CN185000
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185000 vs. ExPASy Swiss-Prot
Match: NLT21_PARJU (Probable non-specific lipid-transfer protein 2 OS=Parietaria judaica PE=1 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 2.444e-20 Identity = 41/102 (40.20%), Postives = 63/102 (61.76%), Query Frame = 2 Query: 116 DPPPNAAPSLLSCDEVILDLVPCLSYLRGETKQPSAACCSGAQKISNGAKSQAAKKDVCTCIQKSLASVGPYDKNLIPLIPQKCGIPLTLPPIDAKTDCSKV 421 +P P AP +C +V+ D++PCL +++GE K+PS CCSG +K+S K+ K++ C CI ++ + L+ +P+KC I TLPPI A DCSK+ Sbjct: 23 EPAPAPAPGEEACGKVVQDIMPCLHFVKGEEKEPSKECCSGTKKLSEEVKTTEQKREACKCIVRATKGISGIKNELVAEVPKKCDIKTTLPPITADFDCSKI 124
BLAST of CN185000 vs. ExPASy Swiss-Prot
Match: NLT22_PARJU (Probable non-specific lipid-transfer protein 2 OS=Parietaria judaica PE=1 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.341e-18 Identity = 40/101 (39.60%), Postives = 60/101 (59.41%), Query Frame = 2 Query: 119 PPPNAAPSLLSCDEVILDLVPCLSYLRGETKQPSAACCSGAQKISNGAKSQAAKKDVCTCIQKSLASVGPYDKNLIPLIPQKCGIPLTLPPIDAKTDCSKV 421 P P P C +V+ ++PCL +++GE K+PS +CCSG +K+S K+ K++ C CI + + L+ +P+KCGI TLPPI A DCSK+ Sbjct: 28 PAPGEGP----CGKVVHHIMPCLKFVKGEEKEPSKSCCSGTKKLSEEVKTTEQKREACKCIVAATKGISGIKNELVAEVPKKCGITTTLPPITADFDCSKI 124
BLAST of CN185000 vs. ExPASy Swiss-Prot
Match: NLT12_PARJU (Probable non-specific lipid-transfer protein 1 OS=Parietaria judaica PE=1 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 4.037e-15 Identity = 37/104 (35.58%), Postives = 58/104 (55.77%), Query Frame = 2 Query: 119 PPPNAAPSLLSCDEVILDLVPCLSYLRGETKQPSAACCSGAQKISNGAKSQAAKKDVCTCIQKSLASVGPYDKNLIPLIPQKCGI-PLTLPPIDAKTDCSKVAI 427 PP A S +C V+ L+PCL +++G+ K+PS CCSGA+++ K+ + C CIQ ++ + D L+ +P+ CGI LPPID DC + + Sbjct: 30 PPAPAPGSEETCGTVVRALMPCLPFVQGKEKEPSKGCCSGAKRLDGETKTGLQRVHACECIQTAMKTYSDIDGKLVSEVPKHCGIVDSKLPPIDVNMDCKTLGV 133
BLAST of CN185000 vs. ExPASy Swiss-Prot
Match: NLTP_MAIZE (Non-specific lipid-transfer protein OS=Zea mays PE=1 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 4.464e-14 Identity = 34/92 (36.96%), Postives = 53/92 (57.61%), Query Frame = 2 Query: 146 LSCDEVILDLVPCLSYLRGETKQPSAACCSGAQKISNGAKSQAAKKDVCTCIQKSLASVGPYDKNLIPLIPQKCGIPLTLPPIDAKTDCSKV 421 +SC +V + PC+SY RG+ PSA CCSG + ++N A++ A ++ C C++ + A V + IP KCG+ + I TDCS+V Sbjct: 29 ISCGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAGVSGLNAGNAASIPSKCGVSIPY-TISTSTDCSRV 119
BLAST of CN185000 vs. ExPASy Swiss-Prot
Match: NLT13_PARJU (Probable non-specific lipid-transfer protein 1 OS=Parietaria judaica PE=1 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 4.464e-14 Identity = 36/103 (34.95%), Postives = 57/103 (55.34%), Query Frame = 2 Query: 122 PPNAAPSLLSCDEVILDLVPCLSYLRGETKQPSAACCSGAQKISNGAKSQAAKKDVCTCIQKSLASVGPYDKNLIPLIPQKCGI-PLTLPPIDAKTDCSKVAI 427 P A S +C V+ L+PCL +++G+ K+PS CCSGA+++ K+ + C CIQ ++ + D L+ +P+ CGI LPPID DC + + Sbjct: 30 PAPAPGSEETCGTVVGALMPCLPFVQGKEKEPSKGCCSGAKRLDGETKTGPQRVHACECIQTAMKTYSDIDGKLVSEVPKHCGIVDSKLPPIDVNMDCKTLGV 132
BLAST of CN185000 vs. ExPASy Swiss-Prot
