CN185231
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN185231 vs. ExPASy Swiss-Prot
Match: PRP31_XENLA (U4/U6 small nuclear ribonucleoprotein Prp31 OS=Xenopus laevis GN=prpf31 PE=2 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 3.804e-41 Identity = 96/212 (45.28%), Postives = 129/212 (60.85%), Query Frame = 3 Query: 6 NVSKLHKCHRFTVIMQKVEAALQNGPYISNHGMVLEDDPEYQLIVDCNVPXXXXXXXXXXXHNFIRDKYRLKFPELESLVHHPIDYARVVKKIGNEMDLTL--VDLEGLLPSAIIMVVSVTASTTSGKPLPEDVFQRTIXXXXXXXXXXXXXXXXXXFVESRMSYIAPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKKKNLAG 635 +++KL F+ I+ K+E +Q P S +E PEY++IVD N H FIRDKY +FPELESLV + +DY R VK++GN +D +L+ +L +A IMVVSVTASTT G+ L ++ +R +VESRMS+IAPNLS IVG++ AAK+MG AGGL+ L+KMPACNV LLGA++K L G Sbjct: 49 SIAKLSDSKLFSEILLKIEGYIQKQPKASEVMGPVEAAPEYKVIVDANNLTVEIENELNIIHKFIRDKYSKRFPELESLVPNALDYIRTVKELGNNLDKCKNNENLQQILTNATIMVVSVTASTTQGQQLTDEELERIEEACDMALELNQSKHRIYEYVESRMSFIAPNLSIIVGASTAAKIMGIAGGLTNLSKMPACNVMLLGAQRKTLTG 260
BLAST of CN185231 vs. ExPASy Swiss-Prot
Match: PRP31_XENTR (U4/U6 small nuclear ribonucleoprotein Prp31 OS=Xenopus tropicalis GN=prpf31 PE=2 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 1.888e-40 Identity = 94/212 (44.34%), Postives = 130/212 (61.32%), Query Frame = 3 Query: 6 NVSKLHKCHRFTVIMQKVEAALQNGPYISNHGMVLEDDPEYQLIVDCNVPXXXXXXXXXXXHNFIRDKYRLKFPELESLVHHPIDYARVVKKIGNEMDLTL--VDLEGLLPSAIIMVVSVTASTTSGKPLPEDVFQRTIXXXXXXXXXXXXXXXXXXFVESRMSYIAPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKKKNLAG 635 +++KL F+ I+ K++ ++ P S +E PEY++IVD N H FIRDKY +FPELESLV + +DY R VK++GN +D +L+ +L +A IMVVSVTASTT G+ L ++ +R +VESRMS+IAPNLS IVG++ AAK+MG AGGL+ L+KMPACNV LLGA++K L+G Sbjct: 49 SIAKLSDSKLFSEILLKIDGYIKKQPKASEVMGPVEAAPEYKVIVDANNLTVEIENELNIIHKFIRDKYSKRFPELESLVPNALDYIRTVKELGNNLDKCKNNENLQQILTNATIMVVSVTASTTQGQQLTDEELERIEEACDMALELNQSKHRIYEYVESRMSFIAPNLSIIVGASTAAKIMGIAGGLTNLSKMPACNVMLLGAQRKTLSG 260
BLAST of CN185231 vs. ExPASy Swiss-Prot
Match: PRP31_HUMAN (U4/U6 small nuclear ribonucleoprotein Prp31 OS=Homo sapiens GN=PRPF31 PE=1 SV=2) HSP 1 Score: 164.851 bits (416), Expect = 3.220e-40 Identity = 94/211 (44.55%), Postives = 126/211 (59.72%), Query Frame = 3 Query: 9 VSKLHKCHRFTVIMQKVEAALQNGPYISNHGMVLEDDPEYQLIVDCNVPXXXXXXXXXXXHNFIRDKYRLKFPELESLVHHPIDYARVVKKIGNEMDLTL--VDLEGLLPSAIIMVVSVTASTTSGKPLPEDVFQRTIXXXXXXXXXXXXXXXXXXFVESRMSYIAPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKKKNLAG 635 ++KL F IM K+E + S +E PEY++IVD N H FIRDKY +FPELESLV + +DY R VK++GN +D +L+ +L +A IMVVSVTASTT G+ L E+ +R +VESRMS+IAPNLS I+G++ AAK+MG AGGL+ L+KMPACN+ LLGA++K L+G Sbjct: 51 IAKLWDSKMFAEIMMKIEEYISKQAKASEVMGPVEAAPEYRVIVDANNLTVEIENELNIIHKFIRDKYSKRFPELESLVPNALDYIRTVKELGNSLDKCKNNENLQQILTNATIMVVSVTASTTQGQQLSEEELERLEEACDMALELNASKHRIYEYVESRMSFIAPNLSIIIGASTAAKIMGVAGGLTNLSKMPACNIMLLGAQRKTLSG 261
BLAST of CN185231 vs. ExPASy Swiss-Prot
