CN182068

Overview
NameCN182068
Unique NameCN182068
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length676
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9906 contig Csv1_Contig9906:198..873. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN182068 vs. ExPASy Swiss-Prot
Match: COMT1_POPKI (Caffeic acid 3-O-methyltransferase 1 OS=Populus kitakamiensis GN=HOMT1 PE=3 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 4.276e-49
Identity = 106/224 (47.32%), Postives = 143/224 (63.84%), Query Frame = 2
Query:   17 MGSFTKSKSKVTN-EEEEVYSHAMVLGSAIVLPAVFQAVVNLDVLDIINKAGPGAELSASEIASQIPTKNPEGAAKMLDRVLGLLVSFNILCCSFST----HGVRLYSLAPVAKYYVSDQNGVSMRPYMNLSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXSKYP 673
            MGS  +++   T   +EE +  AM L SA VLP + +  + LD+L+I+ KAGPGA LS SEIAS +PTKNP+ A  MLDR+L LL S++IL CS          RLY LAPV K+   +++GVS+ P   ++ DKV+M  W+ LKD ILEG + +NKA GM  ++Y GTD RFN+VFN GM   ++  + KI+E+YKGF+ +T LVDV            SKYP
Sbjct:    1 MGSTGETQMTPTQVSDEEAHLFAMQLASASVLPMILKTAIELDLLEIMAKAGPGAFLSTSEIASHLPTKNPD-APVMLDRILRLLASYSILTCSLKDLPDGKVERLYGLAPVCKFLTKNEDGVSVSPLCLMNQDKVLMESWYYLKDAILEGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSTITMKKILETYKGFEGLTSLVDVGGGTGAVVNTIVSKYP 223          
BLAST of CN182068 vs. ExPASy Swiss-Prot
Match: COMT1_POPTM (Caffeic acid 3-O-methyltransferase 1 OS=Populus tremuloides GN=OMT1 PE=1 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 9.526e-49
Identity = 105/224 (46.88%), Postives = 143/224 (63.84%), Query Frame = 2
Query:   17 MGSFTKSKSKVTN-EEEEVYSHAMVLGSAIVLPAVFQAVVNLDVLDIINKAGPGAELSASEIASQIPTKNPEGAAKMLDRVLGLLVSFNILCCSFST----HGVRLYSLAPVAKYYVSDQNGVSMRPYMNLSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXSKYP 673
            MGS  +++   T   +EE +  AM L SA VLP + +  + LD+L+I+ KAGPGA LS SEIAS +PTKNP+ A  MLDR+L LL S++IL CS          RLY LAPV K+   +++GVS+ P   ++ DKV+M  W+ LKD IL+G + +NKA GM  ++Y GTD RFN+VFN GM   ++  + KI+E+YKGF+ +T LVDV            SKYP
Sbjct:    1 MGSTGETQMTPTQVSDEEAHLFAMQLASASVLPMILKTAIELDLLEIMAKAGPGAFLSTSEIASHLPTKNPD-APVMLDRILRLLASYSILTCSLKDLPDGKVERLYGLAPVCKFLTKNEDGVSVSPLCLMNQDKVLMESWYYLKDAILDGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSTITMKKILETYKGFEGLTSLVDVGGGTGAVVNTIVSKYP 223          
BLAST of CN182068 vs. ExPASy Swiss-Prot
Match: COMT1_CATRO (Caffeic acid 3-O-methyltransferase OS=Catharanthus roseus GN=COMT1 PE=2 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 3.620e-48
Identity = 99/217 (45.62%), Postives = 144/217 (66.36%), Query Frame = 2
Query:   35 SKSKVTNEEEEVYSHAMVLGSAIVLPAVFQAVVNLDVLDIINKAGPGAELSASEIASQIPTKNPEGAAKMLDRVLGLLVSFNILCCSFST---HGV-RLYSLAPVAKYYVSDQNGVSMRPYMNLSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXSKYP 673
            +K+ +T EEEE    AM L SA VLP V ++ + LD+L++I K+GPGA +S SE+A+Q+PT+NP+ A  MLDR+L LL S+++L C+       G+ RLYSLAPV K+   +++GVSM   + ++ DKV+M  W+ LKD +LEG + +NKA GM  ++Y G D RFN+VFN GM   ++ ++ KI+E Y+GFQ +  +VDV            SKYP
