CX676574
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX676574 vs. ExPASy Swiss-Prot
Match: IF5_PHAVU (Eukaryotic translation initiation factor 5 OS=Phaseolus vulgaris GN=EIF5 PE=2 SV=1) HSP 1 Score: 275.789 bits (704), Expect = 1.912e-73 Identity = 151/255 (59.22%), Postives = 187/255 (73.33%), Query Frame = 2 Query: 38 DGTTKATSSRRKANVSDEDHSSPPH--------GKEEVDDD---VQWQTDTSLEAARQRIQEQLSAATADMVMLSTDESENKAKATSKAVSSPKGSHAENGNSQSHENLVDELKANLQKSITGMQLQTILGSLSGSAQEKMTALFEALFNGVEKGFSKEVVKKKNFLGAAVAEDEGLQLLLLRAIEAFCGKSSSYATKEVALVLKALYDSDVLEEEYIVQWYQEGLKGGSKNSQIWKNAKPFIEWLQSAESDSEE 769 DGT K+T S++K + SDED SP H K+E DDD VQW TDTSL+A+RQRI+EQLSA TADMVML+TDE E K KA S + ++NGNS+++ +V E+KANL+K +L + L +L AQEKM+AL EALF G EKGF +E +KKKN+ AAVAE EG Q+LLL AIE FC K +S A KEVALVLK LYD+DVLEEE IV WYQ+GLKG +KNS+IWKNA+PFI+WLQ+AES+S+E Sbjct: 194 DGTAKSTISKKKGSGSDEDRRSPTHKQIEEKEEAKDEDDDDDDGVQWLTDTSLDASRQRIKEQLSAVTADMVMLTTDEPEKKKKAASN-----QNGGSQNGNSKNYGTVVAEVKANLKKGFGASELLSHLAALPVPAQEKMSALVEALFEGTEKGFGRETLKKKNYFAAAVAE-EGSQILLLHAIEEFCCKPNSNALKEVALVLKTLYDADVLEEEAIVLWYQKGLKGDNKNSKIWKNAQPFIDWLQNAESESDE 442
BLAST of CX676574 vs. ExPASy Swiss-Prot
Match: IF5_MAIZE (Eukaryotic translation initiation factor 5 OS=Zea mays GN=EIF5 PE=2 SV=1) HSP 1 Score: 230.72 bits (587), Expect = 7.055e-60 Identity = 135/259 (52.12%), Postives = 169/259 (65.25%), Query Frame = 2 Query: 38 DGTTKATSSRRK-ANVSDEDHSSPPH--------GKEEVDDDVQWQTDTSLEAARQRIQEQLSAATADMVMLSTDESENKAKATSKAVSSPKGSHAENGNSQ-------SHENLVDELKANLQKSITGMQLQTILGSLSGSAQEKMTALFEALFNGVEKGFSKEVVKKKNFLGAAVAEDEGLQLLLLRAIEAFCGKSSSYATKEVALVLKALYDSDVLEEEYIVQWYQEGLKGGSKNSQIWKNAKPFIEWLQSAESDSE 766 D T K + A SDEDHSS P ++ DDDVQWQTDTS+EAA+QR+QEQLSAATA+MVMLST+E+E K K + S GS E N + +E L+ ++KA+L + T QL+ +L S + Q+ M A EALF GV KGF+KEVVK K +L AV DEG Q LL++AIEAF GK + A KEV +VLKALYD D+L+EE IV WY + + G K+SQ+ KNAKPF+EWLQSAESD E Sbjct: 191 DSTAKGLKKKATTATGSDEDHSSSPTRSHDGDKAAADDDDDDVQWQTDTSIEAAKQRMQEQLSAATAEMVMLSTEETEKKMKQPTHKDGSTNGSAKEIPNDKPAVTKPSPYEELIGDIKASLGSAPTPSQLKAVLASSTLPPQDVMNAPLEALFGGVGKGFTKEVVKNKKYLAVAV-PDEGAQTLLVQAIEAFGGKCNPEALKEVPVVLKALYDGDILDEETIVDWYNDAVAAG-KDSQVVKNAKPFVEWLQSAESDEE 447
BLAST of CX676574 vs. ExPASy Swiss-Prot
Match: IF5Z_ARATH (Probable eukaryotic translation initiation factor 5-2 OS=Arabidopsis thaliana GN=At1g77840 PE=2 SV=1) HSP 1 Score: 218.009 bits (554), Expect = 4.732e-56 Identity = 123/247 (49.80%), Postives = 162/247 (65.59%), Query Frame = 2 Query: 62 SRRKANVSDEDHSSPPHGK--------EEVDDDVQWQTDTSLEAARQRIQEQLSAATADMVMLSTDESENKAKATSKAVSSPKGSHAENGNSQSHE-NLVDELKANLQKSITGMQLQTILGSLSGSAQEKMTALFEALFNGVEKGFSKEVVKKKNFLGAAVA-EDEGLQLLLLRAIEAFCGKSSSY-ATKEVALVLKALYDSDVLEEEYIVQWYQEGLKGGSKNSQIWKNAKPFIEWLQSAESDSEE 769 S+ N S ++ SP H + E+ DD V+WQTDTS EAA +R+ EQLSA TA+MVMLS E E K SK+ G+ + N E NLV ++K L+K L++ + SLS Q+ M ALF ALF+GV KGF+KEV KKKN+L AA +++G Q+ LL +I FCGK+ + A KEVALVLKALYD D++EEE ++ WY++GL G K+S +WKN KPF+EWLQSAES+SEE Sbjct: 193 SKTSKNHSSDEDISPKHDENALEVDEDEDDDDGVEWQTDTSREAAEKRMMEQLSAKTAEMVMLSAMEVEEKKAPKSKS----NGNVVKTENPPPQEKNLVQDMKEYLKKGSPISALKSFISSLSEPPQDIMDALFNALFDGVGKGFAKEVTKKKNYLAAAATMQEDGSQMHLLNSIGTFCGKNGNEEALKEVALVLKALYDQDIIEEEVVLDWYEKGLTGADKSSPVWKNVKPFVEWLQSAESESEE 435
BLAST of CX676574 vs. ExPASy Swiss-Prot
Match: IF5Y_ARATH (Probable eukaryotic translation initiation factor 5-1 OS=Arabidopsis thaliana GN=At1g36730 PE=2 SV=1) HSP 1 Score: 215.312 bits (547), Expect = 3.067e-55 Identity = 129/256 (50.39%), Postives = 163/256 (63.67%), Query Frame = 2 Query: 53 ATSSRRKANVSDEDHSSPPHG---------KEEVDDDVQWQTDTSLEAARQRIQEQLSAATADMVMLSTDESENKAKATSKAVSSPKGSHAENGNSQ----SHENLVDELKANLQKSITGMQLQTILGSLSGSAQEKMTALFEALFNGVEKGFSKEVVKKKNFLGAAVAEDE----GLQLLLLRAIEAFCGKSSSYATKEVALVLKALYDSDVLEEEYIVQWYQEGLKGGSKNSQIWKNAKPFIEWLQSAESDSEE 769 AT+ K VS + SPP EE DDDVQWQTDTS EAA +R++EQLSA TA+MVMLST E + KA P+ H ENGNS+ +HE LV+E+K L + QL+T L S S + QEKM ALF ALF G KGF+KEV+KKK +L A + E Q+ LL IE+FC K+S+ A KEVALV+K LYD D+L+E+ IV+WY +G+ K+S + KN PFIEWLQ+AES+SEE Sbjct: 191 ATTGTSKDKVSKKKDHSPPRSLSDENDQADSEEDDDDVQWQTDTSREAAEKRMKEQLSAVTAEMVMLSTVEEKKPVAEVKKA---PEQVH-ENGNSKIPENAHEKLVNEIKELLSSGSSPTQLKTALASNSANPQEKMDALFSALFGGTGKGFAKEVIKKKKYLLALMMMQEEAGAPAQMGLLNGIESFCMKASAEAAKEVALVIKGLYDEDILDEDVIVEWYNKGV----KSSPVLKNVTPFIEWLQNAESESEE 438
BLAST of CX676574 vs. ExPASy Swiss-Prot
Match: IF5_DICDI (Eukaryotic translation initiation factor 5 OS=Dictyostelium discoideum GN=eif5 PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.224e-13 Identity = 59/245 (24.08%), Postives = 109/245 (44.49%), Query Frame = 2 Query: 44 TTKATSSRRKAN---VSDEDHSSPPHGKEEVDDDVQWQTDTSLEAARQRIQEQLSAATADMVMLSTDESENKAKATSKAVSSPKGSHAENGNSQSHENLVDELKANLQKSITGMQLQTILGSLSGSAQEKMTALFEALFNGVEKGFSKEVVKKKNFLGAAVAEDEGLQLLLLRAIEAFCGKSSSYATKEVALVLKALYDSDVLEEEYIVQWYQEGLKGGSKNSQIWKNAKPFIEWLQSAESDSEE 769 +TK+T A + E S ++ +DDV W TDTS +AA +R ++ + +T+ ++ + D S A + + + S ++ L+ N +L ++ + A EAL E + + VK + L +++ +L +L E C K + K + +LK L+D+ +L EE I++WY + +K+ + K K FI WL++AE + E+ Sbjct: 147 STKSTHDEALAQQPQIKKEKKSKKKKDDDDEEDDVVWFTDTSEKAAEERKKKAIGDSTSAVISMMADISVEPQSAKEEQDEDDEQEEGQEKESDPVSSISSFLETNPADQELMEKLDSVQEEFGLRSSATSKAAIEALCKNAEN--TIKFVKTQTALLKKISKRRDGKLGILLGFEELCVKDET-LLKSIQGILKNLFDAGILTEENILKWYHQ----KAKSKVVIKACKDFIAWLETAEEEEED 384 The following BLAST results are available for this feature:
BLAST of CX676574 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX676574 ID=CX676574; Name=CX676574; organism=Citrus sinensis; type=EST; length=791bpback to top |