CN185102

Overview
NameCN185102
Unique NameCN185102
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length784
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185102 vs. ExPASy Swiss-Prot
Match: PME61_ARATH (Probable pectinesterase/pectinesterase inhibitor 61 OS=Arabidopsis thaliana GN=PME61 PE=1 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 3.218e-49
Identity = 105/207 (50.72%), Postives = 139/207 (67.15%), Query Frame = 3
Query:  171 MGYGRLQPSSDPGGSSFREDQPGHATSAPQPXXXXXXXXXXXXXXXFALIIASAVSAVLLVGLKTSAVG---PTIGHKPTQAISRTCSKTLYPNLCVSSLLNFPGSLTASEQDLVHISFNMTLQHFSRALYFTSGISYLQMDPHVRSAFDDCLELLDDSVDALSRSLGSVLLLPGGDINKREDVLTWLSAALTNHDTCSEGFEDLNG 782
            MGY RL PS   G S+  +  P  ATS P+                 A+++   V   +  G++    G   P +  KPTQAISRTCSK+LYPNLC+ +LL+FPGSLTA E +L+HISFN TLQ FS+ALY +S I+Y QM P VRSA+D CLELLDDSVDAL+R+L SV+++ G +     DV+TWLS+A+TNHDTC++GF+++ G
Sbjct:    1 MGYDRLGPS---GPSNPNQKDP--ATSLPE---LQKKTKTKLILFTLAVLVVGVVCFGIFAGIRAVDSGKTEPKLTRKPTQAISRTCSKSLYPNLCIDTLLDFPGSLTADENELIHISFNATLQKFSKALYTSSTITYTQMPPRVRSAYDSCLELLDDSVDALTRALSSVVVVSGDE--SHSDVMTWLSSAMTNHDTCTDGFDEIEG 197          
BLAST of CN185102 vs. ExPASy Swiss-Prot
Match: PME34_ARATH (Probable pectinesterase/pectinesterase inhibitor 34 OS=Arabidopsis thaliana GN=PME34 PE=2 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 4.213e-41
Identity = 94/211 (44.55%), Postives = 127/211 (60.19%), Query Frame = 3
Query:  171 MGYGRLQPSSDPGG---SSFREDQPGHATSAPQPXXXXXXXXXXXXXXXFALIIASAVSAVLLVG----LKTSAVGPTIGHKPTQAISRTCSKTLYPNLCVSSLLNFPGSLTASE-QDLVHISFNMTLQHFSRALYFTSGISYLQMDPHVRSAFDDCLELLDDSVDALSRSLGSVLLLPGGDINKREDVLTWLSAALTNHDTCSEGFEDLN 779
            MGY RL PS   G    S+         +++ QP                 L I+  ++A +  G    LK +   P +  KP+QAIS+ C  T +P LCV SL++FPGSL AS  +DL+H++ NMTL HFS ALY ++ +S++ M P  RSA+D C+ELLDDSVDALSR+L SV+        K +DV TWLSAALTNHDTC+EGF+ ++
Sbjct:    1 MGYERLGPSGATGSVTTSTTTAPILNQVSTSEQPENNNRRSKKKLVVSSIVLAISLILAAAIFAGVRSRLKLNQSVPGLARKPSQAISKACELTRFPELCVDSLMDFPGSLAASSSKDLIHVTVNMTLHHFSHALYSSASLSFVDMPPRARSAYDSCVELLDDSVDALSRALSSVV----SSSAKPQDVTTWLSAALTNHDTCTEGFDGVD 207          
BLAST of CN185102 vs. ExPASy Swiss-Prot
Match: PME1_ARATH (Pectinesterase 1 OS=Arabidopsis thaliana GN=PME1 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 8.279e-13
Identity = 44/163 (26.99%), Postives = 79/163 (48.47%), Query Frame = 3
Query:  312 ALIIASAVSAVLLVGLKTSAVGPTIGHKPTQAISRTCSKTLYPNLCVSSLLNFPGSLTASEQDLVHISFNMTLQHFSRALYFTSGISYLQMDPHVRSAFDDCLELLDDSVDALSRSLGSVLLLPGGDINKR--------EDVLTWLSAALTNHDTCSEGFEDL 776
            A+IIA+ V+ V+      S   P     P+ ++   CS T +P  C+SS+   P S T   + L  +S  + +            +S    D  ++SA   C +L++D++D L+ ++ ++      D  K+        ED+ TWLSA +T+H+TC +  ++L
