CN184714
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN184714 vs. ExPASy Swiss-Prot
Match: AB8I_ARATH (UPF0051 protein ABCI8, chloroplastic OS=Arabidopsis thaliana GN=ABCI8 PE=2 SV=1) HSP 1 Score: 238.81 bits (608), Expect = 1.702e-62 Identity = 115/131 (87.79%), Postives = 127/131 (96.95%), Query Frame = -2 Query: 234 GKNTRSRIISKGISVGNSRNCYRGLVQVQSKAENARNSSQCDSMLLGDTAAANTYPYIQVKNPTARVEHEASTSKIGEDQLFYFQQRGIDYEKAMAAMISGFCRDVFNELPDEFGAEVNQLMSLKLEGSVG 626 GKNT+SRIISKGIS G+SRNCYRGLVQVQSKAE A+N+S CDSML+GD AAANTYPYIQVKNP+A+VEHEASTSKIGEDQLFYFQQRGID+E+A+AAMISGFCRDVFN+LPDEFGAEVNQLMS+KLEGSVG Sbjct: 427 GKNTKSRIISKGISAGHSRNCYRGLVQVQSKAEGAKNTSTCDSMLIGDKAAANTYPYIQVKNPSAKVEHEASTSKIGEDQLFYFQQRGIDHERALAAMISGFCRDVFNKLPDEFGAEVNQLMSIKLEGSVG 557
BLAST of CN184714 vs. ExPASy Swiss-Prot
Match: Y074_SYNY3 (UPF0051 protein slr0074 OS=Synechocystis sp. (strain PCC 6803) GN=slr0074 PE=3 SV=1) HSP 1 Score: 194.126 bits (492), Expect = 4.807e-49 Identity = 96/131 (73.28%), Postives = 111/131 (84.73%), Query Frame = -2 Query: 234 GKNTRSRIISKGISVGNSRNCYRGLVQVQSKAENARNSSQCDSMLLGDTAAANTYPYIQVKNPTARVEHEASTSKIGEDQLFYFQQRGIDYEKAMAAMISGFCRDVFNELPDEFGAEVNQLMSLKLEGSVG 626 GKNTRS IISKGIS GNS N YRGLV++ KA+ ARN SQCDSML+GD AAANT+PYIQV N TA+VEHEASTSKIGEDQLFYF QRGI E A++ ++SGFC+DV NELP EF AE ++L+SLKLEG+VG Sbjct: 350 GKNTRSIIISKGISAGNSANSYRGLVKMGPKAQGARNYSQCDSMLIGDRAAANTFPYIQVDNNTAKVEHEASTSKIGEDQLFYFAQRGISEEDAVSMLVSGFCKDVLNELPMEFAAEADKLLSLKLEGTVG 480
BLAST of CN184714 vs. ExPASy Swiss-Prot
Match: YCF24_CYAPA (UPF0051 protein ycf24 OS=Cyanophora paradoxa GN=ycf24 PE=3 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 6.941e-48 Identity = 90/131 (68.70%), Postives = 113/131 (86.26%), Query Frame = -2 Query: 234 GKNTRSRIISKGISVGNSRNCYRGLVQVQSKAENARNSSQCDSMLLGDTAAANTYPYIQVKNPTARVEHEASTSKIGEDQLFYFQQRGIDYEKAMAAMISGFCRDVFNELPDEFGAEVNQLMSLKLEGSVG 626 GKNTRSRIISKGIS G+S+N YRGLV++ KA ARN SQCDS+L+GD + ANT+P++Q+KNPTA+VEHEASTSKIGE+Q+FYF QRGI+ E+A++ +ISGFCR+VFN LP EF E ++L+ LKLEGSVG Sbjct: 356 GKNTRSRIISKGISAGHSQNSYRGLVKIGPKAVGARNYSQCDSLLIGDNSQANTFPHLQIKNPTAKVEHEASTSKIGEEQIFYFLQRGINAEEAISLIISGFCREVFNNLPMEFALEADKLLGLKLEGSVG 486
BLAST of CN184714 vs. ExPASy Swiss-Prot