Sbjct:    8 NKNSMTKEEEEACLSAMRLASASVLPMVLKSAIELDLLELIKKSGPGAYVSPSELAAQLPTQNPD-APVMLDRILRLLASYSVLNCTLKDLPDGGIERLYSLAPVCKFLTKNEDGVSMAALLLMNQDKVLMESWYHLKDAVLEGGIPFNKAYGMTAFEYHGKDPRFNKVFNQGMSNHSTIIMKKILEIYQGFQGLKTVVDVGGGTGATLNMIVSKYP 223          
BLAST of CN182068 vs. ExPASy Swiss-Prot
Match: COMT1_CAPAN (Caffeic acid 3-O-methyltransferase OS=Capsicum annuum GN=COMT PE=2 SV=2)

HSP 1 Score: 187.963 bits (476), Expect = 4.002e-47
Identity = 97/217 (44.70%), Postives = 139/217 (64.06%), Query Frame = 2
Query:   35 SKSKVTNEEEEVYSHAMVLGSAIVLPAVFQAVVNLDVLDIINKAGPGAELSASEIASQIPTKNPEGAAKMLDRVLGLLVSFNILCCSFST----HGVRLYSLAPVAKYYVSDQNGVSMRPYMNLSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXSKYP 673
            +   +T  E+E +  AM L SA VLP V ++ + LD+L+I+ KAGPGA +S SE+A+Q+PTKNPE A  MLDR+L LL ++++L C+  T       RLYSLAPV K    + +GVS+ P + ++ DKV+M  W+ L D +L+G + +NKA GM  ++Y GTD RFN+VFN GM   ++  + KI+E YKGF+ +  +VDV            SKYP
Sbjct:    4 TNQNLTQTEDEAFLFAMQLASASVLPMVLKSALELDLLEIMAKAGPGAAISPSELAAQLPTKNPE-APVMLDRMLRLLATYSVLNCTLRTLPDGRVERLYSLAPVCKLLTKNADGVSVAPLLLMNQDKVLMESWYHLTDAVLDGGVPFNKAYGMTAFEYHGTDPRFNKVFNRGMSDHSTMTMKKILEDYKGFEGLNSIVDVGGGTGATVNMIVSKYP 219          
BLAST of CN182068 vs. ExPASy Swiss-Prot
Match: COMT1_CAPCH (Caffeic acid 3-O-methyltransferase OS=Capsicum chinense GN=COMT PE=2 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 6.826e-47
Identity = 101/223 (45.29%), Postives = 142/223 (63.68%), Query Frame = 2
Query:   17 MGSFTKSKSKVTNEEEEVYSHAMVLGSAIVLPAVFQAVVNLDVLDIINKAGPGAELSASEIASQIPTKNPEGAAKMLDRVLGLLVSFNILCCSFST----HGVRLYSLAPVAKYYVSDQNGVSMRPYMNLSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXSKYP 673
            MGS  +S   +T  E+E +  AM L SA VLP V +A V LD+L+I+ K+GPGA +S SE+A+Q+PTKNPE A  MLDR+  LL ++++L C+  T       RLYSLAPV K+   + +GVS+ P + ++ DKV+M  W+ L D +L+G + +NKA GM  ++Y GTD RFN+VFN GM   T+  + KI+E Y GF+ +  +VDV            SKYP
Sbjct:    1 MGSINQS---LTQTEDEAFVFAMQLASASVLPMVLKATVELDLLEIMAKSGPGAFISPSELAAQLPTKNPE-APVMLDRMFRLLATYSVLNCTLRTLPDGRVERLYSLAPVCKFLTKNGDGVSIAPILLMNQDKVLMESWYHLTDAVLDGGVPFNKAYGMTTFEYHGTDPRFNKVFNCGMSDHTTLSMKKILEDYTGFEGLNSIVDVGGGTGATVNMIVSKYP 219          
BLAST of CN182068 vs. ExPASy Swiss-Prot
Match: COMT1_PRUDU (Caffeic acid 3-O-methyltransferase OS=Prunus dulcis GN=COMT1 PE=2 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 1.521e-46
Identity = 100/222 (45.05%), Postives = 142/222 (63.96%), Query Frame = 2
Query:   20 GSFTKSKSKVTNEEEEVYSHAMVLGSAIVLPAVFQAVVNLDVLDIINKAGPGAELSASEIASQIPTKNPEGAAKMLDRVLGLLVSFNILCCSFSTHG----VRLYSLAPVAKYYVSDQNGVSMRPYMNLSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXSKYP 673
            G    + ++V++EE  ++  AM L SA VLP V +A + LD+L+I+ KAGPG  LS ++IASQ+PTKNP+ A  MLDR+L LL S++IL  S  T       RLY L PV K+   ++ GVS+ P   ++ DKV++  W+ LKD +LEG + +NKA GM  ++Y GTD RFN+VFN GM   ++  + KI+E+YKGF+ +T +VDV            SKYP
Sbjct:    5 GETQMTPTQVSDEEANLF--AMQLASASVLPMVLKAAIELDLLEIMAKAGPGVFLSPTDIASQLPTKNPD-APVMLDRMLRLLASYSILTYSLRTLADGKVERLYGLGPVCKFLTKNEEGVSIAPLCLMNQDKVLLESWYHLKDAVLEGGIPFNKAYGMTAFEYHGTDPRFNKVFNRGMADHSTITMKKILETYKGFEGLTSVVDVGGGTGAVLNMIVSKYP 223          