Sbjct:   41 AVIIAAVVATVVHKNKNESTPSPPPELTPSTSLKAICSVTRFPESCISSISKLPSSNTTDPETLFKLSLKVIIDELDSISDLPEKLSKETEDERIKSALRVCGDLIEDALDRLNDTVSAI-----DDEEKKKTLSSSKIEDLKTWLSATVTDHETCFDSLDEL 198          
BLAST of CN185102 vs. ExPASy Swiss-Prot
Match: PMEU1_SOLLC (Pectinesterase/pectinesterase inhibitor U1 OS=Solanum lycopersicum GN=PMEU1 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 7.009e-12
Identity = 39/126 (30.95%), Postives = 69/126 (54.76%), Query Frame = 3
Query:  408 ISRTCSKTLYPNLCVSSLLNFP--GSLTASEQDLVHISFNMTLQHFSRALYFTSGISYLQ--MDPHVRSAFDDCLELLDDSVDALSRSLGSVLLLPGGDINKR--EDVLTWLSAALTNHDTCSEGF 767
            +   CS TL+P LC S+++N         S++D++ +S N+T++   R  Y    +   +  + P  + A  DCLE +D+++D L  ++  + L P     K   ED+ T +S+A+TN +TC +GF
Sbjct:   66 VKSACSNTLHPELCYSAIVNVSDFSKKVTSQKDVIELSLNITVKAVRRNYYAVKELIKTRKGLTPREKVALHDCLETMDETLDELHTAVEDLELYPNKKSLKEHVEDLKTLISSAITNQETCLDGF 191          
BLAST of CN185102 vs. ExPASy Swiss-Prot
Match: PME3_ARATH (Pectinesterase/pectinesterase inhibitor 3 OS=Arabidopsis thaliana GN=PME3 PE=2 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.561e-11
Identity = 41/156 (26.28%), Postives = 79/156 (50.64%), Query Frame = 3
Query:  312 ALIIASAVSAVLLVGLKTSAVGPTIGHKPTQAISRTCSKTLYPNLCVSSLLNFPGSLTASEQDLVHISFNMTLQHFSRALYFTSGISYLQ--MDPHVRSAFDDCLELLDDSVDALSRSLGSVLLLPGGDINKRE--DVLTWLSAALTNHDTCSEGF 767
            AL+  +AV+ +   G   +    T+       +  +CS T YP LC+S+++   G    S++D++  S N+T+       +    +   +  + P  ++A  DCLE +D+++D L  ++  + L P     +    D+ T +S+A+TN +TC +GF
Sbjct:   28 ALLFVAAVAGIS-AGASKANEKRTLSPSSHAVLRSSCSSTRYPELCISAVVTAGGVELTSQKDVIEASVNLTITAVEHNYFTVKKLIKKRKGLTPREKTALHDCLETIDETLDELHETVEDLHLYPTKKTLREHAGDLKTLISSAITNQETCLDGF 182          
BLAST of CN185102 vs. ExPASy Swiss-Prot
Match: PME21_ARATH (Probable pectinesterase/pectinesterase inhibitor 21 OS=Arabidopsis thaliana GN=PME21 PE=2 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 2.039e-11
Identity = 51/164 (31.10%), Postives = 78/164 (47.56%), Query Frame = 3
Query:  315 LIIASAVSAVLLVGLKT---SAVGPTIGHKPTQAISRTCSKTLYPNLCVSSLLNFPGSLTASEQDLVHISFNMTLQHFSRALYFTSGISYLQMDPHVRSAFDDCLELLDDSVDALSRSLGSV-----LLLPGGDINKREDVLTWLSAALTNHDTCSEGFEDLNG 782
            L+I+  V+  + V L      + G    +   +A+   C+ T Y   C  +L+   G  T    +LV  +FN+T++  + A   +  I  LQ D   R A D C EL+D ++D LS S   +      LL    IN R     WLSAA+++ +TC EGF+   G
Sbjct:   24 LLISMVVAVTVGVSLNKHDGDSKGKAEVNASVKAVKDVCAPTDYRKTCEDTLIK-NGKNTTDPMELVKTAFNVTMKQITDAAKKSQTIMELQKDSRTRMALDQCKELMDYALDELSNSFEELGKFEFHLLDEALINLR----IWLSAAISHEETCLEGFQGTQG 182          