Match: YCF24_PORYE (UPF0051 protein ycf24 OS=Porphyra yezoensis GN=ycf24 PE=3 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 2.638e-47 Identity = 89/131 (67.94%), Postives = 113/131 (86.26%), Query Frame = -2 Query: 234 GKNTRSRIISKGISVGNSRNCYRGLVQVQSKAENARNSSQCDSMLLGDTAAANTYPYIQVKNPTARVEHEASTSKIGEDQLFYFQQRGIDYEKAMAAMISGFCRDVFNELPDEFGAEVNQLMSLKLEGSVG 626 G NT+SRIISKGIS G S+N YRGLV+V ++ N+RN SQCDS+L+G ++ ANT+PYIQV+NPT++VEHEASTSKI EDQ+FYF QRGI+ E+++A MISGFC+DVFNELP EF E ++L+SLKLEG+VG Sbjct: 357 GNNTKSRIISKGISAGRSKNSYRGLVKVGPQSFNSRNYSQCDSLLIGQSSQANTFPYIQVQNPTSKVEHEASTSKISEDQIFYFLQRGINLEESIALMISGFCKDVFNELPMEFATEADRLLSLKLEGTVG 487
BLAST of CN184714 vs. ExPASy Swiss-Prot
Match: YCF24_ODOSI (UPF0051 protein ycf24 OS=Odontella sinensis GN=ycf24 PE=3 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 2.638e-47 Identity = 89/131 (67.94%), Postives = 111/131 (84.73%), Query Frame = -2 Query: 234 GKNTRSRIISKGISVGNSRNCYRGLVQVQSKAENARNSSQCDSMLLGDTAAANTYPYIQVKNPTARVEHEASTSKIGEDQLFYFQQRGIDYEKAMAAMISGFCRDVFNELPDEFGAEVNQLMSLKLEGSVG 626 GKNTRSRI+SKGIS GNS+N YRGLV + +KA ARN SQCDS+L+G+ + ANT+P+I V+NPTA++EHEASTSKIGE+Q+FYF QRGI EK + MISGFC++VF ELP EF AE ++L++LKLEGSVG Sbjct: 356 GKNTRSRIVSKGISAGNSKNTYRGLVNISNKAIGARNYSQCDSLLIGNLSNANTFPFISVQNPTAKIEHEASTSKIGEEQIFYFLQRGIPIEKGVELMISGFCQEVFTELPLEFAAEADRLLTLKLEGSVG 486
BLAST of CN184714 vs. ExPASy Swiss-Prot
Match: YCF24_PORPU (UPF0051 protein ycf24 OS=Porphyra purpurea GN=ycf24 PE=3 SV=1) HSP 1 Score: 186.808 bits (473), Expect = 7.674e-47 Identity = 87/131 (66.41%), Postives = 113/131 (86.26%), Query Frame = -2 Query: 234 GKNTRSRIISKGISVGNSRNCYRGLVQVQSKAENARNSSQCDSMLLGDTAAANTYPYIQVKNPTARVEHEASTSKIGEDQLFYFQQRGIDYEKAMAAMISGFCRDVFNELPDEFGAEVNQLMSLKLEGSVG 626 G NT+S+IISKGIS G S+N YRGLV++ ++ N+RN SQCDS+L+G ++ ANT+PYIQV+NPTA+VEHEASTSKI EDQ+FYF QRGI+ E++++ MISGFC+DVFNELP EF E ++L+SLKLEG+VG Sbjct: 357 GNNTKSKIISKGISAGKSKNSYRGLVKIGPQSFNSRNYSQCDSLLIGQSSQANTFPYIQVQNPTAKVEHEASTSKISEDQIFYFLQRGINLEESVSLMISGFCKDVFNELPMEFAVEADRLLSLKLEGTVG 487
BLAST of CN184714 vs. ExPASy Swiss-Prot
Match: AB9I_ARATH (Putative UPF0051 protein ABCI9 OS=Arabidopsis thaliana GN=ABCI9 PE=3 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 3.809e-46 Identity = 86/101 (85.15%), Postives = 99/101 (98.02%), Query Frame = -2 Query: 234 KAENARNSSQCDSMLLGDTAAANTYPYIQVKNPTARVEHEASTSKIGEDQLFYFQQRGIDYEKAMAAMISGFCRDVFNELPDEFGAEVNQLMSLKLEGSVG 536 +AENARN+S CDSML+GD AAANTYPYIQVKNP+AR+EHEASTSKIGEDQ+FYFQQRGID+E+A+AAMISGFCRDVFN+LP+EFGAEVNQL+S+KLEGSVG Sbjct: 370 EAENARNTSTCDSMLIGDNAAANTYPYIQVKNPSARIEHEASTSKIGEDQIFYFQQRGIDHERALAAMISGFCRDVFNKLPNEFGAEVNQLLSIKLEGSVG 470
BLAST of CN184714 vs. ExPASy Swiss-Prot
