CN188892
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188892 vs. ExPASy Swiss-Prot
Match: SCL8_ARATH (Scarecrow-like protein 8 OS=Arabidopsis thaliana GN=SCL8 PE=2 SV=1) HSP 1 Score: 288.886 bits (738), Expect = 2.094e-77 Identity = 156/267 (58.43%), Postives = 191/267 (71.54%), Query Frame = 2 Query: 8 QATNSKGNSEQRLMEHMCSALKSRVNPHENPPPVAELFGKEHAESTQLLYDFSPCFSLGFMAANLAILEATMEQTTGNTIGSNKIHVIDFDIGQGGQYMNLFHALSARLNGKPA-----IVKVTAVADGT-------ASEEKLKAVRDKLSQVAERVGVCLRFNVAICLKFDDLSRDSLGCEPDETLAVNFAFKLFRMPDESVSTENPRDELLRRVKGLSPSVVTLVEQETNTNTAPFMARVNEACAYYGALFDSIESTVLRDHSDR 772 Q N + NSE++L++ M +AL+SR+ PV EL+GKEH STQLLY+ SPCF LGF AANLAIL+A G I HVIDFDIG+GGQY+NL LS R NGK +VK+TAVA+ EE+LKAV D LSQ+ +R+G+ + FNV L+ DL+R+SLGC+PDETLAVN AFKL+R+PDESV TENPRDELLRRVKGL P VVTLVEQE N+NTAPF+ RV+E+CA YGAL +S+ESTV +SDR Sbjct: 293 QTPNLERNSEEKLVDFMVAALRSRI-----ASPVTELYGKEHLISTQLLYELSPCFKLGFEAANLAILDAADNNDGGMMIP----HVIDFDIGEGGQYVNLLRTLSTRRNGKSQSQNSPVVKITAVANNVYGCLVDDGGEERLKAVGDLLSQLGDRLGISVSFNVVTSLRLGDLNRESLGCDPDETLAVNLAFKLYRVPDESVCTENPRDELLRRVKGLKPRVVTLVEQEMNSNTAPFLGRVSESCACYGALLESVESTVPSTNSDR 550
BLAST of CN188892 vs. ExPASy Swiss-Prot
Match: SCL1_ARATH (Scarecrow-like protein 1 OS=Arabidopsis thaliana GN=SCL1 PE=2 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 3.987e-44 Identity = 107/268 (39.93%), Postives = 154/268 (57.46%), Query Frame = 2 Query: 8 QATNSKGNSEQRLMEHMCSALKSRVNPH----------ENPPPVAELFGKEHAESTQLLYDFSPCFSLGFMAANLAILEATMEQTTGNTIGSNKIHVIDFDIGQGGQYMNLFHALSARLNGKPAIVKVTAVADGTASEEKLKAVRD---KLSQVAERVGVCLRFNVAICLKFDDLSRDSLGCEPDETLAVNFAFKLFRMPDESVSTENPRDELLRRVKGLSPSVVTLVEQETNTNTAPFMARVNEACAYYGALFDSIESTVLRDHSDR 772 Q + +G+ QR+ +M L +R+ + PP E + Q+L++ PCF GF+AAN AILEA G ++H+IDFDI QG QYM L ++ A L GK +++T + D + + + +R +L Q+AE GV +F A+ K +S +LGC+P ETL VNFAF+L MPDESV+T N RDELL VK L+P +VT+VEQ+ NTNT+PF R EA YY A+F+S++ T+ R+ +R Sbjct: 250 QIVSIQGDPSQRIAAYMVEGLAARMAASGKFIYRALKCKEPP------SDERLAAMQVLFEVCPCFKFGFLAANGAILEAIK--------GEEEVHIIDFDINQGNQYMTLIRSI-AELPGKRPRLRLTGIDDPESVQRSIGGLRIIGLRLEQLAEDNGVSFKFK-AMPSKTSIVSPSTLGCKPGETLIVNFAFQLHHMPDESVTTVNQRDELLHMVKSLNPKLVTVVEQDVNTNTSPFFPRFIEAYEYYSAVFESLDMTLPRESQER 501
BLAST of CN188892 vs. ExPASy Swiss-Prot
