CN189098

Overview
NameCN189098
Unique NameCN189098
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length682
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2703 contig Csv1_Contig2703:1..682. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN189098 vs. ExPASy Swiss-Prot
Match: CSLG3_ARATH (Cellulose synthase-like protein G3 OS=Arabidopsis thaliana GN=CSLG3 PE=2 SV=2)

HSP 1 Score: 319.701 bits (818), Expect = 8.970e-87
Identity = 150/226 (66.37%), Postives = 179/226 (79.20%), Query Frame = 1
Query:    4 SREKSKTSPHRFKAGALNVLLRVSAIMTNAPMVLTLDCDMSSNDPQTPLRVLCYISDPATRPNLSFVQFPQRFRGLSKNDIYASEFKRLFLINFLGMDGLKGPNYVGTGAFFCRRSLFGSPSTLISPEIPQLHPNHVVDKDKPIHESPAMLSLAHHVAGCNYENQTKWGSKMGIRYGSLVEDYYTGYLLHCEGWRSIFCNPDRPAFYGDAPTTLVDLLNQHKRWAI 681
            SREKSK S H FKAGALN LLRVS +MTN+P++LTLDCDM SNDP TP+R LCY++DP  +  L FVQFPQ F+G+SKNDIYA  +KRLF IN +G DGL GPN+VGTG FF RR  +G+PS LI PEI +L PN +V  DKPI+ +  +L+LAH VAGC YE  T WGSK+G RYGSLVEDYYTGY LHCEGWRS+FC P R AF GD+P +L+D+++Q KRWAI
Sbjct:  288 SREKSKVSSHHFKAGALNTLLRVSGVMTNSPIILTLDCDMYSNDPATPVRALCYLTDPKIKTGLGFVQFPQTFQGISKNDIYACAYKRLFEINMIGFDGLMGPNHVGTGCFFNRRGFYGAPSNLILPEIDELKPNRIV--DKPIN-AQDVLALAHRVAGCIYELNTNWGSKIGFRYGSLVEDYYTGYRLHCEGWRSVFCRPKRAAFCGDSPKSLIDVVSQQKRWAI 510          
BLAST of CN189098 vs. ExPASy Swiss-Prot
Match: CSLG1_ARATH (Cellulose synthase-like protein G1 OS=Arabidopsis thaliana GN=CSLG1 PE=2 SV=1)

HSP 1 Score: 311.612 bits (797), Expect = 2.443e-84
Identity = 145/226 (64.16%), Postives = 174/226 (76.99%), Query Frame = 1
Query:    4 SREKSKTSPHRFKAGALNVLLRVSAIMTNAPMVLTLDCDMSSNDPQTPLRVLCYISDPATRPNLSFVQFPQRFRGLSKNDIYASEFKRLFLINFLGMDGLKGPNYVGTGAFFCRRSLFGSPSTLISPEIPQLHPNHVVDKDKPIHESPAMLSLAHHVAGCNYENQTKWGSKMGIRYGSLVEDYYTGYLLHCEGWRSIFCNPDRPAFYGDAPTTLVDLLNQHKRWAI 681
            SREKSK SPH FKAGALN LLRVS +MTN+P++LTLDCDM SNDP T +R LCY++DP  +  L +VQFPQ+F G+SKNDIYA E KRLF+IN +G DGL GP +VGTG FF RR+ +G P  LI PEI +L P  + DK     +   +LSLAH+VAGC YE  T WGSK+G RYGSLVEDYYTG++LHCEGWRS+FCNP + AFYGD+P  LVDL+ Q  RWA+
Sbjct:  269 SREKSKVSPHHFKAGALNTLLRVSGVMTNSPIILTLDCDMYSNDPATLVRALCYLTDPEIKSGLGYVQFPQKFLGISKNDIYACENKRLFIINMVGFDGLMGPTHVGTGCFFNRRAFYGPPYMLILPEINELKPYRIADKSIKAQD---VLSLAHNVAGCIYEYNTNWGSKIGFRYGSLVEDYYTGFMLHCEGWRSVFCNPKKAAFYGDSPKCLVDLVGQQIRWAV 491          
BLAST of CN189098 vs. ExPASy Swiss-Prot
Match: CSLG2_ARATH (Cellulose synthase-like protein G2 OS=Arabidopsis thaliana GN=CSLG2 PE=2 SV=1)

HSP 1 Score: 308.916 bits (790), Expect = 1.583e-83
Identity = 145/226 (64.16%), Postives = 178/226 (78.76%), Query Frame = 1