Match: YCF24_ANTSP (UPF0051 protein in atpA 3'region (Fragment) OS=Antithamnion sp. GN=ycf24 PE=3 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 2.090e-44 Identity = 84/131 (64.12%), Postives = 108/131 (82.44%), Query Frame = -2 Query: 234 GKNTRSRIISKGISVGNSRNCYRGLVQVQSKAENARNSSQCDSMLLGDTAAANTYPYIQVKNPTARVEHEASTSKIGEDQLFYFQQRGIDYEKAMAAMISGFCRDVFNELPDEFGAEVNQLMSLKLEGSVG 626 GKNT+SRI+SKGIS G S N YRGLV++ KA +RN SQCDS+LL +T+ ANT+PYIQ +NP ++EHEASTSKIGE+Q+FYF QRGI+ E A++ MISGFC++V NELP EF E ++L++LKLEG+VG Sbjct: 167 GKNTKSRILSKGISAGYSANSYRGLVKIGPKAHYSRNYSQCDSLLLSNTSKANTFPYIQAQNPYTKIEHEASTSKIGEEQIFYFLQRGINLENAISLMISGFCKEVLNELPMEFAVEADRLLNLKLEGTVG 297
BLAST of CN184714 vs. ExPASy Swiss-Prot
Match: YCF24_GALSU (UPF0051 protein in atpA 3'region (Fragment) OS=Galdieria sulphuraria GN=ycf24 PE=3 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 4.818e-41 Identity = 80/131 (61.07%), Postives = 105/131 (80.15%), Query Frame = -2 Query: 234 GKNTRSRIISKGISVGNSRNCYRGLVQVQSKAENARNSSQCDSMLLGDTAAANTYPYIQVKNPTARVEHEASTSKIGEDQLFYFQQRGIDYEKAMAAMISGFCRDVFNELPDEFGAEVNQLMSLKLEGSVG 626 GKN+RS+IISKGIS GNS N YRG V+V A ARN SQCDS+L+G+++ ANT+PYI+V N ++ +EHEAS SKI E++LFYF QRGI E+A++ ++SGFC++VF ELP EF E ++L+ LKLEGSVG Sbjct: 91 GKNSRSKIISKGISTGNSINSYRGKVKVSLNASRARNYSQCDSLLIGNSSEANTFPYIEVYNRSSIIEHEASISKINEEKLFYFMQRGISIEEAISLIVSGFCKEVFTELPLEFALEADKLLGLKLEGSVG 221
BLAST of CN184714 vs. ExPASy Swiss-Prot
Match: YCF24_GUITH (UPF0051 protein ycf24 OS=Guillardia theta GN=ycf24 PE=3 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 6.292e-41 Identity = 82/131 (62.60%), Postives = 104/131 (79.39%), Query Frame = -2 Query: 234 GKNTRSRIISKGISVGNSRNCYRGLVQVQSKAENARNSSQCDSMLLGDTAAANTYPYIQVKNPTARVEHEASTSKIGEDQLFYFQQRGIDYEKAMAAMISGFCRDVFNELPDEFGAEVNQLMSLKLEGSVG 626 G+ ++SRIISKGIS G S+N YRG V++ A + N+SQCDSML+G + ANTYPYIQV N +RVEHEASTSKI E+QLFYF QRGI E+A++ +ISGFCRDVF +LP EF E ++L+S+KLEG+VG Sbjct: 353 GRGSKSRIISKGISAGYSKNTYRGQVKININALGSINNSQCDSMLIGPYSQANTYPYIQVSNAMSRVEHEASTSKIEEEQLFYFLQRGISVEQAISLLISGFCRDVFVKLPMEFAVEADKLLSVKLEGTVG 483 The following BLAST results are available for this feature:
BLAST of CN184714 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
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Sequences
The
following sequences are available for this feature:
EST sequence >CN184714 ID=CN184714; Name=CN184714; organism=Citrus sinensis; type=EST; length=627bpback to top |