CN185200
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN185200 vs. ExPASy Swiss-Prot
Match: 21KD_DAUCA (21 kDa protein OS=Daucus carota PE=2 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 2.121e-36 Identity = 81/196 (41.33%), Postives = 126/196 (64.29%), Query Frame = 2 Query: 41 SKYFLILLAIFYHINSSSASRNVPSKITASTEFIKTSCSSTTYPTLCYKSLARHASLIQTSPKLLAHASLNVTLAMAKSTSAVMLKISKSLGMKPREAEAMQDCLEELSDSVDELRKSIGEMGLI---KASNFELTMNDIQTWVSAALTDETTCSDGFEKNTVNGKV---VRGQIVKIAHMTSNALALINSYASLH 610 SK L+ A+ + ++SA+ + +FIKTSC+ TTYP +C +SL+ +A IQ +P+ LA +L V+L + M +++K G+K R+ A+ DCLEE+ DS+D + +S EM + K ++F M++++TWVSAALTDETTC DGF ++GK+ VR Q+V +A +TSNALAL+N++A+ H Sbjct: 4 SKSTLVFSALLVILAAASAA--------PANQFIKTSCTLTTYPAVCEQSLSAYAKTIQNNPQELASTALQVSLTRTQQAQTFMKRLNKFKGLKARQYAAIHDCLEEVEDSLDRVSRSCDEMKNLSHAKGNDFTFRMSNVETWVSAALTDETTCMDGFAGKGMDGKIKESVRAQVVAVARVTSNALALVNNFAAKH 191
BLAST of CN185200 vs. ExPASy Swiss-Prot
Match: PME2_ARATH (Pectinesterase 2 OS=Arabidopsis thaliana GN=PME2 PE=2 SV=2) HSP 1 Score: 110.538 bits (275), Expect = 9.241e-24 Identity = 72/202 (35.64%), Postives = 117/202 (57.92%), Query Frame = 2 Query: 20 EKMESSSSKYFLILLAIFYHINSSSASRNVPSKITA----STEFIKTSCSSTTYPTLCYKSLARHASLIQTSPKLLAHASLNVTL-AMAKSTSAVMLKISKSLGMKPREAEAMQDCLEELSDSVDELRKSIGEMGLI-KASNFELTMNDIQTWVSAALTDETTCSDGFEKNTVNGKV----VRGQIVKIAHMTSNALALINS 595 +K+ SS+ L+LLA I +++ ++N KIT S +K+ CSST YP LC+ ++A TS K + ASLN+T A+ + AV I+K G+ PRE A+ DCLE + +++DEL ++ ++ K + +D++T +S+A+T++ TC DGF + + KV ++GQ V + HM SNALA+I + Sbjct: 18 KKLILSSAAIALLLLASIVGIAATTTNQNKNQKITTLSSTSHAILKSVCSSTLYPELCFSAVAATGGKELTSQKEVIEASLNLTTKAVKHNYFAVKKLIAKRKGLTPREVTALHDCLETIDETLDELHVAVEDLHQYPKQKSLRKHADDLKTLISSAITNQGTCLDGFSYDDADRKVRKALLKGQ-VHVEHMCSNALAMIKN 218
BLAST of CN185200 vs. ExPASy Swiss-Prot
Match: PME3_ARATH (Pectinesterase/pectinesterase inhibitor 3 OS=Arabidopsis thaliana GN=PME3 PE=2 SV=2) HSP 1 Score: 99.3673 bits (246), Expect = 2.130e-20 Identity = 62/202 (30.69%), Postives = 113/202 (55.94%), Query Frame = 2 Query: 11 RAREKMESSSSKYFLILLAIFYHINSSSASRNVPSKITASTEFI-KTSCSSTTYPTLCYKSLARHASLIQTSPKLLAHASLNVTL-AMAKSTSAVMLKISKSLGMKPREAEAMQDCLEELSDSVDELRKSIGEMGLIKA-SNFELTMNDIQTWVSAALTDETTCSDGFEKNTVNGKV----VRGQIVKIAHMTSNALALINS 595 + +K+ S+ L+ +A I++ ++ N ++ S+ + ++SCSST YP LC ++ + TS K + AS+N+T+ A+ + V I K G+ PRE A+ DCLE + +++DEL +++ ++ L D++T +S+A+T++ TC DGF + + +V ++GQI + HM SNALA+I + Sbjct: 15 KKNKKLVLLSAAVALLFVAAVAGISAGASKANEKRTLSPSSHAVLRSSCSSTRYPELCISAVVTAGGVELTSQKDVIEASVNLTITAVEHNYFTVKKLIKKRKGLTPREKTALHDCLETIDETLDELHETVEDLHLYPTKKTLREHAGDLKTLISSAITNQETCLDGFSHDDADKQVRKALLKGQI-HVEHMCSNALAMIKN 215
BLAST of CN185200 vs. ExPASy Swiss-Prot
