CN189017
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN189017 vs. ExPASy Swiss-Prot
Match: CH10C_ARATH (20 kDa chaperonin, chloroplastic OS=Arabidopsis thaliana GN=CPN21 PE=1 SV=2) HSP 1 Score: 245.358 bits (625), Expect = 1.761e-64 Identity = 129/183 (70.49%), Postives = 144/183 (78.69%), Query Frame = 1 Query: 70 MATAQLTASSIKVPARSLTSFDGLRPSSVKFASVG-GAPSQRSFRRLXXXXXXXXXPKYTSIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDISVKPGTQVIYSKYAGTELELNGANHLILREDDVVGILETDEIKDLKPLNDRVFIKVAEAEETTAGSLL 615 MA QLTAS + + ARSL S DGLR SSVKF+S+ G Q FRRL PKYTSIKPLGDRVLVKIK EEKT GGI LPSTAQ+KPQ GEVVAVGEG+T+GK K+DI+V G Q+IYSKYAGTE+E N HLIL+EDD+VGILET++IKDLKPLNDRVFIKVAEAEE TAG LL Sbjct: 1 MAATQLTASPVTMSARSLASLDGLRASSVKFSSLKPGTLRQSQFRRLVVKAASVVAPKYTSIKPLGDRVLVKIKEAEEKTLGGILLPSTAQSKPQGGEVVAVGEGRTIGKNKIDITVPTGAQIIYSKYAGTEVEFNDVKHLILKEDDIVGILETEDIKDLKPLNDRVFIKVAEAEEKTAGGLL 183 HSP 2 Score: 78.9518 bits (193), Expect = 2.183e-14 Identity = 41/93 (44.09%), Postives = 59/93 (63.44%), Query Frame = 1 Query: 250 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKL-DISVKPGTQVIYSKYAGTELE-LNGANHLILREDDVVGIL 522 +KPL DRV +K+ EEKT GG+ L T + KP G V+AVG G + K+ + V G+ V+YSKYAG + + +G+N++ LR DV+ IL Sbjct: 160 LKPLNDRVFIKVAEAEEKTAGGLLLTETTKEKPSIGTVIAVGPGSLDEEGKITPLPVSTGSTVLYSKYAGNDFKGKDGSNYIALRASDVMAIL 252
BLAST of CN189017 vs. ExPASy Swiss-Prot
Match: CH10C_SPIOL (20 kDa chaperonin, chloroplastic OS=Spinacia oleracea GN=CPN21 PE=2 SV=1) HSP 1 Score: 198.364 bits (503), Expect = 2.469e-50 Identity = 102/186 (54.84%), Postives = 134/186 (72.04%), Query Frame = 1 Query: 70 MATAQLTASSIKVPARSLTSFDGLRPSS----VKFASVGGAPSQRSFRRLXXXXXXXXXPKYTSIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDISVKPGTQVIYSKYAGTELELNGANHLILREDDVVGILETDEIKDLKPLNDRVFIKVAEAEETTAGSLL 615 MA LT++S + +L SF+GLR +S + + + + RSFR L KYTS+KPLGDRVL+K K VEEKT GIFLP+ AQ KPQ+GEVVA+G GK VG KL ++VK G +V+YSKY GTE+E++G++HLI++EDD++GILETD++KDLKPLNDR+ IKVAE E T+G LL Sbjct: 1 MAATHLTSTS-SLTINTLPSFEGLRSASGISKINVSVAYPSFTSRSFRGLVVRAASITTSKYTSVKPLGDRVLIKTKIVEEKTTSGIFLPTAAQKKPQSGEVVAIGSGKKVGDKKLPVAVKTGAEVVYSKYTGTEIEVDGSSHLIVKEDDIIGILETDDVKDLKPLNDRLLIKVAEVENKTSGGLL 185 HSP 2 Score: 74.3294 bits (181), Expect = 5.377e-13 Identity = 37/93 (39.78%), Postives = 61/93 (65.59%), Query Frame = 1 Query: 250 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGK-TKLDISVKPGTQVIYSKYAGTELE-LNGANHLILREDDVVGIL 522 +KPL DR+L+K+ VE KT GG+ L +++ KP G VVA G G + ++ + V G V+YSKYAG + + ++G+++++LR DV+ +L Sbjct: 162 LKPLNDRLLIKVAEVENKTSGGLLLAESSKEKPSFGTVVATGPGVLDEEGNRIPLPVCSGNTVLYSKYAGNDFKGVDGSDYMVLRVSDVMAVL 254
BLAST of CN189017 vs. ExPASy Swiss-Prot
Match: CH10_THEPX (10 kDa chaperonin OS=Thermoanaerobacter sp. (strain X514) GN=groS PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.508e-23 Identity = 51/92 (55.43%), Postives = 71/92 (77.17%), Query Frame = 1 Query: 250 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDISVKPGTQVIYSKYAGTELELNGANHLILREDDVVGILE 525 +KPLGDRV+VK+ EE T GG+ LP TA+ KPQ GEVVAVG G+ + K+++ VK G +VI+SKYAGTE++L+G +L+LRE D++ I+E Sbjct: 3 LKPLGDRVVVKVIQAEEVTKGGVILPGTAKEKPQQGEVVAVGTGQYIDGKKVELEVKVGDRVIFSKYAGTEVKLDGEEYLLLRESDILAIIE 94
BLAST of CN189017 vs. ExPASy Swiss-Prot
Match: CH10_THEP3 (10 kDa chaperonin OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=groS PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.508e-23 Identity = 51/92 (55.43%), Postives = 71/92 (77.17%), Query Frame = 1 Query: 250 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDISVKPGTQVIYSKYAGTELELNGANHLILREDDVVGILE 525 +KPLGDRV+VK+ EE T GG+ LP TA+ KPQ GEVVAVG G+ + K+++ VK G +VI+SKYAGTE++L+G +L+LRE D++ I+E Sbjct: 3 LKPLGDRVVVKVIQAEEVTKGGVILPGTAKEKPQQGEVVAVGTGQYIDGKKVELEVKVGDRVIFSKYAGTEVKLDGEEYLLLRESDILAIIE 94