Query:    4 SREKSKTSPHRFKAGALNVLLRVSAIMTNAPMVLTLDCDMSSNDPQTPLRVLCYISDPATRPNLSFVQFPQRFRGLSKNDIYASEFKRLFLINFLGMDGLKGPNYVGTGAFFCRRSLFGSPSTLISPEIPQLHPNHVVDKDKPIHESPAMLSLAHHVAGCNYENQTKWGSKMGIRYGSLVEDYYTGYLLHCEGWRSIFCNPDRPAFYGDAPTTLVDLLNQHKRWAI 681
            SREKSK SPH FKAGALN LLRVSA+MTN+P++LTLDCDM SN+P TPL  LCY+SDP    +L FVQFPQ+F+G++KNDIYASE KR F IN +G DGL GP ++GTG FF RR+ +G P+TLI PEI    PN +   DKPI ++  +L+LAH VAGCNYE  T WGSK+G RYGSLVEDY+TG++LHCEGWRSIFC+P + AFYGD+P  L D++ Q  RW++
Sbjct:  259 SREKSKVSPHHFKAGALNTLLRVSAVMTNSPIILTLDCDMYSNNPTTPLHALCYLSDPKINFDLGFVQFPQKFQGVNKNDIYASELKRPFDINTVGFDGLMGPVHMGTGCFFNRRAFYGPPTTLILPEIETFGPNRIA--DKPI-KAQDILALAHDVAGCNYECNTNWGSKIGFRYGSLVEDYFTGFMLHCEGWRSIFCSPTKAAFYGDSPKCLTDVIGQQIRWSV 481          
BLAST of CN189098 vs. ExPASy Swiss-Prot
Match: CESA9_ORYSJ (Cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA9 PE=2 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 1.602e-43
Identity = 106/282 (37.59%), Postives = 140/282 (49.65%), Query Frame = 1
Query:    4 SREKSKTSPHRFKAGALNVLLRVSAIMTNAPMVLTLDCDMSSNDPQTPLRVLCYISDPATRPNLSFVQFPQRFRGLSKNDIYASEFKRLFLINFLGMDGLKGPNYVGTGAFFCRRSLFGSPSTLISPEIPQLH--------------------PNHV-----VDKDK------------------------------PIHESPA-MLSLAHHVAGCNYENQTKWGSKMGIRYGSLVEDYYTGYLLHCEGWRSIFCNPDRPAFYGDAPTTLVDLLNQHKRWAI 681
            SREK     H  KAGA+N L+RVSA++TNAP +L LDCD   N+ +     +C++ DP     + +VQFPQRF G+  +D YA+     F IN  G+DG++GP YVGTG  F RR      +    P+ P++                     P  V     +D DK                              P   SPA +L  A HV  C YE++T WG ++G  YGS+ ED  TG+ +HC GWRS++C P R AF G AP  L D LNQ  RWA+
Sbjct:  517 SREKRPGFQHHKKAGAMNALIRVSAVLTNAPFMLNLDCDHYINNSKAIREAMCFLMDPQVGRKVCYVQFPQRFDGIDVHDRYANRNTVFFDINMKGLDGIQGPVYVGTGCVF-RRQALYGYNPPKGPKRPKMVTCDCCPCFGRKKRKHGKDGLPEAVAADGGMDSDKEMLMSQMNFEKRFGQSAAFVTSTLMEEGGVPPSSSPAALLKEAIHVISCGYEDKTDWGLELGWIYGSITEDILTGFKMHCRGWRSVYCMPKRAAFKGSAPINLSDRLNQVLRWAL 797          
BLAST of CN189098 vs. ExPASy Swiss-Prot
Match: CESA9_ORYSI (Cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA9 PE=2 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 1.602e-43
Identity = 106/282 (37.59%), Postives = 140/282 (49.65%), Query Frame = 1
Query:    4 SREKSKTSPHRFKAGALNVLLRVSAIMTNAPMVLTLDCDMSSNDPQTPLRVLCYISDPATRPNLSFVQFPQRFRGLSKNDIYASEFKRLFLINFLGMDGLKGPNYVGTGAFFCRRSLFGSPSTLISPEIPQLH--------------------PNHV-----VDKDK------------------------------PIHESPA-MLSLAHHVAGCNYENQTKWGSKMGIRYGSLVEDYYTGYLLHCEGWRSIFCNPDRPAFYGDAPTTLVDLLNQHKRWAI 681
            SREK     H  KAGA+N L+RVSA++TNAP +L LDCD   N+ +     +C++ DP     + +VQFPQRF G+  +D YA+     F IN  G+DG++GP YVGTG  F RR      +    P+ P++                     P  V     +D DK                              P   SPA +L  A HV  C YE++T WG ++G  YGS+ ED  TG+ +HC GWRS++C P R AF G AP  L D LNQ  RWA+