Match: NLT11_PARJU (Probable non-specific lipid-transfer protein (Fragment) OS=Parietaria judaica GN=PMAI PE=1 SV=3) HSP 1 Score: 77.411 bits (189), Expect = 5.830e-14 Identity = 33/94 (35.11%), Postives = 54/94 (57.45%), Query Frame = 2 Query: 149 SCDEVILDLVPCLSYLRGETKQPSAACCSGAQKISNGAKSQAAKKDVCTCIQKSLASVGPYDKNLIPLIPQKCGI-PLTLPPIDAKTDCSKVAI 427 +C ++ L+PCL +++G+ K+PS CCSGA+++ K+ + C CIQ ++ + D L+ +P+ CGI LPPID DC V + Sbjct: 3 TCGTMVRALMPCLPFVQGKEKEPSKGCCSGAKRLDGETKTGPQRVHACECIQTAMKTYSDIDGKLVSEVPKHCGIVDSKLPPIDVNMDCKTVGV 96
BLAST of CN185000 vs. ExPASy Swiss-Prot
Match: NLTP3_HORVU (Non-specific lipid-transfer protein 3 OS=Hordeum vulgare GN=LTP3 PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 9.944e-14 Identity = 35/97 (36.08%), Postives = 55/97 (56.70%), Query Frame = 2 Query: 131 AAPSLLSCDEVILDLVPCLSYLRGETKQPSAACCSGAQKISNGAKSQAAKKDVCTCIQKSLASVGPYDKNLIPLIPQKCGIPLTLPPIDAKTDCSKV 421 A + +SC +V L PC+SY RG +P ACCSG ++++ A+S A K+ C C++ S+ + + +P KCG+ + PI TDC+KV Sbjct: 22 ATDAAISCGQVSSALSPCISYARGNGAKPPVACCSGVKRLAGAAQSTADKQAACRCLKSLATSIKGINMGKVSGVPGKCGVSVPF-PISMSTDCNKV 117
BLAST of CN185000 vs. ExPASy Swiss-Prot
Match: NLTP6_AMBAR (Non-specific lipid-transfer protein OS=Ambrosia artemisiifolia PE=1 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.696e-13 Identity = 35/93 (37.63%), Postives = 54/93 (58.06%), Query Frame = 2 Query: 149 SCDEVILDLVPCLSYLRGETKQPSAACCSGAQKISNGAKSQAAKKDVCTCIQKSLASVGPYDKNLIPLIPQKCGIPLTLPPIDAKTDCSKVAI 427 +CD V L PC +L G+ +PS ACC+G ++N K++A + VC CI++ S+ YD +PL+ KCG+ P +D DCSK+ + Sbjct: 29 TCDTVQNILAPCAGFLTGQ--EPSKACCTGVNNLNNSRKTKADRVAVCNCIKELTKSIA-YDPKRMPLLSTKCGVKPDFPAVDKNLDCSKLPV 118
BLAST of CN185000 vs. ExPASy Swiss-Prot
Match: NLTP3_ORYSJ (Non-specific lipid-transfer protein 3 OS=Oryza sativa subsp. japonica GN=LTP110-A PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.215e-13 Identity = 33/96 (34.38%), Postives = 53/96 (55.21%), Query Frame = 2 Query: 134 APSLLSCDEVILDLVPCLSYLRGETKQPSAACCSGAQKISNGAKSQAAKKDVCTCIQKSLASVGPYDKNLIPLIPQKCGIPLTLPPIDAKTDCSKV 421 A + +SC +V + PCLSY+ G PS++CCSG + ++ A S A ++ C+C++ +S + IP KCG+ + PI DCSK+ Sbjct: 26 ASAAVSCGDVTSSIAPCLSYVMGRESSPSSSCCSGVRTLNGKASSSADRRTACSCLKNMASSFRNLNMGNAASIPSKCGVSVAF-PISTSVDCSKI 120
BLAST of CN185000 vs. ExPASy Swiss-Prot
Match: NLTP3_ORYSI (Non-specific lipid-transfer protein 3 OS=Oryza sativa subsp. indica GN=LTP110-A PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.215e-13 Identity = 33/96 (34.38%), Postives = 53/96 (55.21%), Query Frame = 2 Query: 134 APSLLSCDEVILDLVPCLSYLRGETKQPSAACCSGAQKISNGAKSQAAKKDVCTCIQKSLASVGPYDKNLIPLIPQKCGIPLTLPPIDAKTDCSKV 421 A + +SC +V + PCLSY+ G PS++CCSG + ++ A S A ++ C+C++ +S + IP KCG+ + PI DCSK+ Sbjct: 26 ASAAVSCGDVTSSIAPCLSYVMGRESSPSSSCCSGVRTLNGKASSSADRRTACSCLKNMASSFRNLNMGNAASIPSKCGVSVAF-PISTSVDCSKI 120 The following BLAST results are available for this feature:
BLAST of CN185000 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 20
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185000 ID=CN185000; Name=CN185000; organism=Citrus sinensis; type=EST; length=590bpback to top |