Match: PAT1_ARATH (Scarecrow-like transcription factor PAT1 OS=Arabidopsis thaliana GN=PAT1 PE=2 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 6.800e-44 Identity = 103/227 (45.37%), Postives = 138/227 (60.79%), Query Frame = 2 Query: 101 PPVAELFGKEHAESTQLLYDFSPCFSLGFMAANLAILEATMEQTTGNTIGSNKIHVIDFDIGQGGQYMNLFHALSARLNGKPAIVKVTAVADGTASEEK---LKAVRDKLSQVAERVGVCLRFNVAICLKFDDLSRDSLGCEPDETLAVNFAFKLFRMPDESVSTENPRDELLRRVKGLSPSVVTLVEQETNTNTAPFMARVNEACAYYGALFDSIESTVLRDHSDR 772 P EL H +LY+ P F G+M+AN AI EA E+ N++H+IDF IGQG Q++ L A +AR G P I ++T + D T++ + L V ++L+++A++ V FN ++ + ++ +LG P E LAVNFAF L MPDESVSTEN RD LLR VK LSP VVTLVEQE+NTNTA F R E YY A+F+SI+ T+ RDH R Sbjct: 188 PASTELLSYMH-----ILYEVCPYFKFGYMSANGAIAEAMKEE--------NRVHIIDFQIGQGSQWVTLIQAFAARPGGPPRI-RITGIDDMTSAYARGGGLSIVGNRLAKLAKQFNVPFEFN-SVSVSVSEVKPKNLGVRPGEALAVNFAFVLHHMPDESVSTENHRDRLLRMVKSLSPKVVTLVEQESNTNTAAFFPRFMETMNYYAAMFESIDVTLPRDHKQR 399
BLAST of CN188892 vs. ExPASy Swiss-Prot
Match: SCL21_ARATH (Scarecrow-like protein 21 OS=Arabidopsis thaliana GN=SCL21 PE=1 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 8.602e-39 Identity = 92/208 (44.23%), Postives = 129/208 (62.02%), Query Frame = 2 Query: 149 LLYDFSPCFSLGFMAANLAILEATMEQTTGNTIGSNKIHVIDFDIGQGGQYMNLFHALSARLNGKPAIVKVTAVADGTASEEKLKAVRDKLSQVAERVGVCLRFNVAICLKFDDLSRDSLGCEPDETLAVNFAFKLFRMPDESVSTENPRDELLRRVKGLSPSVVTLVEQETNTNTAPFMARVNEACAYYGALFDSIESTVLRDHSDR 772 +L++ P F G+M+AN AI EA ++ +IH+IDF IGQG Q++ L A +AR G P I ++T V DG+ L V+ +L ++A++ V RFN A+ ++ ++L E L VNFA+ L +PDESVS EN RD LLR VK LSP VVTLVEQE NTNT+PF+ R E +YY A+F+SI+ + R+H +R Sbjct: 129 VLHEVCPYFKFGYMSANGAIAEAMKDE--------ERIHIIDFQIGQGSQWIALIQAFAARPGGAPNI-RITGVGDGSV----LVTVKKRLEKLAKKFDVPFRFN-AVSRPSCEVEVENLDVRDGEALGVNFAYMLHHLPDESVSMENHRDRLLRMVKSLSPKVVTLVEQECNTNTSPFLPRFLETLSYYTAMFESIDVMLPRNHKER 322
BLAST of CN188892 vs. ExPASy Swiss-Prot
Match: SCL5_ARATH (Scarecrow-like protein 5 OS=Arabidopsis thaliana GN=SCL5 PE=2 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 5.576e-38 Identity = 105/263 (39.92%), Postives = 145/263 (55.13%), Query Frame = 2 Query: 8 QATNSKGNSEQRLMEHMCSALKSRVNPHENPPPVA----ELFGKEHAESTQLLYDFSPCFSLGFMAANLAILEATMEQTTGNTIGSNKIHVIDFDIGQGGQYMNLFHALSARLNGKPAIVKVTAVADGTASEEK---LKAVRDKLSQVAERVGVCLRFN-VAICLKFDDLSRDSLGCEPDETLAVNFAFKLFRMPDESVSTENPRDELLRRVKGLSPSVVTLVEQETNTNTAPFMARVNEACAYYGALFDSIESTVLRDHSDR 772 Q + G QRL +M L +R+ + A + G E +LY+ P F G+ +AN AI EA ++ +H+IDF I QGGQ+++L AL AR G P V++T + D +S + L+ V +L ++AE GV F+ A+C ++ + LG E LAVNF L MPDESV+ EN RD LLR VK LSP+VVTLVEQE NTNTAPF+ R E +Y A+F+SI+ + RDH +R Sbjct: 255 QMVSVSGEPVQRLGAYMLEGLVARLASSGSSIYKALRCKDPTGPELLTYMHILYEACPYFKFGYESANGAIAEAVKNESF--------VHIIDFQISQGGQWVSLIRALGARPGGPPN-VRITGIDDPRSSFARQGGLELVGQRLGKLAEMCGVPFEFHGAALCCT--EVEIEKLGVRNGEALAVNFPLVLHHMPDESVTVENHRDRLLRLVKHLSPNVVTLVEQEANTNTAPFLPRFVETMNHYLAVFESIDVKLARDHKER 506