Sbjct:  517 SREKRPGFQHHKKAGAMNALIRVSAVLTNAPFMLNLDCDHYINNSKAIREAMCFLMDPQVGRKVCYVQFPQRFDGIDVHDRYANRNTVFFDINMKGLDGIQGPVYVGTGCVF-RRQALYGYNPPKGPKRPKMVTCDCCPCFGRKKRKHGKDGLPEAVAADGGMDSDKEMLMSQMNFEKRFGQSAAFVTSTLMEEGGVPPSSSPAALLKEAIHVISCGYEDKTDWGLELGWIYGSITEDILTGFKMHCRGWRSVYCMPKRAAFKGSAPINLSDRLNQVLRWAL 797          
BLAST of CN189098 vs. ExPASy Swiss-Prot
Match: CSLE1_ARATH (Cellulose synthase-like protein E1 OS=Arabidopsis thaliana GN=CSLE1 PE=1 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 1.771e-42
Identity = 90/227 (39.65%), Postives = 130/227 (57.27%), Query Frame = 1
Query:    4 SREKSKTSPHRFKAGALNVLLRVSAIMTNAPMVLTLDCDMSSNDPQTPLRVLCYISDPATRPNLSFVQFPQRFRGLSKNDIYASEFKRLFLINFLGMDGLKGPNYVGTGAFFCRRSLFGSPSTLISPEIPQLHPNHVVDKDKPIHES--PAMLSLAHHVAGCNYENQTKWGSKMGIRYGSLVEDYYTGYLLHCEGWRSIFCNPDRPAFYGDAPTTLVDLLNQHKRWA 678
            SREK     H FKAGA+N LLRVS+ +T   ++L LDCDM +N+ ++    LC + D      ++FVQFPQ F  +++ND+Y S  +    + FLG+DG  GP Y+GTG F  R  + G           +       ++ + IHE+  P M+     +A C YE  T+WG +MG++YG  VED  TG  + C GW+S + NP++ AF G APT L  +L Q +RW+
Sbjct:  273 SREKRPQHHHNFKAGAMNALLRVSSKITCGKIILNLDCDMYANNSKSTRDALCILLDEKEGKEIAFVQFPQCFDNVTRNDLYGSMMRVGIDVEFLGLDGNGGPLYIGTGCFHRRDVICGR----------KYGEEEEEEESERIHENLEPEMIKA---LASCTYEENTQWGKEMGVKYGCPVEDVITGLTIQCRGWKSAYLNPEKQAFLGVAPTNLHQMLVQQRRWS 486          
BLAST of CN189098 vs. ExPASy Swiss-Prot
Match: CSLE1_ORYSJ (Cellulose synthase-like protein E1 OS=Oryza sativa subsp. japonica GN=CSLE1 PE=2 SV=2)

HSP 1 Score: 171.785 bits (434), Expect = 3.021e-42
Identity = 87/226 (38.50%), Postives = 132/226 (58.41%), Query Frame = 1
Query:    4 SREKSKTSPHRFKAGALNVLLRVSAIMTNAPMVLTLDCDMSSNDPQTPLRVLCYISDPATRPNLSFVQFPQRFRGLSKNDIYASEFKRLFLINFLGMDGLKGPNYVGTGAFFCRRSLFGSPSTLISPEIPQLHPNHVVDKDKP-IHESPAMLSLAHHVAGCNYENQTKWGSKMGIRYGSLVEDYYTGYLLHCEGWRSIFCNPDRPAFYGDAPTTLVDLLNQHKRWA 678
            +REK     H FKAGALN L+RVS++++++P++L +DCDM SN+  +    LC+  D      + FVQ+PQ F  +++NDIY + F   + +   G+D + G  Y+GTG F  R  L G    + S +  +     + ++ K  I+E   +   A  +  C YE++T+WG+ +G++YG   ED  TG  +HC GW S F NP R AF G AP+TL   + QHKRW+
Sbjct:  275 AREKRPQYHHNFKAGALNALIRVSSVISDSPVILNVDCDMYSNNSDSIRDALCFFLDEEMGQKIGFVQYPQIFNNMTQNDIYGNSFNVSYHVEMCGLDSVGGCLYIGTGCFHRREILCG---RIFSKDYKENWNRGIKERGKENINE---IEEKATSLVTCTYEHRTQWGNDIGVKYGFPAEDIITGLAIHCRGWESAFINPKRAAFLGLAPSTLAQNILQHKRWS 494          
BLAST of CN189098 vs. ExPASy Swiss-Prot
Match: CSLE6_ORYSJ (Cellulose synthase-like protein E6 OS=Oryza sativa subsp. japonica GN=CSLE6 PE=2 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 8.790e-42
Identity = 85/225 (37.78%), Postives = 128/225 (56.89%), Query Frame = 1