Match: PMEU1_SOLLC (Pectinesterase/pectinesterase inhibitor U1 OS=Solanum lycopersicum GN=PMEU1 PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.293e-17 Identity = 55/186 (29.57%), Postives = 106/186 (56.99%), Query Frame = 2 Query: 56 ILLAIFYHINSSSASRNVPSKITASTEFIKTSCSSTTYPTLCYKSLARHASLIQ--TSPKLLAHASLNVTL-AMAKSTSAVMLKISKSLGMKPREAEAMQDCLEELSDSVDELRKSIGEMGLI-KASNFELTMNDIQTWVSAALTDETTCSDGFEKNTVNGKV----VRGQIVKIAHMTSNALALI 589 ++ + H +S ++ + +++ +K++CS+T +P LCY ++ + + TS K + SLN+T+ A+ ++ AV I G+ PRE A+ DCLE + +++DEL ++ ++ L + + + D++T +S+A+T++ TC DGF + + KV ++GQ + M SNALA+I Sbjct: 38 VVAGVKSHSKNSDDHADIMAISSSAHAIVKSACSNTLHPELCYSAIVNVSDFSKKVTSQKDVIELSLNITVKAVRRNYYAVKELIKTRKGLTPREKVALHDCLETMDETLDELHTAVEDLELYPNKKSLKEHVEDLKTLISSAITNQETCLDGFSHDEADKKVRKVLLKGQ-KHVEKMCSNALAMI 222
BLAST of CN185200 vs. ExPASy Swiss-Prot
Match: PME3_CITSI (Pectinesterase 3 OS=Citrus sinensis PE=1 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.879e-17 Identity = 56/159 (35.22%), Postives = 89/159 (55.97%), Query Frame = 2 Query: 140 IKTSCSSTTYPTLCYKSLAR--HASLIQTSPKLLAHASLNVTLAMAKSTSAVMLKISKSLGMKPREAEAMQDCLEELSDSVDELRKSIGEM-GLIKASNFELTMNDIQTWVSAALTDETTCSDGFEKNTVNGKVVRGQI----VKIAHMTSNALALINS 595 +K+SCSST YP LC+ ++A AS TS K + SLN+T + + K+ K + RE A+ DCLE + +++DEL K++ ++ + +D++T +SAA+T++ TC DGF + N K VR + V + M SNALA+I + Sbjct: 69 LKSSCSSTRYPDLCFSAIAAVPEASKKVTSQKDVIEMSLNITTTAVEHNYFGIQKLLKRTNLTKREKVALHDCLETIDETLDELHKAVEDLEEYPNKKSLSQHADDLKTLMSAAMTNQGTCLDGFSHDDAN-KHVRDALSDGQVHVEKMCSNALAMIKN 226
BLAST of CN185200 vs. ExPASy Swiss-Prot
Match: PME1_CITSI (Pectinesterase 1 OS=Citrus sinensis GN=PECS-1.1 PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.879e-17 Identity = 56/159 (35.22%), Postives = 89/159 (55.97%), Query Frame = 2 Query: 140 IKTSCSSTTYPTLCYKSLAR--HASLIQTSPKLLAHASLNVTLAMAKSTSAVMLKISKSLGMKPREAEAMQDCLEELSDSVDELRKSIGEM-GLIKASNFELTMNDIQTWVSAALTDETTCSDGFEKNTVNGKVVRGQI----VKIAHMTSNALALINS 595 +K+SCSST YP LC+ ++A AS TS K + SLN+T + + K+ K + RE A+ DCLE + +++DEL K++ ++ + +D++T +SAA+T++ TC DGF + N K VR + V + M SNALA+I + Sbjct: 69 LKSSCSSTRYPDLCFSAIAAVPEASKKVTSQKDVIEMSLNITTTAVEHNYFGIQKLLKRTNLTKREKVALHDCLETIDETLDELHKAVEDLEEYPNKKSLSQHADDLKTLMSAAMTNQGTCLDGFSHDDAN-KHVRDALSDGQVHVEKMCSNALAMIKN 226
BLAST of CN185200 vs. ExPASy Swiss-Prot
Match: PME61_ARATH (Probable pectinesterase/pectinesterase inhibitor 61 OS=Arabidopsis thaliana GN=PME61 PE=1 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.094e-16 Identity = 52/182 (28.57%), Postives = 86/182 (47.25%), Query Frame = 2 Query: 53 LILLAIFYHINSSSASRNVPSKITASTEFIKTSCSSTTYPTLCYKSLARHASLIQTSPKLLAHASLNVTLAMAKSTSAVMLKISKSLGMKPREAEAMQDCLEELSDSVDELRKSIGEMGLIKASNFELTMNDIQTWVSAALTDETTCSDGFEKNTVNGKVVRGQIV----KIAHMTSNALAL 586 ++ IF I + + + P T+ I +CS + YP LC +L + L H S N TL I+ + M PR A CLE L DSVD L +++ + ++ + +D+ TW+S+A+T+ TC+DGF++ G V+ Q++ ++ M SN LA+ Sbjct: 46 VVCFGIFAGIRAVDSGKTEPKLTRKPTQAISRTCSKSLYPNLCIDTLLDFPGSLTADENELIHISFNATLQKFSKALYTSSTITYTQ-MPPRVRSAYDSCLELLDDSVDALTRALSSVVVVSGDE---SHSDVMTWLSSAMTNHDTCTDGFDEIEGQGGEVKDQVIGAVKDLSEMVSNCLAI 223