BLAST of CN189017 vs. ExPASy Swiss-Prot
Match: CH10_THEBR (10 kDa chaperonin OS=Thermoanaerobacter brockii GN=groS PE=1 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.508e-23 Identity = 51/92 (55.43%), Postives = 71/92 (77.17%), Query Frame = 1 Query: 250 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDISVKPGTQVIYSKYAGTELELNGANHLILREDDVVGILE 525 +KPLGDRV+VK+ EE T GG+ LP TA+ KPQ GEVVAVG G+ + K+++ VK G +VI+SKYAGTE++L+G +L+LRE D++ I+E Sbjct: 3 LKPLGDRVVVKVIQAEEVTKGGVILPGTAKEKPQQGEVVAVGTGEYIDGKKVELEVKVGDRVIFSKYAGTEVKLDGEEYLLLRESDILAIIE 94
BLAST of CN189017 vs. ExPASy Swiss-Prot
Match: CH10_RHOMR (10 kDa chaperonin OS=Rhodothermus marinus GN=groS PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.508e-23 Identity = 48/95 (50.53%), Postives = 73/95 (76.84%), Query Frame = 1 Query: 250 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDISVKPGTQVIYSKYAGTELELNGANHLILREDDVVGILETDE 534 IKPL DRV++K + EEKT+ G+++P TA+ KPQ G V+AVG G+ TK+++SVK G +V+Y KYAGTE+ ++G +LI+RE D++GI+E ++ Sbjct: 6 IKPLSDRVVIKPEPPEEKTESGLYIPDTAKEKPQRGTVIAVGPGRVENGTKIEMSVKEGDKVLYGKYAGTEITIDGEEYLIMRETDILGIIEEEK 100
BLAST of CN189017 vs. ExPASy Swiss-Prot
Match: CH10_NATTJ (10 kDa chaperonin OS=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) GN=groS PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 9.777e-23 Identity = 49/94 (52.13%), Postives = 73/94 (77.66%), Query Frame = 1 Query: 247 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGK-TKLDISVKPGTQVIYSKYAGTELELNGANHLILREDDVVGILE 525 ++KPLGDR+++KI EEKT+ GI LP A+ KPQ GEVVAVG GKT+ +K++ VK G +V+YSK+AG E+E++G +LI+R+DD++ ++E Sbjct: 2 NLKPLGDRIVIKILEAEEKTESGIVLPEKAKEKPQEGEVVAVGSGKTLDDGSKVEPEVKAGDKVVYSKFAGNEVEVDGEEYLIMRQDDILAVIE 95
BLAST of CN189017 vs. ExPASy Swiss-Prot
Match: CH10_THETN (10 kDa chaperonin OS=Thermoanaerobacter tengcongensis GN=groS PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.178e-22 Identity = 50/92 (54.35%), Postives = 70/92 (76.09%), Query Frame = 1 Query: 250 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDISVKPGTQVIYSKYAGTELELNGANHLILREDDVVGILE 525 +KPLGDRV+VK+ EE T GG+ LP TA+ KPQ GEVVAVG G+ + +++ VK G +VI+SKYAGTE++L+G +L+LRE D++ I+E Sbjct: 3 LKPLGDRVVVKVIQSEEVTKGGVILPGTAKEKPQQGEVVAVGPGQYIDGKRVEPEVKVGDRVIFSKYAGTEVKLDGEEYLLLRESDILAIIE 94
BLAST of CN189017 vs. ExPASy Swiss-Prot
Match: CH10_DESVM (10 kDa chaperonin OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) GN=groS PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.178e-22 Identity = 52/94 (55.32%), Postives = 69/94 (73.40%), Query Frame = 1 Query: 247 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKL-DISVKPGTQVIYSKYAGTELELNGANHLILREDDVVGILE 525 ++KPL DRVLVK EEKT GG+F+P TA+ KP GEVVA G GK KL ++VK G V++SKYAGTE++L+G HL++REDD++ I+E Sbjct: 2 NLKPLNDRVLVKRLESEEKTAGGLFIPDTAKEKPSRGEVVAAGPGKVAEDGKLIAMTVKKGDTVLFSKYAGTEIKLDGVEHLVMREDDILAIIE 95
BLAST of CN189017 vs. ExPASy Swiss-Prot
Match: CH10_DESVV (10 kDa chaperonin OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=groS PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 2.845e-22 Identity = 50/94 (53.19%), Postives = 70/94 (74.47%), Query Frame = 1 Query: 247 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKL-DISVKPGTQVIYSKYAGTELELNGANHLILREDDVVGILE 525 ++KPL DRVLVK EEKT GG+++P TA+ KP GEVVA G GKT KL ++VK G V+++KYAGTE++++G HL++REDD++ I+E Sbjct: 2 NLKPLNDRVLVKRLESEEKTAGGLYIPDTAKEKPSRGEVVAAGPGKTADDGKLVAMTVKAGDMVLFNKYAGTEIKIDGVEHLVMREDDILAIIE 95 The following BLAST results are available for this feature:
BLAST of CN189017 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189017 ID=CN189017; Name=CN189017; organism=Citrus sinensis; type=EST; length=617bpback to top |