Query:    4 SREKSKTSPHRFKAGALNVLLRVSAIMTNAPMVLTLDCDMSSNDPQTPLRVLCYISDPATRPNLSFVQFPQRFRGLSKNDIYASEFKRLFLINFLGMDGLKGPNYVGTGAFFCRRSLFGSPSTLISPEIPQLHPNHVVDKDKPIHESPAMLSLAHHVAGCNYENQTKWGSKMGIRYGSLVEDYYTGYLLHCEGWRSIFCNPDRPAFYGDAPTTLVDLLNQHKRWA 678
            +REKS    H FKAGALN L+RVSA+++++P++L +DCDM SN+  +    LC+  D      + FVQ+PQ +  ++KN+IY +    +  +   G+D   G  Y+GTG F  R  L G      S +  +     +  K++       +   A  +A C YE +T+WG+++G++YG  VED  TG  +HC GW S++  P R AF G AP TL   + QHKRW+
Sbjct:  270 AREKSPQYHHNFKAGALNALIRVSALISDSPVILNVDCDMYSNNSDSIRDALCFFLDEEMSHKIGFVQYPQNYNNMTKNNIYGNSLNVINHVEMRGLDSAGGCLYIGTGCFHRREILCGKK---FSKDYKEDWGRGI--KERGHENIDEIEEKAKSLATCTYELRTQWGNEIGVKYGCPVEDVITGLAIHCRGWESVYMEPQRAAFVGVAPATLAQTILQHKRWS 489          
BLAST of CN189098 vs. ExPASy Swiss-Prot
Match: CESA7_ARATH (Cellulose synthase A catalytic subunit 7 [UDP-forming] OS=Arabidopsis thaliana GN=CESA7 PE=1 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 7.441e-41
Identity = 99/283 (34.98%), Postives = 137/283 (48.41%), Query Frame = 1
Query:    4 SREKSKTSPHRFKAGALNVLLRVSAIMTNAPMVLTLDCDMSSNDPQTPLRVLCYISDPATRPNLSFVQFPQRFRGLSKNDIYASEFKRLFLINFLGMDGLKG--------------------------PNYVGTGAFFC-----------RRSLFGSPSTLISPEIPQLHPNHVVDKDK-------------------PIHESPA-MLSLAHHVAGCNYENQTKWGSKMGIRYGSLVEDYYTGYLLHCEGWRSIFCNPDRPAFYGDAPTTLVDLLNQHKRWAI 681
            SREK     H  KAGA+N L+RV+ ++TNAP +L LDCD   N+ +     +C++ DP     + +VQFPQRF G+  ND YA+     F IN  G+DG++G                          P  +  G   C           +  + G  + L   E  + H    ++ +K                   P   SPA +L  A HV  C YE++T+WG+++G  YGS+ ED  TG+ +HC GWRSI+C P RPAF G AP  L D LNQ  RWA+
Sbjct:  488 SREKRPGFQHHKKAGAMNALVRVAGVLTNAPFMLNLDCDHYVNNSKAVREAMCFLMDPQIGKKVCYVQFPQRFDGIDTNDRYANRNTVFFDINMKGLDGIQGPVYVGTGCVFKRQALYGYEPPKGPKRPKMISCGCCPCFGRRRKNKKFSKNDMNGDVAALGGAEGDKEHLMSEMNFEKTFGQSSIFVTSTLMEEGGVPPSSSPAVLLKEAIHVISCGYEDKTEWGTELGWIYGSITEDILTGFKMHCRGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWAL 770          
BLAST of CN189098 vs. ExPASy Swiss-Prot
Match: CESAA_ARATH (Probable cellulose synthase A catalytic subunit 10 [UDP-forming] OS=Arabidopsis thaliana GN=CESA10 PE=2 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.658e-40
Identity = 103/300 (34.33%), Postives = 136/300 (45.33%), Query Frame = 1
Query:    4 SREKSKTSPHRFKAGALNVLLRVSAIMTNAPMVLTLDCDMSSNDPQTPLRVLCYISDPATRPNLSFVQFPQRFRGLSKNDIYASEFKRLFLINFLGMDGLKGPNYVGTGAFFCR---------------------RSLFGSPSTLISPEIPQLHPNHVVDK---------------------------------DKPIHESPA--------------------MLSLAHHVAGCNYENQTKWGSKMGIRYGSLVEDYYTGYLLHCEGWRSIFCNPDRPAFYGDAPTTLVDLLNQHKRWAI 681
