=LBD25 PE=2 SV=3) HSP 1 Score: 154.066 bits (388), Expect = 5.397e-37 Identity = 69/104 (66.35%), Postives = 86/104 (82.69%), Query Frame = 3 Query: 87 NSPCASCKLLRRRCTKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAVSSLVYEANARVRDPVYGCVGAISFLQNQVSQLQMQLAVAEAEIL 398 NSPCA+CK LRR+CT DC+FAPYFPP++P KFA VH++FGASNVSK+L E+ HQR DAV+SL YEA AR++DPVYGCVGAIS LQ QV +LQ +L A+++ Sbjct: 37 NSPCAACKFLRRKCTSDCVFAPYFPPEEPTKFANVHRIFGASNVSKILHEVAPHQREDAVNSLAYEAEARLKDPVYGCVGAISVLQRQVLRLQRELEETNADLM 140
BLAST of CN185373 vs. ExPASy Swiss-Prot
Match: LBD1_ARATH (LOB domain-containing protein 1 OS=Arabidopsis thaliana GN=LBD1 PE=2 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.202e-36 Identity = 70/103 (67.96%), Postives = 83/103 (80.58%), Query Frame = 3 Query: 90 SPCASCKLLRRRCTKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAVSSLVYEANARVRDPVYGCVGAISFLQNQVSQLQMQLAVAEAEIL 398 SPCA+CK+LRRRC + C+ APYFPP DP KF I H+VFGASN+ K LQELP QR DAV+S+VYEA AR+RDPVYGC GAI LQ QVS+LQ QLA A+ E++ Sbjct: 32 SPCAACKILRRRCAERCVLAPYFPPTDPAKFTIAHRVFGASNIIKFLQELPESQRTDAVNSMVYEAEARIRDPVYGCAGAIYHLQRQVSELQAQLAKAQVEMV 134
BLAST of CN185373 vs. ExPASy Swiss-Prot
Match: LBD6_ARATH (LOB domain-containing protein 6 OS=Arabidopsis thaliana GN=LBD6 PE=1 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 3.499e-36 Identity = 69/103 (66.99%), Postives = 85/103 (82.52%), Query Frame = 3 Query: 87 NSPCASCKLLRRRCTKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAVSSLVYEANARVRDPVYGCVGAISFLQNQVSQLQMQLAVAEAEI 395 NSPCA+CK LRR+C +C+FAPYFPPD P KFA VHKVFGASNV+K+L EL QR DAV+SL YEA+ R+RDPVYGCVG IS LQ+Q+ QLQ+ L+ A++E+ Sbjct: 7 NSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPSQREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSEL 109
BLAST of CN185373 vs. ExPASy Swiss-Prot
Match: LBD11_ARATH (LOB domain-containing protein 11 OS=Arabidopsis thaliana GN=LBD11 PE=2 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 5.968e-36 Identity = 69/103 (66.99%), Postives = 81/103 (78.64%), Query Frame = 3 Query: 90 SPCASCKLLRRRCTKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAVSSLVYEANARVRDPVYGCVGAISFLQNQVSQLQMQLAVAEAEIL 398 SPCA+CK+LRRRC C+ APYFPP DP KF I H+VFGASN+ K LQELP QR DAV+S+VYEA AR+RDPVYGC GAI LQ QVS+LQ QLA + E++ Sbjct: 51 SPCAACKILRRRCADKCVLAPYFPPTDPAKFTIAHRVFGASNIIKFLQELPESQRTDAVNSMVYEAGARMRDPVYGCAGAIYHLQRQVSELQAQLAKTQVELV 153
BLAST of CN185373 vs. ExPASy Swiss-Prot
Match: LBD6_MAIZE (LOB domain-containing protein 6 OS=Zea mays GN=LBD6 PE=1 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 2.962e-35 Identity = 77/163 (47.24%), Postives = 100/163 (61.35%), Query Frame = 3 Query: 81 GGNSPCASCKLLRRRCTKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAVSSLVYEANARVRDPVYGCVGAISFLQNQVSQLQMQLAVAEAEILCIXXXXXXXXXXXXIDPDDKPFLLQNNLPHQYLNFTSSSNNVIHDSL-KRETIFGHD 566 G SPCA+CK LRR+C DC+FAPYFPPD+P KF VH+VFGASNV+K+L EL QR DAV+SL YEA+ R+RDPVYGCVG IS LQ+ + QLQ LA A+ E+ P + N +P+ NF + ++ SL ++FG + Sbjct: 29 GTGSPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLNELHPFQREDAVNSLAYEADMRLRDPVYGCVGVISILQHNLRQLQQDLARAKYELSKYQAAAAASASTAPTGPQAMAEFIGNAMPNGAHNFINIGHSAALGSLGGSASVFGQE 191 The following BLAST results are available for this feature:
BLAST of CN185373 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 37
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185373 ID=CN185373; Name=CN185373; organism=Citrus sinensis; type=EST; length=621bpback to top |