CN185140
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN185140 vs. ExPASy Swiss-Prot
Match: DEFA_ANTMA (Floral homeotic protein DEFICIENS OS=Antirrhinum majus GN=DEFA PE=1 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 1.601e-40 Identity = 79/152 (51.97%), Postives = 108/152 (71.05%), Query Frame = -3 Query: 337 KMFDQYQKSLGVDLWSTHYAKMQESYRKLKEINNKLRKDIRQRMGEDLDDLTFEELRGLEQNMSSSAATVRERKFHVIKTQTDTYKKKVRNLEERHGNILLDFETKYDDPHYGLVDN-GDYQSAMALANGASNLYAFRM---QQQNLHQGTG 780 ++FDQYQK++GVDLWS+HY KMQE +KL E+N LR++IRQRMGE L+DL +E++ L ++M +S +RERK+ VI Q DT KKKVRN+EE H N++L+F+ + +DPH+GLVDN GDY S + NG + A R+ LH G G Sbjct: 66 QLFDQYQKAVGVDLWSSHYEKMQEHLKKLNEVNRNLRREIRQRMGESLNDLGYEQIVNLIEDMDNSLKLIRERKYKVISNQIDTSKKKVRNVEEIHRNLVLEFDARREDPHFGLVDNEGDYNSVLGFPNGGPRIIALRLPTNHHPTLHSGGG 217
BLAST of CN185140 vs. ExPASy Swiss-Prot
Match: MADS1_PETHY (Floral homeotic protein PMADS 1 OS=Petunia hybrida GN=PMADS1 PE=2 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 1.355e-39 Identity = 82/159 (51.57%), Postives = 110/159 (69.18%), Query Frame = -3 Query: 319 KMFDQYQKSLGVDLWSTHYAKMQESYRKLKEINNKLRKDIRQRMGEDLDDLTFEELRGLEQNMSSSAATVRERKFHVIKTQTDTYKKKVRNLEERHGNILLDFETKYDDPHYGLVD-NGDYQSAMALANGASNLYAFRMQ----QQNLHQGTGGYGSSD 780 ++FD YQK++GVDLW++HY KMQE RKLKE+N LRK+IRQRMGE L+DL +E+L L +N+ +S +RERK+ VI Q +T+KKKVRN+EE H N+LL+F+ + +DP YGLV+ GDY S + NG + A R+Q Q N H G SD Sbjct: 66 QLFDLYQKTVGVDLWNSHYEKMQEQLRKLKEVNRNLRKEIRQRMGESLNDLNYEQLEELMENVDNSLKLIRERKYKVIGNQIETFKKKVRNVEEIHRNLLLEFDARQEDP-YGLVEQEGDYNSVLGFPNGGHRILALRLQPNHHQPNHHHHLHSGGGSD 223
BLAST of CN185140 vs. ExPASy Swiss-Prot
Match: MAD16_ORYSJ (MADS-box transcription factor 16 OS=Oryza sativa subsp. japonica GN=MADS16 PE=1 SV=2) HSP 1 Score: 130.954 bits (328), Expect = 7.454e-30 Identity = 69/146 (47.26%), Postives = 97/146 (66.44%), Query Frame = -3 Query: 349 MFDQYQKSLGVDLWSTHYAKMQESYRKLKEINNKLRKDIRQRMGEDLDDLTFEELRGLEQNMSSSAATVRERKFHVIKTQTDTYKKKVRNLEERHGNILLDFETKYDDPHYGLVDN-GDYQSAMALANGASNLYAFRM--QQQNLH 777 +FD+YQ+++G LW Y MQ + LK+IN LR +IRQRMGEDLD L F+ELRGLEQN+ ++ VR RK+HVI TQT+TYKKKV++ E + + + + ++P +G VDN G A A A++++AFR+ Q NLH Sbjct: 67 IFDRYQQAIGTSLWIEQYENMQRTLSHLKDINRNLRTEIRQRMGEDLDGLEFDELRGLEQNVDAALKEVRHRKYHVITTQTETYKKKVKHSYEAYETLQQELGLR-EEPAFGFVDNTGGGWDGGAGAGAAADMFAFRVVPSQPNLH 211
BLAST of CN185140 vs. ExPASy Swiss-Prot
Match: AP3_ARATH (Floral homeotic protein APETALA 3 OS=Arabidopsis thaliana GN=AP3 PE=1 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 6.976e-28 Identity = 64/145 (44.14%), Postives = 89/145 (61.38%), Query Frame = -3 Query: 349 KMFDQYQKSLGVDLWSTHYAKMQESYRKLKEINNKLRKDIRQRMGEDLDDLTFEELRGLEQNMSSSAATVRERKFHVIKTQTDTYKKKVRNLEERHGNILLDFETKYDDPHYGLVDN-GDYQSAMALANGASNLYAFRMQQQNLH 780 ++ D YQ VD+W+T Y +MQE+ RKL E N LR I+QR+GE LD+L +ELR LE M ++ VRERKF + Q +T KKK ++ ++ N++ + E + +DPHYGLVDN GDY S + S YA R Q + H Sbjct: 66 EIVDLYQTISDVDVWATQYERMQETKRKLLETNRNLRTQIKQRLGECLDELDIQELRRLEDEMENTFKLVRERKFKSLGNQIETTKKKNKSQQDIQKNLIHELELRAEDPHYGLVDNGGDYDSVLGYQIEGSRAYALRFHQNHHH 210
BLAST of CN185140 vs. ExPASy Swiss-Prot
Match: CMB2_DIACA (MADS-box protein CMB2 OS=Dianthus caryophyllus GN=CMB2 PE=2 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 9.111e-28 Identity = 62/142 (43.66%), Postives = 94/142 (66.20%), Query Frame = -3 Query: 376 KMFDQYQKSLGVDLWSTHYAKMQESYRKLKEINNKLRKDIRQRMGEDLDDLTFEELRGLEQNMSSSAATVRERKFHVIKTQTDTYKKKVRNLEERHGNILLDFETKYDDPHY--GLVDNGDYQSAMALA-----NGASNLYA 780 KM+D+YQK GVDLW + +MQE +RK+ E+N+ LR++I +RMG DL+ LT EL L+Q M + +R +K+H IK QT T +KK++NLEERH +++++ E K+ P + G D +Y++A A A A+NL+A Sbjct: 66 KMYDEYQKIEGVDLWRKQWERMQEQHRKVLELNSLLRREISRRMGGDLEGLTLVELSALQQEMEEAIIQIRNKKYHTIKNQTGTTRKKIKNLEERHTDLVMELEAKFRGPQFAIGEDDPRNYEAAAAAAVYGNDVAAANLFA 207 The following BLAST results are available for this feature:
BLAST of CN185140 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN185140 ID=CN185140; Name=CN185140; organism=Citrus sinensis; type=EST; length=782bpback to top |