CN185034
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185034 vs. ExPASy Swiss-Prot
Match: DR100_ARATH (DNA-damage-repair/toleration protein DRT100 OS=Arabidopsis thaliana GN=DRT100 PE=2 SV=2) HSP 1 Score: 194.512 bits (493), Expect = 4.866e-49 Identity = 100/186 (53.76%), Postives = 126/186 (67.74%), Query Frame = 1 Query: 172 ILLTVFLAVISGVSACSPSDXXXXXXXXXXXNEPYLGIFASWTGD-NCCTNWYGVSCDPTTRRVTDISLRGESEDPILVKAGRSGYMTGSINPAICQLDTLSTLVIADWKGISGQLPSCITSLASLRVLDLVGNKISGKIPDAIGNLQKLTVLKFSRQCRLWGNPHLSLVRLSSFKSIWNLSNNPT 726 +L VF++VIS V CSP D +EP LGIF +W+ + +CC WYG+SCDP + RVTDISLRGESED I KAGRSGYM+GSI+PA+C L L++LV+ADWKGI+G++P CITSLASLR+LDL GNKI+G+IP IG L KL VL + ++ G SL L K + N T Sbjct: 12 LLAVVFISVISVVRCCSPKDQTALNAFKSSLSEPNLGIFNTWSENTDCCKEWYGISCDPDSGRVTDISLRGESEDAIFQKAGRSGYMSGSIDPAVCDLTALTSLVLADWKGITGEIPPCITSLASLRILDLAGNKITGEIPAEIGKLSKLAVLNLAEN-QMSGEIPASLTSLIELKHLELTENGIT 196
BLAST of CN185034 vs. ExPASy Swiss-Prot
Match: PGIP_PYRCO (Polygalacturonase inhibitor OS=Pyrus communis GN=PGIP PE=1 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.210e-15 Identity = 52/179 (29.05%), Postives = 85/179 (47.49%), Query Frame = 1 Query: 139 ISHANVMALPLILLTVFLAVISGVSACSPSDXXXXXXXXXXXNEPYLGIFASWTGDNCCTNWYGVSCDPTTRRVTDISL-RGESEDPILVKAGRSGY-----------MTGSINPAICQLDTLSTLVIADWKGISGQLPSCITSLASLRVLDLVGNKISGKIPDAIGNLQKLTVLKFSR 639 + + ++L L+ +V +S + C+P D +PY + ASW D C +WY V+CD TT R+ +++ G+ I G Y +TG I PAI +L L +L ++ W +SG +P ++ L +L LDL N ++G IP ++ L L L+ R Sbjct: 3 LKFSTFLSLTLLFSSVLNPALSDL--CNPDDKKVLLQIKKAFGDPY--VLASWKSDTDCCDWYCVTCDSTTNRINSLTIFAGQVSGQIPALVGDLPYLETLEFHKQPNLTGPIQPAIAKLKGLKSLRLS-WTNLSGSVPDFLSQLKNLTFLDLSFNNLTGAIPSSLSELPNLGALRLDR 176
BLAST of CN185034 vs. ExPASy Swiss-Prot
Match: PGIP2_ARATH (Polygalacturonase inhibitor 2 OS=Arabidopsis thaliana GN=PGIP2 PE=2 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 9.586e-13 Identity = 53/175 (30.29%), Postives = 79/175 (45.14%), Query Frame = 1 Query: 157 MALPLILLTVFLAVISGVSACSPSDXXXXXXXXXXXNEPYLGIFASWTGDNCCTNWYGVSCDPTT--RRVTDISLR-GESEDPILVKAGRSGYMT-----------GSINPAICQLDTLSTLVIADWKGISGQLPSCITSLASLRVLDLVGNKISGKIPDAIGNLQKLTVLKFSR 639 M L L+L T+ L C D N PY ASW C +WY + C T RVT + ++ GE I + G Y+T G I P I +L L+ L ++ W ++G +P ++ L +L +DL N +SG IP ++ +L+KL L+ SR Sbjct: 5 MTLFLLLSTLLLTTSLAKDLCHKDDKTTLLKIKKSLNNPYH--LASWDPKTDCCSWYCLECGDATVNHRVTSLIIQDGEISGQIPPEVGDLPYLTSLIFRKLTNLTGHIQPTIAKLKNLTFLRLS-WTNLTGPVPEFLSQLKNLEYIDLSFNDLSGSIPSSLSSLRKLEYLELSR 176
BLAST of CN185034 vs. ExPASy Swiss-Prot
Match: PGIP_VITVI (Polygalacturonase inhibitor OS=Vitis vinifera GN=pgip PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.789e-12 Identity = 48/153 (31.37%), Postives = 69/153 (45.10%), Query Frame = 1 Query: 217 CSPSDXXXXXXXXXXXNEPYLGIFASWTGDNCCTNWYGVSCDPTTRRVTDIS-----LRGESEDPI-------LVKAGRSGYMTGSINPAICQLDTLSTLVIADWKGISGQLPSCITSLASLRVLDLVGNKISGKIPDAIGNLQKLTVLKFSR 639 C+P D + PY I ASW + C WY V CD TT R+ ++ L G+ D + + + +TG I PAI +L L +V W +SG +P+ + L +L LDL N +SG IP ++ L L L R Sbjct: 30 CNPKDKKVLLQIKKALDNPY--ILASWNPNTDCCGWYCVECDLTTHRINSLTIFSGQLSGQIPDAVGDLPFLETLIFRKLSNLTGQIPPAIAKLKHLK-MVRLSWTNLSGPVPAFFSELKNLTYLDLSFNNLSGPIPGSLSLLPNLGALHLDR 179 The following BLAST results are available for this feature:
BLAST of CN185034 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN185034 ID=CN185034; Name=CN185034; organism=Citrus sinensis; type=EST; length=728bpback to top |