BLAST of CN182068 vs. ExPASy Swiss-Prot
Match: COMT1_ROSCH (Caffeic acid 3-O-methyltransferase OS=Rosa chinensis GN=COMT1 PE=2 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 2.594e-46
Identity = 100/222 (45.05%), Postives = 143/222 (64.41%), Query Frame = 2
Query:   20 GSFTKSKSKVTNEEEEVYSHAMVLGSAIVLPAVFQAVVNLDVLDIINKAGPGAELSASEIASQIPTKNPEGAAKMLDRVLGLLVSFNILCCSFST----HGVRLYSLAPVAKYYVSDQNGVSMRPYMNLSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXSKYP 673
            G    + ++V++EE  ++  AM L SA VLP V +A + LD+L+I+ KAGPGA LS +++ASQ+PTKNPE A  MLDR+L LL S++IL  S  T       RLY L PV K+   +++GVS+     ++ DKV++  W+ LKD +L+G + +NKA GM  +DY GTD RFN+VFN GM   ++  + KI+E+YKGF+ +T +VDV            SKYP
Sbjct:    5 GETQMTPTQVSDEEANLF--AMQLASASVLPMVLKAAIELDLLEIMAKAGPGAFLSPNDLASQLPTKNPE-APVMLDRMLRLLASYSILTYSLRTLPDGKVERLYGLGPVCKFLTKNEDGVSIAALCLMNQDKVLVESWYHLKDAVLDGGIPFNKAYGMTAFDYHGTDPRFNKVFNKGMADHSTITMKKILETYKGFEGLTSIVDVGGGTGAVVNMIVSKYP 223          
BLAST of CN182068 vs. ExPASy Swiss-Prot
Match: COMT1_COFCA (Caffeic acid 3-O-methyltransferase OS=Coffea canephora PE=2 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 4.425e-46
Identity = 97/209 (46.41%), Postives = 136/209 (65.07%), Query Frame = 2
Query:   59 EEEVYSHAMVLGSAIVLPAVFQAVVNLDVLDIINKAGPGAELSASEIASQIPTKNPEGAAKMLDRVLGLLVSFNILCCSFST---HGV-RLYSLAPVAKYYVSDQNGVSMRPYMNLSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXSKYP 673
            EEE    AM L SA VLP V ++ + LD+L++I KAGPGA +S SE+A+Q+PT NPE A  MLDR+L LL ++++L C  +     GV RLY LAPV K+   + +GVSM P + ++ DKV+M  W+ LKD +L+G + +NKA GM  ++Y GTD RFN+VFN GM   ++  + KI+E Y+GF+ +  +VDV            SKYP
Sbjct:    3 EEEACLFAMSLASASVLPMVLKSAIELDLLELIAKAGPGAYVSPSELAAQLPTHNPE-APIMLDRILRLLATYSVLDCKLNNLADGGVERLYGLAPVCKFLTKNADGVSMAPLLLMNQDKVLMESWYHLKDAVLDGGIPFNKAYGMTAFEYHGTDPRFNKVFNQGMSNHSTITMKKILEVYRGFEGLKTVVDVGGGTGATLNMIISKYP 210          
BLAST of CN182068 vs. ExPASy Swiss-Prot
Match: COMT3_POPKI (Caffeic acid 3-O-methyltransferase 3 OS=Populus kitakamiensis GN=HOMT3 PE=3 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 5.779e-46
Identity = 102/223 (45.74%), Postives = 138/223 (61.88%), Query Frame = 2
Query:   17 MGSFTKSKSKVTNEEEEVYSHAMVLGSAIVLPAVFQAVVNLDVLDIINKAGPGAELSASEIASQIPTKNPEGAAKMLDRVLGLLVSFNILCCSFST----HGVRLYSLAPVAKYYVSDQNGVSMRPYMNLSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXSKYP 673
            MGS  +++       +E  + AM L S+ VLP V +  + LD+L+I+ KAGPGA LS S+IAS +PTKNP+ A  MLDR+L LL S++IL CS          RLY LA V K+   +++GVS+ P   ++ DKV+M  W+ LKD ILEG + +NKA GM  ++Y GTD RFN+VFN GM   +   + KI+ESYKGF+ +  LVDV            SKYP
Sbjct:    1 MGSTGETQMSPAQILDEEANFAMQLISSSVLPMVLKTAIELDLLEIMAKAGPGALLSPSDIASHLPTKNPD-APVMLDRILRLLASYSILICSLRDLPDGKVERLYGLASVCKFLTKNEDGVSVSPLCLMNQDKVLMESWYHLKDAILEGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSKMAMKKILESYKGFEGLASLVDVGGGTGAVVSTIVSKYP 222          