BLAST of CN188892 vs. ExPASy Swiss-Prot
Match: CIGR1_ORYSJ (Chitin-inducible gibberellin-responsive protein 1 OS=Oryza sativa subsp. japonica GN=CIGR1 PE=2 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 1.242e-37 Identity = 92/219 (42.01%), Postives = 125/219 (57.08%), Query Frame = 2 Query: 125 KEHAESTQLLYDFSPCFSLGFMAANLAILEATMEQTTGNTIGSNKIHVIDFDIGQGGQYMNLFHALSARLNGKPAIVKVTAVADGT---ASEEKLKAVRDKLSQVAERVGVCLRFNVAICLKFDDLSRDSLGCEPDETLAVNFAFKLFRMPDESVSTENPRDELLRRVKGLSPSVVTLVEQETNTNTAPFMARVNEACAYYGALFDSIESTVLRDHSDR 772 KE ++LY+ P F G+MAAN AI EA + N IH+IDF I QG Q++ L AL+AR G P V++T + D A E L V L ++E + L F + + ++++ L P E L+VNF +L PDESV NPRD LLR VKGLSP V TLVEQE++TNT PF+ R E YY A+F+SI++ + RD+ +R Sbjct: 272 KELLSYMRILYNICPYFKFGYMAANGAIAEALRTE--------NNIHIIDFQIAQGTQWITLIQALAARPGGPPR-VRITGIDDPVSEYARGEGLDIVGKMLKSMSEEFKIPLEFT-PLSVYATQVTKEMLEIRPGEALSVNFTLQLHHTPDESVDVNNPRDGLLRMVKGLSPKVTTLVEQESHTNTTPFLMRFGETMEYYSAMFESIDANLPRDNKER 480
BLAST of CN188892 vs. ExPASy Swiss-Prot
Match: SCL13_ARATH (Scarecrow-like protein 13 OS=Arabidopsis thaliana GN=SCL13 PE=2 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 4.720e-37 Identity = 98/256 (38.28%), Postives = 141/256 (55.08%), Query Frame = 2 Query: 26 GNSEQRLMEHMCSALKSRVNPHEN----PPPVAELFGKEHAESTQLLYDFSPCFSLGFMAANLAILEATMEQTTGNTIGSNKIHVIDFDIGQGGQYMNLFHALSARLNGKPAIVKVTAVADGTASEEK---LKAVRDKLSQVAERVGVCLRFNVAICLKFDDLSRDSLGCEPDETLAVNFAFKLFRMPDESVSTENPRDELLRRVKGLSPSVVTLVEQETNTNTAPFMARVNEACAYYGALFDSIESTVLRDHSDR 772 G+ QRL +M L++R+ + E G+E +LY+ P + + AN+ ILEA G ++H+IDF I QG QYM L L A+ G P +++VT V D ++ + L V ++L+ +A+ GV F+ AI + + R+ LG EP + VNF + L MPDESVS EN RD LL +K LSP +VTLVEQE+NTNT+PF++R E YY A+F+SI++ RD R Sbjct: 6 GSPIQRLGTYMAEGLRARLEGSGSNIYKSLKCNEPTGRELMSYMSVLYEICPYWKFAYTTANVEILEAIA--------GETRVHIIDFQIAQGSQYMFLIQEL-AKHPGGPPLLRVTGVDDSQSTYARGGGLSLVGERLATLAQSCGVPFEFHDAI-MSGCKVQREHLGLEPGFAVVVNFPYVLHHMPDESVSVENHRDRLLHLIKSLSPKLVTLVEQESNTNTSPFLSRFVETLDYYTAMFESIDAARPRDDKQR 251
BLAST of CN188892 vs. ExPASy Swiss-Prot
Match: CIGR2_ORYSJ (Chitin-inducible gibberellin-responsive protein 2 OS=Oryza sativa subsp. japonica GN=CIGR2 PE=2 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 6.165e-37 Identity = 92/210 (43.81%), Postives = 124/210 (59.05%), Query Frame = 2 Query: 152 LYDFSPCFSLGFMAANLAILEATMEQTTGNTIGSNKIHVIDFDIGQGGQYMNLFHALSARLNGKPAIVKVTAVADGTASEEK---LKAVRDKLSQVAERVGVCLRFNVAICLKFDDLSRDSLGCEPDETLAVNFAFKLFRMPDESVSTENPRDELLRRVKGLSPSVVTLVEQETNTNTAPFMARVNEACAYYGALFDSIESTVLRDHSDR 772 LY+ P F G+M+AN