CN184579

Overview
NameCN184579
Unique NameCN184579
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length664
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3990 contig Csv1_Contig3990:181..844. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_CYAP4 (Chaperone protein dnaJ OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.411e-33
Identity = 75/150 (50.00%), Postives = 93/150 (62.00%), Query Frame = 3
Query:  222 DYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLKGAGMG---MGDFSNPFDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            DYY +LGVSR+A + ++K AYR+LAR YHPDVNKE  AE+  KEI+ AYEVLSD E R+  D+FGEAG+ GA  G   MGD     D+FES+F G                     G D  + L + F+EA+FG EK+I IT LETC TC
Sbjct:    4 DYYDILGVSRDAGQEDLKQAYRRLARKYHPDVNKEAGAEERFKEINRAYEVLSDPETRARYDRFGEAGVSGAAAGYGDMGDMGGFADIFESIFSGFGGVGAGTSRRRTGPSR----GDDLRFDLKLEFREAIFGGEKQIRITHLETCTTC 149          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_CYAA5 (Chaperone protein dnaJ OS=Cyanothece sp. (strain ATCC 51142) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.411e-33
Identity = 77/151 (50.99%), Postives = 93/151 (61.59%), Query Frame = 3
Query:  222 DYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLKGAG----MGMGDFSNPFDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            DYY +LGV RNASK ++K AYR+LAR YHPDVNKEP AE+  KEI+ AYEVLS+ + RS  D+FGEAG+ GAG      MGD     D+FE++F G                   V G D    L ++F+EAVFG EKEI I  LETC  C
Sbjct:    4 DYYDILGVDRNASKEDLKRAYRRLARKYHPDVNKEPGAEERFKEINRAYEVLSEPDTRSRYDQFGEAGVSGAGGFNYGDMGDMGGFADIFETIFSG---FGGGMGTGGTRRRTGPVKGDDLRLDLKLDFREAVFGGEKEIRIPHLETCQVC 151          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_ANAVT (Chaperone protein dnaJ OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 1.842e-33
Identity = 76/150 (50.67%), Postives = 93/150 (62.00%), Query Frame = 3
Query:  222 DYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLKGAGMG---MGDFSNPFDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            DYY +LGV+R+A K EIK AYR+LAR YHPDVNKEP AE+  KEI+ AYEVLS+ E R+  D+FG  G+ GAG+G   M D     D+FES+F G                     G D    L ++F+EAVFG EKEI I+ LETC TC
Sbjct:    4 DYYEILGVARDADKEEIKQAYRRLARKYHPDVNKEPGAEERFKEINRAYEVLSEPETRARYDRFGPEGVSGAGVGFQDMSDMGGFADIFESIFSG-FAGGGMGGPTQQRRRGGPARGDDLRLDLKLDFREAVFGGEKEIRISHLETCETC 152          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_ANASP (Chaperone protein dnaJ OS=Anabaena sp. (strain PCC 7120) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 1.842e-33
Identity = 76/150 (50.67%), Postives = 93/150 (62.00%), Query Frame = 3
Query:  222 DYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLKGAGMG---MGDFSNPFDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            DYY +LGV+R+A K EIK AYR+LAR YHPDVNKEP AE+  KEI+ AYEVLS+ E R+  D+FG  G+ GAG+G   M D     D+FES+F G                     G D    L ++F+EAVFG EKEI I+ LETC TC
Sbjct:    4 DYYEILGVARDADKEEIKQAYRRLARKYHPDVNKEPGAEERFKEINRAYEVLSEPETRARYDRFGPEGVSGAGVGFQDMSDMGGFADIFESIFSG-FAGGGMGGPTQQRRRGGPARGDDLRLDLKLDFREAVFGGEKEIRISHLETCETC 152          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_THEEB (Chaperone protein dnaJ OS=Thermosynechococcus elongatus (strain BP-1) GN=dnaJ PE=3 SV=2)