BLAST of CN185102 vs. ExPASy Swiss-Prot
Match: 21KD_DAUCA (21 kDa protein OS=Daucus carota PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.749e-11
Identity = 47/153 (30.72%), Postives = 78/153 (50.98%), Query Frame = 3
Query:  324 ASAVSAVLLVGLKTSAVGPTIGHKPTQAISRTCSKTLYPNLCVSSLLNFPGSLTASEQDLVHISFNMTLQHFSRALYFTSGISYLQ-MDPHVRSAFDDCLELLDDSVDALSRSLGSVLLLP---GGDINKR-EDVLTWLSAALTNHDTCSEGF 767
            ++ V + LLV L  ++  P       Q I  +C+ T YP +C  SL  +  ++  + Q+L   +  ++L    +A  F   ++  + +     +A  DCLE ++DS+D +SRS   +  L    G D   R  +V TW+SAALT+  TC +GF
Sbjct:    6 STLVFSALLVILAAASAAPA-----NQFIKTSCTLTTYPAVCEQSLSAYAKTIQNNPQELASTALQVSLTRTQQAQTFMKRLNKFKGLKARQYAAIHDCLEEVEDSLDRVSRSCDEMKNLSHAKGNDFTFRMSNVETWVSAALTDETTCMDGF 153          
The following BLAST results are available for this feature:
BLAST of CN185102 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
PME61_ARATH3.218e-4950.72Probable pectinesterase/pectinesterase inhibitor 6... [more]
PME34_ARATH4.213e-4144.55Probable pectinesterase/pectinesterase inhibitor 3... [more]
PME1_ARATH8.279e-1326.99Pectinesterase 1 OS=Arabidopsis thaliana GN=PME1 P... [more]
PMEU1_SOLLC7.009e-1230.95Pectinesterase/pectinesterase inhibitor U1 OS=Sola... [more]
PME3_ARATH1.561e-1126.28Pectinesterase/pectinesterase inhibitor 3 OS=Arabi... [more]
PME21_ARATH2.039e-1131.10Probable pectinesterase/pectinesterase inhibitor 2... [more]
21KD_DAUCA7.749e-1130.7221 kDa protein OS=Daucus carota PE=2 SV=1[more]
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Properties
Property NameValue
Genbank descriptionUCRCS04_0006M01_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006M01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185102 ID=CN185102; Name=CN185102; organism=Citrus sinensis; type=EST; length=784bp
GAGGCACCACCACCTCCTCCTTTTATAAAAACCCCACCTGCATTTTACAT
ATTATTTCGCACTTCCACATATAATTTGATTAATTATATTGTATGCAAAC
CCTCCACATTCTCCTCGAAGACCCAGCCAAACAAAAAAGACTAACTGAGG
TCATCGGTACTTGAAATCTGATGGGTTACGGCAGGCTCCAGCCCTCCTCC
GACCCCGGGGGTTCTTCATTCCGCGAGGACCAACCCGGGCATGCCACGTC
GGCGCCCCAGCCTTCTTCCCGCAGCAGGAAGAAGCTCATCCTCCTCTCCG
TCCTCTCATTCGCATTAATCATCGCCTCCGCCGTCTCCGCCGTCCTCCTC
GTGGGCCTCAAGACGAGTGCCGTGGGCCCCACCATCGGCCACAAGCCCAC
CCAGGCCATTTCCCGCACGTGCAGCAAGACCCTCTACCCGAACCTCTGCG
TCAGCTCGCTCCTCAACTTCCCGGGCTCGCTCACCGCCTCCGAGCAGGAC
CTCGTCCACATTTCGTTCAACATGACGCTGCAGCACTTCAGCAGGGCCCT
GTATTTCACCTCCGGTATCTCCTATCTCCAGATGGACCCGCACGTGCGCT
CCGCATTCGACGACTGCCTCGAGCTCCTGGACGACTCCGTGGACGCGCTC
TCACGCTCCCTCGGCTCCGTGCTGCTGCTACCCGGAGGCGATATTAATAA
AAGAGAGGACGTGCTGACGTGGCTCAGCGCAGCGCTGACCAACCACGACA
CCTGTTCGGAGGGATTTGAGGATTTGAATGGGCC
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