BLAST of CN185200 vs. ExPASy Swiss-Prot
Match: PME34_ARATH (Probable pectinesterase/pectinesterase inhibitor 34 OS=Arabidopsis thaliana GN=PME34 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.931e-13 Identity = 59/203 (29.06%), Postives = 99/203 (48.77%), Query Frame = 2 Query: 8 KRAREKMESSSSKYFLILL---AIFYHINSS-SASRNVPSKITASTEFIKTSCSSTTYPTLCYKSLARH-ASLIQTSPKLLAHASLNVTLAMAKSTSAVMLKISKSLGMKPREAEAMQDCLEELSDSVDELRKSIGEMGLIKASNFELTMNDIQTWVSAALTDETTCSDGFEKNTVNG--KVVRGQIVKIAHMTSNALALINS 595 +R+++K+ SS + L+ AIF + S +++VP ++ I +C T +P LC SL SL +S K L H ++N+TL +S + M PR A C+E L DSVD L +++ + A D+ TW+SAALT+ TC++GF+ G + + ++ + SN LA+ ++ Sbjct: 39 RRSKKKLVVSSIVLAISLILAAAIFAGVRSRLKLNQSVPGLARKPSQAISKACELTRFPELCVDSLMDFPGSLAASSSKDLIHVTVNMTLHHFSHALYSSASLS-FVDMPPRARSAYDSCVELLDDSVDALSRALSSVVSSSAKP-----QDVTTWLSAALTNHDTCTEGFDGVDDGGVKDHMTAALQNLSELVSNCLAIFSA 235
BLAST of CN185200 vs. ExPASy Swiss-Prot
Match: PME3_PHAVU (Pectinesterase 3 OS=Phaseolus vulgaris GN=MPE3 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.295e-13 Identity = 52/188 (27.66%), Postives = 87/188 (46.28%), Query Frame = 2 Query: 86 SSSASRNVPSKITASTEFIKTSCSSTTYPTLCYKSLARHASLIQTSPKLLAHASLNVTLAMAKSTSAVMLKISKSLGMKPREAEAMQDCLEELSDSVDELRKSIGEMGLIKAS-NFELTMNDIQTWVSAALTDETTCSDGFEKNTVNGKVVRGQIVKI-------AHMTSNALALINSYASLHA*LET 625 SS +S +VP + +K C +T YP+ C+ S++ T P+LL SL V + S+ K+ + R +A+ C D++D L SI +G + ++++++TW+SAALTD+ TC D +N RG + +I SN+LA++ L + ET Sbjct: 59 SSPSSDSVPQTELSPAASLKAVCDTTRYPSSCFSSISSLPESNTTDPELLFKLSLRVAI---DELSSFPSKLRANAEQDARLQKAIDVCSSVFGDALDRLNDSISALGTVAGRIASSASVSNVETWLSAALTDQDTCLDAV--GELNSTAARGALQEIETAMRNSTEFASNSLAIVTKILGLLSRFET 241
BLAST of CN185200 vs. ExPASy Swiss-Prot
Match: PME28_ARATH (Putative pectinesterase/pectinesterase inhibitor 28 OS=Arabidopsis thaliana GN=PME28 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.135e-12 Identity = 49/205 (23.90%), Postives = 94/205 (45.85%), Query Frame = 2 Query: 2 RRKRAREKMESSSSKYFLILLAIFYHINSSSASRNVPSKITASTEFIKTSCSSTTYPTLCYKSLARHASLIQTSPKLLAHASLNVTLAMAKST---SAVMLKISKSLGMKPREAEAMQDCLEELSDSVDELRKSIGEMGLIKASNFELTMNDIQTWVSAALTDETTCSDGFEKNTVN-GKVVRGQIVKIAHMTSNALALINSYAS 604 +RK+ + SS +++A+ ++ + + +IT S + IK C+ T Y C +L + A + P L + N T+ S M+++ K PR A+ C E + ++ EL KS E+G + + + ++ W+SA ++ E TC DGF+ N G+ ++ + +T N LA++ ++ Sbjct: 11 KRKKRYVIISISSVLLISMVVAVTIGVSVNKSDNAGDEEITTSVKAIKDVCAPTDYKETCEDTLRKDAK-DTSDPLELVKTAFNATMKQISDVAKKSQTMIELQKD----PRAKMALDQCKELMDYAIGELSKSFEELGKFEFHKVDEALVKLRIWLSATISHEQTCLDGFQGTQGNAGETIKKALKTAVQLTHNGLAMVTEMSN 210 The following BLAST results are available for this feature:
BLAST of CN185200 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185200 ID=CN185200; Name=CN185200; organism=Citrus sinensis; type=EST; length=727bpback to top |