HSP 1 Score: 140.584 bits (353), Expect = 7.000e-33
Identity = 75/153 (49.02%), Postives = 92/153 (60.13%), Query Frame = 3
Query:  222 DYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLKGAG------MGMGDFSNPFDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            D+Y +LGVSR+A   E+K AYR+LAR YHPDVNKEP AE+  KEI+ AYEVLSD + R+  D+FGEAG+ G G       G+GD     D+FE+ F G                     G+D  Y L + F+EAVFG EKEI I  LETC TC
Sbjct:    4 DFYEILGVSRSADAEELKRAYRRLARKYHPDVNKEPGAEEKFKEINRAYEVLSDPQARANYDRFGEAGVSGVGAAGFSDFGIGDMGGFADIFETFFGG--------FTTSSRRQQGPTRGEDLRYDLKLEFREAVFGGEKEIRINHLETCKTC 148          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_SYNP6 (Chaperone protein dnaJ OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 9.143e-33
Identity = 74/152 (48.68%), Postives = 93/152 (61.18%), Query Frame = 3
Query:  219 SDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLKGAG----MGMGDFSNPFDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            +DYY +LGV+R+A K EIK AYR+LAR YHPDVNKEP AE   KEI+ AYEVLS+ E R+  D+FGEAG+ GAG       GD     D+FE+ F G                     G+D    L ++F++A+FG EKEI +T  ETCGTC
Sbjct:    3 ADYYQLLGVARDADKDEIKRAYRRLARKYHPDVNKEPGAEDKFKEINRAYEVLSEPETRARYDQFGEAGVSGAGAAGFQDFGDMGGFADIFETFFSG---FGGMGGQQASARRRGPTRGEDLRLDLKLDFRDAIFGGEKEIRVTHEETCGTC 151          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_MICAN (Chaperone protein dnaJ OS=Microcystis aeruginosa (strain NIES-843) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.194e-32
Identity = 75/153 (49.02%), Postives = 94/153 (61.44%), Query Frame = 3
Query:  219 SDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLKGAGMG-----MGDFSNPFDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            +DYY +LGVSR+A K +IK AYR+LAR YHPDVNKEP AE+H KEI+ AYE+LS+ E R+  D+FGEAG+ G   G     MG F+   D+FE++F G                     G+D      + F+EAVFG EKEI I  LETC TC
Sbjct:    3 TDYYEILGVSRDAGKEDIKRAYRRLARKYHPDVNKEPGAEEHFKEINRAYEILSEPETRNRYDRFGEAGVSGGAAGFDPDNMGGFA---DIFETIFSG---FGGMGGQATARRRTGPTRGEDLRLDFRLKFREAVFGGEKEIRIRHLETCQTC 149          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_ROSS1 (Chaperone protein dnaJ OS=Roseiflexus sp. (strain RS-1) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.560e-32
Identity = 81/150 (54.00%), Postives = 94/150 (62.67%), Query Frame = 3
Query:  222 DYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLKGAGMGMGDFS--NPF-DLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            DYY VLGV RNAS+ EIK A+R+LAR YHPDVNK P+AE   KEI+ AYEVLSD EKRS+ D+FG AG   A  G   FS  +PF  +FE+ F GT                    G D  Y+L I+F+EAVFGVEK IE  RLETC  C
Sbjct:    6 DYYEVLGVQRNASQDEIKKAFRRLARQYHPDVNKAPDAEAKFKEINEAYEVLSDPEKRSMYDRFGHAG-PTAAPGFDPFSSADPFSSIFETFFGGTMRGSQRGPQR----------GADLRYTLSISFEEAVFGVEKTIEFRRLETCPAC 144          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_SYNP2 (Chaperone protein dnaJ OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 3.474e-32
Identity = 73/150 (48.67%), Postives = 92/150 (61.33%), Query Frame = 3