Match: PRP31_MOUSE (U4/U6 small nuclear ribonucleoprotein Prp31 OS=Mus musculus GN=Prpf31 PE=2 SV=2) HSP 1 Score: 164.081 bits (414), Expect = 5.493e-40 Identity = 93/212 (43.87%), Postives = 127/212 (59.91%), Query Frame = 3 Query: 6 NVSKLHKCHRFTVIMQKVEAALQNGPYISNHGMVLEDDPEYQLIVDCNVPXXXXXXXXXXXHNFIRDKYRLKFPELESLVHHPIDYARVVKKIGNEMDLTL--VDLEGLLPSAIIMVVSVTASTTSGKPLPEDVFQRTIXXXXXXXXXXXXXXXXXXFVESRMSYIAPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKKKNLAG 635 +++KL F IM K+E + S +E PEY++IVD N H FIRDKY +FPELESLV + +DY R VK++GN +D +L+ +L +A IMVVSVTASTT G+ L ++ +R +VESRMS+IAPNLS I+G++ AAK+MG AGGL+ L+KMPACN+ LLGA++K L+G Sbjct: 50 SIAKLWDSKMFAEIMMKIEEYISKQANASEVMGPVEAAPEYRVIVDANNLTVEIENELNIIHKFIRDKYSKRFPELESLVPNALDYIRTVKELGNSLDKCKNNENLQQILTNATIMVVSVTASTTQGQQLSDEELERLEEACDMALELNASKHRIYEYVESRMSFIAPNLSIIIGASTAAKIMGVAGGLTNLSKMPACNIMLLGAQRKTLSG 261
BLAST of CN185231 vs. ExPASy Swiss-Prot
Match: PRP31_DANRE (U4/U6 small nuclear ribonucleoprotein Prp31 OS=Danio rerio GN=prpf31 PE=2 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 2.087e-39 Identity = 94/213 (44.13%), Postives = 127/213 (59.62%), Query Frame = 3 Query: 3 SNVSKLHKCHRFTVIMQKVEAALQNGPYISNHGMVLEDDPEYQLIVDCNVPXXXXXXXXXXXHNFIRDKYRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVD--LEGLLPSAIIMVVSVTASTTSGKPLPEDVFQRTIXXXXXXXXXXXXXXXXXXFVESRMSYIAPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKKKNLAG 635 ++++KL F IM K+ + N S +E DPEY+LIV N H F+RDKY +FPELESLV + +DY R VK++GN ++ + L+ +L +A IMVVSVTASTT G L +D QR +VESRMS+IAPNLS IVG++ AAK+MG AGGL+ L+KMPACN+ LLGA+++ L+G Sbjct: 60 TSIAKLRHSKPFAEIMDKISHYVGNQRKNSEVSGPVEADPEYRLIVAANNLTVEIDNELNIIHKFVRDKYSKRFPELESLVPNALDYIRTVKELGNNLEKCKNNETLQQILTNATIMVVSVTASTTQGTMLGDDELQRLEEACDMALELNQSKHRIYEYVESRMSFIAPNLSIIVGASTAAKIMGVAGGLTNLSKMPACNLMLLGAQRRTLSG 272
BLAST of CN185231 vs. ExPASy Swiss-Prot
Match: PRP31_SCHPO (Pre-mRNA-processing factor 31 OS=Schizosaccharomyces pombe GN=prp31 PE=2 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 6.731e-30 Identity = 70/176 (39.77%), Postives = 99/176 (56.25%), Query Frame = 3 Query: 108 LEDDPEYQLIVDCNVPXXXXXXXXXXXHNFIRDKYRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAIIMVVSVTASTTSGKPLPEDVFQRTIXXXXXXXXXXXXXXXXXXFVESRMSYIAPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKKKNLAG 635 +EDD EY LIVD N H +++ Y +FPEL SLV + DY + V + N++D + L LPSA +MV++ TA+TT GKPLP+++ + +V+SR+S +APNLSA+VGS AA L+G AGGL+ L K PACN+ LG ++ G Sbjct: 111 IEDDLEYHLIVDSNSIAMEIDDEILRLHRLVKEWYHDRFPELSSLVLNAFDYCKTVSSLLNDLDNSKTKLS-FLPSATVMVIATTATTTVGKPLPDEMIKNVKNCCEAIQQLGEEKQKIIEYVQSRISVVAPNLSAVVGSTTAANLIGIAGGLTRLGKFPACNLPALGKRRLTTIG 285
BLAST of CN185231 vs. ExPASy Swiss-Prot
