CN185010
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185010 vs. ExPASy Swiss-Prot
Match: CHI1_SOLTU (Endochitinase 1 (Fragment) OS=Solanum tuberosum GN=CHTB1 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 4.194e-14 Identity = 31/57 (54.39%), Postives = 42/57 (73.68%), Query Frame = -2 Query: 159 TNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLMAQSM 329 TNIINGG+ECG+ + V++RIGF+ +CG G+ PGDNLDC NQR +G L+ +M Sbjct: 262 TNIINGGLECGHGSDSRVQDRIGFYRRYCGILGVSPGDNLDCGNQRSFGNGLLVDTM 318
BLAST of CN185010 vs. ExPASy Swiss-Prot
Match: CHI3_SOLTU (Endochitinase 3 (Fragment) OS=Solanum tuberosum GN=CHTB3 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 1.220e-13 Identity = 30/57 (52.63%), Postives = 42/57 (73.68%), Query Frame = -2 Query: 159 TNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLMAQSM 329 TNIINGG+ECG+ + V++RIGF+ +CG G+ PGDNLDC NQR +G L+ ++ Sbjct: 262 TNIINGGLECGHGSDSRVQDRIGFYRRYCGILGVSPGDNLDCGNQRSFGNGLLVDTV 318
BLAST of CN185010 vs. ExPASy Swiss-Prot
Match: CHI2_SOLTU (Endochitinase 2 (Fragment) OS=Solanum tuberosum GN=CHTB2 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 1.220e-13 Identity = 30/57 (52.63%), Postives = 42/57 (73.68%), Query Frame = -2 Query: 159 TNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLMAQSM 329 TNIINGG+ECG+ + V++RIGF+ +CG G+ PGDNLDC NQR +G L+ ++ Sbjct: 260 TNIINGGLECGHGSDSRVQDRIGFYRRYCGILGVSPGDNLDCGNQRSFGNGLLVDTV 316
BLAST of CN185010 vs. ExPASy Swiss-Prot
Match: CHIC_SOLLC (Basic 30 kDa endochitinase OS=Solanum lycopersicum GN=CHI9 PE=1 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 2.719e-13 Identity = 30/57 (52.63%), Postives = 41/57 (71.93%), Query Frame = -2 Query: 159 TNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLMAQSM 329 TNIINGG+ECG+ + V++RIGF+ +CG G+ PG+NLDC NQR +G L+ M Sbjct: 266 TNIINGGLECGHGSDSRVQDRIGFYRRYCGILGVSPGENLDCGNQRSFGNGLLVDIM 322
BLAST of CN185010 vs. ExPASy Swiss-Prot
Match: CHI2_ORYSJ (Chitinase 2 OS=Oryza sativa subsp. japonica GN=Cht2 PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 7.910e-13 Identity = 30/48 (62.50%), Postives = 37/48 (77.08%), Query Frame = -2 Query: 186 TNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPY 329 TNI+NGG+ECG+ +D V NRIGF+ +CG FGI G NLDC NQRP+ Sbjct: 282 TNIVNGGLECGHGPDDRVANRIGFYQRYCGAFGIGTGGNLDCYNQRPF 329
BLAST of CN185010 vs. ExPASy Swiss-Prot
Match: CHIQ_TOBAC (Acidic endochitinase Q OS=Nicotiana tabacum PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.033e-12 Identity = 30/49 (61.22%), Postives = 37/49 (75.51%), Query Frame = -2 Query: 183 TNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYG 329 TNIINGGIECG NDAV +RIG++ +CG + PG+NLDC NQR +G Sbjct: 203 TNIINGGIECGIGRNDAVEDRIGYYRRYCGMLNVAPGENLDCYNQRNFG 251
BLAST of CN185010 vs. ExPASy Swiss-Prot
Match: CHI2_TOBAC (Endochitinase B OS=Nicotiana tabacum GN=CHN50 PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.033e-12 Identity = 30/57 (52.63%), Postives = 40/57 (70.18%), Query Frame = -2 Query: 159 TNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLMAQSM 329 TNIINGG+ECG + V++RIGF+ +C G+ PGDNLDC NQR +G L+ +M Sbjct: 268 TNIINGGLECGRGTDSRVQDRIGFYRRYCSILGVSPGDNLDCGNQRSFGNGLLVDTM 324
BLAST of CN185010 vs. ExPASy Swiss-Prot
Match: CHI1_TOBAC (Endochitinase A OS=Nicotiana tabacum GN=CHN48 PE=1 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 1.033e-12 Identity = 30/57 (52.63%), Postives = 40/57 (70.18%), Query Frame = -2 Query: 159 TNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLMAQSM 329 TNIINGG+ECG + V++RIGF+ +C G+ PGDNLDC NQR +G L+ +M Sbjct: 273 TNIINGGLECGRGTDSRVQDRIGFYRRYCSILGVSPGDNLDCGNQRSFGNGLLVDTM 329
BLAST of CN185010 vs. ExPASy Swiss-Prot
Match: CHI3_ORYSJ (Chitinase 3 OS=Oryza sativa subsp. japonica GN=Cht3 PE=2 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 2.302e-12 Identity = 29/48 (60.42%), Postives = 36/48 (75.00%), Query Frame = -2 Query: 186 TNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPY 329 TNIINGG+ECG+ +D V +RIGF+ +C G+ GDNLDC NQRPY Sbjct: 270 TNIINGGVECGHGADDKVADRIGFYKRYCDMLGVSYGDNLDCYNQRPY 317
BLAST of CN185010 vs. ExPASy Swiss-Prot
Match: CHI3_TOBAC (Endochitinase 3 OS=Nicotiana tabacum GN=CHN14 PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 3.926e-12 Identity = 27/57 (47.37%), Postives = 41/57 (71.93%), Query Frame = -2 Query: 159 TNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLMAQSM 329 TNIINGG+ECG+ + V++RIGF+ +C G+ PGDN+DC NQ+ + L+ ++M Sbjct: 278 TNIINGGLECGHGSDARVQDRIGFYRRYCSILGVSPGDNIDCGNQKSFNSGLLLETM 334 The following BLAST results are available for this feature:
BLAST of CN185010 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 20
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185010 ID=CN185010; Name=CN185010; organism=Citrus sinensis; type=EST; length=345bpback to top |