BLAST of CN182068 vs. ExPASy Swiss-Prot
Match: COMT1_MEDSA (Caffeic acid 3-O-methyltransferase OS=Medicago sativa PE=1 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 2.196e-45
Identity = 102/224 (45.54%), Postives = 141/224 (62.95%), Query Frame = 2
Query:   17 MGSFTKSKSKVTN-EEEEVYSHAMVLGSAIVLPAVFQAVVNLDVLDIINKAGPGAELSASEIASQIPTKNPEGAAKMLDRVLGLLVSFNILCCSFSTHG----VRLYSLAPVAKYYVSDQNGVSMRPYMNLSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXSKYP 673
            MGS  +++   T+  +EE    AM L SA VLP + ++ + LD+L+II KAGPGA++S  EIASQ+PT NP+ A  MLDR+L LL  + IL CS  T       RLY LA VAKY V +++GVS+     ++ DKV+M  W+ LKD +L+G + +NKA GM  ++Y GTD RFN+VFN GM   ++  + KI+E+Y GF+ +  LVDV            SKYP
Sbjct:    1 MGSTGETQITPTHISDEEANLFAMQLASASVLPMILKSALELDLLEIIAKAGPGAQISPIEIASQLPTTNPD-APVMLDRMLRLLACYIILTCSVRTQQDGKVQRLYGLATVAKYLVKNEDGVSISALNLMNQDKVLMESWYHLKDAVLDGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSTITMKKILETYTGFEGLKSLVDVGGGTGAVINTIVSKYP 223          
The following BLAST results are available for this feature:
BLAST of CN182068 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
COMT1_POPKI4.276e-4947.32Caffeic acid 3-O-methyltransferase 1 OS=Populus ki... [more]
COMT1_POPTM9.526e-4946.88Caffeic acid 3-O-methyltransferase 1 OS=Populus tr... [more]
COMT1_CATRO3.620e-4845.62Caffeic acid 3-O-methyltransferase OS=Catharanthus... [more]
COMT1_CAPAN4.002e-4744.70Caffeic acid 3-O-methyltransferase OS=Capsicum ann... [more]
COMT1_CAPCH6.826e-4745.29Caffeic acid 3-O-methyltransferase OS=Capsicum chi... [more]
COMT1_PRUDU1.521e-4645.05Caffeic acid 3-O-methyltransferase OS=Prunus dulci... [more]
COMT1_ROSCH2.594e-4645.05Caffeic acid 3-O-methyltransferase OS=Rosa chinens... [more]
COMT1_COFCA4.425e-4646.41Caffeic acid 3-O-methyltransferase OS=Coffea canep... [more]
COMT3_POPKI5.779e-4645.74Caffeic acid 3-O-methyltransferase 3 OS=Populus ki... [more]
COMT1_MEDSA2.196e-4545.54Caffeic acid 3-O-methyltransferase OS=Medicago sat... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001O13_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001O13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN182068 ID=CN182068; Name=CN182068; organism=Citrus sinensis; type=EST; length=676bp
GAAATTAAACGCGCAAATGGGTTCTTTCACTAAGAGCAAATCAAAAGTGA
CCAATGAAGAGGAAGAGGTATATTCACATGCCATGGTACTGGGAAGTGCA
ATAGTGCTACCCGCGGTTTTTCAAGCAGTAGTAAATCTTGATGTTCTTGA
TATCATAAACAAAGCTGGTCCTGGTGCTGAGCTTTCTGCTTCAGAGATTG
CTTCTCAAATTCCCACCAAAAATCCTGAGGGTGCTGCCAAGATGTTGGAT
CGGGTTCTCGGGCTTCTGGTGAGCTTCAATATCCTTTGTTGCTCTTTCAG
TACTCATGGAGTAAGGCTCTACAGTCTCGCTCCTGTCGCTAAATACTATG
TGAGTGATCAAAACGGCGTCTCAATGCGTCCCTATATGAACTTGTCTCTT
GACAAAGTAATGATGCCTGGCTGGTTCCAATTGAAAGACCAAATTCTTGA
AGGAGAACTTTCGTATAATAAAGCCCTCGGAATGGATTTCTACGATTATC
TGGGCACCGACTCCAGGTTCAATGAAGTTTTCAACAATGGAATGATCGGC
CAGACTTCTTTTGTAATCAATAAGATTGTAGAATCCTACAAAGGCTTTCA
GAATATTACGCGCCTTGTTGACGTTGGCGGTGGTTTAGGAATCACCCTTG
CGACCATAATTTCCAAATACCCTCAT
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