Match: NOP58_SCLS1 (Nucleolar protein 58 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=NOP58 PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 3.585e-15 Identity = 44/141 (31.21%), Postives = 71/141 (50.35%), Query Frame = 3 Query: 198 IRDKYRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAIIMVVSVTASTTSGKPLPEDVFQRTIXXXXXXXXXXXXXXXXXXFVESRMSYIAPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKK 620 +++ Y FPE+ +V+ + YARV+ K+G ++ + DL +LP I + A + G + E+ ++ +RM IAPNL+ +VG V A+L+ AG L LAK PA +Q+LGA+K Sbjct: 186 VKEWYGWHFPEMGKIVNDNLAYARVILKVGMRVNTSSTDLADILPEEIEAAIKAAAEVSMGTEITEEDLDNIKLLAEQVVGFTEYRQQLSSYLSARMQAIAPNLTELVGELVGARLIAHAGSLMNLAKSPASTIQILGAEK 326
BLAST of CN185231 vs. ExPASy Swiss-Prot
Match: NOP58_EMENI (Nucleolar protein 58 OS=Emericella nidulans GN=nop58 PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 3.585e-15 Identity = 46/141 (32.62%), Postives = 73/141 (51.77%), Query Frame = 3 Query: 198 IRDKYRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAIIMVVSVTASTTSGKPLPEDVFQRTIXXXXXXXXXXXXXXXXXXFVESRMSYIAPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKK 620 +++ Y FPEL +++ I Y+R+V K+G + DL +LP I V A + G + ED + ++ +RM+ IAPNL+A+VG V A+L+ AG L+ L+K PA +Q+LGA+K Sbjct: 186 VKEWYGWHFPELAKILNDNIAYSRLVLKMGMRSNFENADLAEILPEEIEAAVKAAADRSMGTEISEDDLENIQALAEQVVGFSEYRSQLAGYITARMNAIAPNLTALVGDLVGARLIAHAGSLTNLSKSPASTLQILGAEK 326
BLAST of CN185231 vs. ExPASy Swiss-Prot
Match: NOP58_SCHPO (Nucleolar protein 58 OS=Schizosaccharomyces pombe GN=nop58 PE=1 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 4.683e-15 Identity = 44/141 (31.21%), Postives = 69/141 (48.94%), Query Frame = 3 Query: 198 IRDKYRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAIIMVVSVTASTTSGKPLPEDVFQRTIXXXXXXXXXXXXXXXXXXFVESRMSYIAPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKK 620 +R+ Y FPE+ ++ + YARV+K +G + D +LP I + A + G + E+ + ++ +RM IAPNL+A+VG V A+L+ AG L LAK PA +Q+LGA+K Sbjct: 184 VREWYGWHFPEMGKIIQDNLAYARVIKAMGMRTKCSETDFSDILPEEIEATLKSAAEISMGTEITEEDLDNIVMLADQVLELASYRAQLSEYLRNRMQAIAPNLTALVGELVGARLIAHAGSLMNLAKQPASTIQILGAEK 324
BLAST of CN185231 vs. ExPASy Swiss-Prot
Match: NOP58_CANAL (Nucleolar protein 58 OS=Candida albicans GN=NOP58 PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 4.683e-15 Identity = 46/140 (32.86%), Postives = 70/140 (50.00%), Query Frame = 3 Query: 201 RDKYRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAIIMVVSVTASTTSGKPLPEDVFQRTIXXXXXXXXXXXXXXXXXXFVESRMSYIAPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKK 620 ++ Y FPEL ++ + YAR++ +G + + DL +LP + V A + G + ED ++ SRM IAPNL+A+VG V A+L+ AG L++LAK PA VQ+LGA+K Sbjct: 185 KEWYGWHFPELAKMITDSVAYARIILTMGVRSNASETDLSEILPEEVEEQVKAAAEVSMGTEITEDDLNNIKALAEQIVDFAAYREQLSNYLSSRMKAIAPNLTAMVGELVGARLIAHAGSLTSLAKAPASTVQILGAEK 324 The following BLAST results are available for this feature:
BLAST of CN185231 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 41
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185231 ID=CN185231; Name=CN185231; organism=Citrus sinensis; type=EST; length=637bpback to top |