AI EA G ++IH+IDF I QG Q+++L AL+AR G P V++T + D ++ + L+ V +LS +A V F+ + + + LG P E LAVNF +L +PDESVST N RD LLR VK LSP V+TLVE E+NTNTAPF R E YY A+F+SI+ T+ RD +R Sbjct: 254 LYEACPYFKFGYMSANGAIAEAVK--------GEDRIHIIDFHISQGAQWISLLQALAARPGGPPT-VRITGIDDSVSAYARGGGLELVGRRLSHIASLCKVPFEFH-PLAISGSKVEAAHLGVIPGEALAVNFTLELHHIPDESVSTANHRDRLLRMVKSLSPKVLTLVEMESNTNTAPFPQRFAETLDYYTAIFESIDLTLPRDDRER 453
BLAST of CN188892 vs. ExPASy Swiss-Prot
Match: SCL4_ARATH (Scarecrow-like protein 4 OS=Arabidopsis thaliana GN=SCL4 PE=1 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 9.865e-27 Identity = 84/258 (32.56%), Postives = 131/258 (50.78%), Query Frame = 2 Query: 8 QATNSKGNSEQRLMEHMCSALKSRVNPHENPPPVAELFGKEHAESTQLLYDFSPCFSLGFMAANLAILEATMEQTTGNTIGSNKIHVIDFDIGQGGQYMNLFHALSARLNGKPAIVKVTAVAD---GTASEEKLKAVRDKLSQVAERVGVCLRFNVAICLKFDDLSRDSLGCEPDETLAVNFAFKLFRMPDESVSTENPRDELLRRVKGLSPSVVTLVEQETNTNTAPFMARVNEACAYYGALFDSIESTVLRDHSDR 772 ++ + G+ +R+ + AL +R++P+ + ++ S + L D P + AN AILEAT + SNKIH++DF I QG Q+ L AL+ R +GKP ++V+ + G + E L A ++L A+ + + F + I L+ S +PDE LAVNF +L+++ DE T D LR K L+P VVTL E E + N F RV A +Y A+F+S+E + RD +R Sbjct: 244 ESVSELGDPTERVAFYFTEALSNRLSPNSPATSSSSSSTEDLILSYKTLNDACPYSKFAHLTANQAILEATEK--------SNKIHIVDFGIVQGIQWPALLQALATRTSGKPTQIRVSGIPAPSLGESPEPSLIATGNRLRDFAKVLDLNFDF-IPILTPIHLLNGSSFRVDPDEVLAVNFMLQLYKLLDE---TPTIVDTALRLAKSLNPRVVTLGEYEVSLNRVGFANRVKNALQFYSAVFESLEPNLGRDSEER 489
BLAST of CN188892 vs. ExPASy Swiss-Prot
Match: GAI_SOLLC (DELLA protein GAI OS=Solanum lycopersicum GN=GAI PE=2 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 4.583e-24 Identity = 73/200 (36.50%), Postives = 101/200 (50.50%), Query Frame = 2 Query: 155 YDFSPCFSLGFMAANLAILEATMEQTTGNTIGSNKIHVIDFDIGQGGQYMNLFHALSARLNGKPAIVKVTAVADGTASEEKLKAVRDKLSQVAERVGVCLRFNVAICLKFDDLSRDSLGCEPDET--LAVNFAFKLFRMPDESVSTENPRDELLRRVKGLSPSVVTLVEQETNTNTAPFMARVNEACAYYGALFDSIEST 748 Y+ P AN AILEA G NK+HVIDF + QG Q+ L AL+ R G PA + + L+ V KL+Q+AE +GV F + DL L P ET +A+N F+L R+ +S +++L +K ++P +VTLVEQE N N F+ R NEA YY +FDS+ES+ Sbjct: 273 YETCPYLKFAHFTANQAILEAFT--------GCNKVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLAETIGVEFEFRGFVANSLADLDATILDIRPSETEAVAINSVFELHRL----LSRPGAIEKVLNSIKQINPKIVTLVEQEANHNAGVFIDRFNEALHYYSTMFDSLESS 460 The following BLAST results are available for this feature:
BLAST of CN188892 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 49
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188892 ID=CN188892; Name=CN188892; organism=Citrus sinensis; type=EST; length=773bpback to top |