Query:  222 DYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLKGAGMG---MGDFSNPFDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            D+Y +LGVSR+  K E+K AYR+LAR YHPDVNK+P AE+  KEI+ AYEVLS+ E R+  D+FGEAG+ GAG      GD     D+FE++F G                   + G D    L ++FKEA+FG EKEI I  LETC TC
Sbjct:    4 DFYEILGVSRDCGKDELKRAYRRLARQYHPDVNKDPGAEEKFKEINRAYEVLSEPETRARYDRFGEAGVSGAGAAGADYGDMGGFADIFETIFSG-FGGMGTGATGGGRRRSGPMRGDDLRLDLKLDFKEAIFGGEKEIRIPHLETCKTC 152          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_SYNJA (Chaperone protein dnaJ OS=Synechococcus sp. (strain JA-3-3Ab) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 3.474e-32
Identity = 74/149 (49.66%), Postives = 88/149 (59.06%), Query Frame = 3
Query:  222 DYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLKGAGMGMGDFSNPFDL--FESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            DYY +LGVSR++SK EIK AYR+LAR YHPDVNKEP AE   KEI+ AYEVLSDDE R+  D+FGEAGL GA      F +   +  F  LFE                    V G D  + L + F EA+FG EK+I I+ LE C  C
Sbjct:    4 DYYEILGVSRDSSKEEIKRAYRRLARKYHPDVNKEPGAEDRFKEINRAYEVLSDDELRARYDRFGEAGLSGAAAAASGFQDFAGIGGFADLFESFFTNFAGGGVGYSRSRQGPVRGDDLRFDLKLEFLEAIFGGEKQIRISHLEVCPVC 152          
The following BLAST results are available for this feature:
BLAST of CN184579 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_CYAP41.411e-3350.00Chaperone protein dnaJ OS=Cyanothece sp. (strain P... [more]
DNAJ_CYAA51.411e-3350.99Chaperone protein dnaJ OS=Cyanothece sp. (strain A... [more]
DNAJ_ANAVT1.842e-3350.67Chaperone protein dnaJ OS=Anabaena variabilis (str... [more]
DNAJ_ANASP1.842e-3350.67Chaperone protein dnaJ OS=Anabaena sp. (strain PCC... [more]
DNAJ_THEEB7.000e-3349.02Chaperone protein dnaJ OS=Thermosynechococcus elon... [more]
DNAJ_SYNP69.143e-3348.68Chaperone protein dnaJ OS=Synechococcus sp. (strai... [more]
DNAJ_MICAN1.194e-3249.02Chaperone protein dnaJ OS=Microcystis aeruginosa (... [more]
DNAJ_ROSS11.560e-3254.00Chaperone protein dnaJ OS=Roseiflexus sp. (strain ... [more]
DNAJ_SYNP23.474e-3248.67Chaperone protein dnaJ OS=Synechococcus sp. (strai... [more]
DNAJ_SYNJA3.474e-3249.66Chaperone protein dnaJ OS=Synechococcus sp. (strai... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0005L18_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0005L18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184579 ID=CN184579; Name=CN184579; organism=Citrus sinensis; type=EST; length=664bp
GAGGGTCCACTTTTCACTTCTTTGACCACAATTGCCCTTATGCCAGTTGG
GGAGGGAAAAGAGGCCTGCTGCAAGAAGACATCGCAAGCAGGTTAAGCTG
TCTGGCTGCTCCAAGTTCAAGCTTTTTTTCACGCGATTCCTTCTCTTTGT
TTTCTTATGCTAGTCCATCTCAGACTTCATACCGTCGTAGGGGAGCACGA
TTGATCGTTAGAGCTGATAGTGACTACTATTCAGTTCTAGGGGTGTCAAG
AAATGCAAGTAAATCTGAAATTAAAAGCGCTTATCGGAAGCTTGCAAGGA
GTTATCACCCGGATGTAAACAAAGAACCTAATGCAGAACAGCATCTCAAG
GAAATTAGCAATGCATATGAGGTTCTGTCAGATGATGAGAAACGTTCTTT
AAATGACAAATTTGGGGAGGCTGGACTTAAAGGTGCTGGTATGGGCATGG
GGGATTTCAGCAATCCTTTCGATTTGTTTGAATCACTATTTGAGGGCACG
GGTGGTATGGGCGGAATGGGGAGCATGGGGAGCAGAGCTTCCAGGAGCAG
AGCAGTTGATGGACAAGATGAATATTACAGCCTTGTCATAAATTTCAAAG
AAGCTGTTTTTGGCGTTGAAAAGGAGATTGAGATAACACGTCTTGAGACC
TGTGGCACTTGCCA
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