            SREK     H  KAGA+N L+RVSA++TN   +L +DCD   N+ +     +C++ DPA      +VQFPQRF G+  +D YA+     F IN  G+DG++GP YVGTG  F R                     +S FGS     S +IP    N  + +                                 +K   +SP                     +L  A HV  C YE +T WG ++G  YGS+ ED  TG+ +H  GW SI+C P RPAF G AP  L D LNQ  RWA+
Sbjct:  512 SREKRPGFQHHKKAGAMNALIRVSAVLTNGAYLLNVDCDHYFNNSKAIKEAMCFMMDPAIGKKCCYVQFPQRFDGIDLHDRYANRNTVFFDINLKGLDGIQGPVYVGTGCCFNRQALYGYDPVLTEEDLEPNIIVKSCFGSRKKGKSRKIPNYEDNRSIKRSDSNVPLFNMEDIDEDVEGYEDEMSLLVSQKRLEKRFGQSPVFIAATFMEQGGLPSTTNPLTLLKEAIHVISCGYEAKTDWGKEIGWIYGSVTEDILTGFKMHARGWISIYCVPSRPAFKGSAPINLSDRLNQVLRWAL 811          
The following BLAST results are available for this feature:
BLAST of CN189098 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 65
Match NameE-valueIdentityDescription
CSLG3_ARATH8.970e-8766.37Cellulose synthase-like protein G3 OS=Arabidopsis ... [more]
CSLG1_ARATH2.443e-8464.16Cellulose synthase-like protein G1 OS=Arabidopsis ... [more]
CSLG2_ARATH1.583e-8364.16Cellulose synthase-like protein G2 OS=Arabidopsis ... [more]
CESA9_ORYSJ1.602e-4337.59Cellulose synthase A catalytic subunit 9 [UDP-form... [more]
CESA9_ORYSI1.602e-4337.59Cellulose synthase A catalytic subunit 9 [UDP-form... [more]
CSLE1_ARATH1.771e-4239.65Cellulose synthase-like protein E1 OS=Arabidopsis ... [more]
CSLE1_ORYSJ3.021e-4238.50Cellulose synthase-like protein E1 OS=Oryza sativa... [more]
CSLE6_ORYSJ8.790e-4237.78Cellulose synthase-like protein E6 OS=Oryza sativa... [more]
CESA7_ARATH7.441e-4134.98Cellulose synthase A catalytic subunit 7 [UDP-form... [more]
CESAA_ARATH1.658e-4034.33Probable cellulose synthase A catalytic subunit 10... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001F01_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001F01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189098 ID=CN189098; Name=CN189098; organism=Citrus sinensis; type=EST; length=682bp
AGGTCTAGAGAGAAAAGCAAGACTTCTCCTCACCGTTTCAAAGCCGGTGC
CCTCAACGTCCTGCTTCGAGTGTCGGCTATAATGACCAATGCACCAATGG
TCTTGACATTGGACTGCGACATGAGCTCAAATGATCCTCAGACACCTCTT
CGAGTGCTGTGCTACATATCAGACCCAGCAACTCGACCAAACTTGTCATT
CGTCCAGTTCCCTCAACGTTTTCGCGGACTAAGCAAGAACGACATTTACG
CTTCTGAGTTTAAACGCTTGTTTCTGATTAATTTTCTGGGAATGGACGGG
TTAAAGGGTCCTAATTACGTTGGAACCGGAGCCTTCTTTTGTCGACGGTC
GTTATTCGGTAGCCCATCTACTCTAATTTCCCCAGAAATTCCCCAACTCC
ATCCAAACCATGTCGTTGATAAAGATAAACCAATTCATGAGTCCCCGGCC
ATGCTGTCGCTGGCTCATCACGTAGCAGGTTGCAATTATGAGAACCAAAC
CAAATGGGGGTCTAAGATGGGCATCAGATATGGCTCGTTGGTCGAGGACT
ACTACACTGGATATCTACTGCACTGCGAAGGATGGAGGTCCATATTTTGC
AATCCTGATAGGCCAGCATTTTATGGTGACGCCCCAACAACTCTCGTTGA
TTTGCTAAATCAACACAAGCGATGGGCCATTG
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