CN182019

Overview
NameCN182019
Unique NameCN182019
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length703
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN182019 vs. ExPASy Swiss-Prot
Match: PLA1_PLAAC (Putative invertase inhibitor OS=Platanus acerifolia PE=1 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.938e-23
Identity = 64/176 (36.36%), Postives = 95/176 (53.98%), Query Frame = 3
Query:   33 SVCLFVPLLVISLLPCKNTEASNDLITTTCEKTMYK------ELCIASLRSDKDSSGSDLQGLGKISLKITLADANEIQGYISELLKKDGKPFLQQCLKDCSENLQDAILEIKDSIAAIDSRSYGDVNTWVSAAMSYEESCEDGFKEKPGFKSPLTQMNAKFSQLCGISLTISNLL 542
            S+C+F      +LL       S D++  TC+K   +      + C+ SL +D  S  +DLQGLG IS  + +   ++IQ +I  +LK    P L++ L DC     DA   ++++IA   S+ Y   N  +SAA+    +CEDGFKEK G  SP+T+ N  + QL  ISL I+ LL
Sbjct:    6 SLCIFF----FNLLLLLQAVISADIVQGTCKKVAQRSPNVNYDFCVKSLGADPKSHTADLQGLGVISANLAIQHGSKIQTFIGRILKSKVDPALKKYLNDCVGLYADAKSSVQEAIADFKSKDYASANVKMSAALDDSVTCEDGFKEKKGIVSPVTKENKDYVQLTAISLAITKLL 177          
BLAST of CN182019 vs. ExPASy Swiss-Prot
Match: PMEI_ACTDE (Pectinesterase inhibitor OS=Actinidia deliciosa GN=PMEI PE=1 SV=2)

HSP 1 Score: 103.219 bits (256), Expect = 1.389e-21
Identity = 64/177 (36.16%), Postives = 89/177 (50.28%), Query Frame = 3
Query:   33 SVCLFVPLLVISLLPCK-----NTEASNDLITTTCEKTMYKELCIASLRSDKDSSGSDLQGLGKISLKITLADANEIQGYISELLKKDGKPFLQQCLKDCSENLQDAILEIKDSIAAIDSRSYGDVNTWVSAAMSYEESCEDGFKEKPGFKSPLTQMNAKFSQLCGISLTISNLLAG 548
            S  LFV LL++ L         + +A N LI+  C KT    LC+ +L SD  S+  DL+GLG+ S+ I  A A +    I+ L  +   P L+   + CSEN  DAI  +  +   + S  Y  +N + SAA     +CED F+  P   + L Q + K   LC I L ISNLL G
Sbjct:    7 SSSLFVSLLLVILFISPLSQRPSVKAENHLISEICPKTRNPSLCLQALESDPRSASKDLKGLGQFSIDIAQASAKQTSKIIASLTNQATDPKLKGRYETCSENYADAIDSLGQAKQFLTSGDYNSLNIYASAAFDGAGTCEDSFEGPPNIPTQLHQADLKLEDLCDIVLVISNLLPG 183          
The following BLAST results are available for this feature:
BLAST of CN182019 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
PLA1_PLAAC1.938e-2336.36Putative invertase inhibitor OS=Platanus acerifoli... [more]
PMEI_ACTDE1.389e-2136.16Pectinesterase inhibitor OS=Actinidia deliciosa GN... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS04_0001N07_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001N07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN182019 ID=CN182019; Name=CN182019; organism=Citrus sinensis; type=EST; length=703bp
CCCCGGGCTGCAGGAAAACCATGAAGAGAATCTCAGTATGCCTCTTTGTT
CCTCTTCTGGTTATCTCCCTATTGCCCTGCAAAAACACTGAAGCAAGTAA
TGATTTAATCACAACAACTTGTGAAAAAACAATGTACAAGGAACTCTGCA
TAGCTTCTTTAAGATCAGACAAGGACAGCAGCGGGTCTGACCTCCAAGGC
CTTGGCAAAATTTCTTTAAAAATTACGTTGGCCGATGCCAATGAAATTCA
GGGTTATATTTCAGAGTTGCTAAAGAAAGATGGGAAGCCATTTCTTCAAC
AATGCTTGAAGGATTGTTCCGAAAATTTACAGGATGCGATTTTGGAGATT
AAAGACTCGATAGCAGCTATCGATTCTAGGAGTTACGGTGATGTTAATAC
ATGGGTCAGTGCTGCTATGAGCTATGAAGAATCCTGCGAAGATGGTTTCA
AGGAAAAACCAGGCTTCAAATCTCCATTAACTCAGATGAATGCAAAATTT
AGTCAGCTCTGTGGTATTTCTTTAACCATTAGCAATCTCTTGGCTGGCAA
AGCATAACATCCTTTTTTTTTTTCAGTTTTTATAAGGACATTTTTATTTT
AAGATTTCGGTTCAATTTCGCTTCTCTGAAAGTAAAATTTTAAGACTTAC
AAAAAGAATGTACAGTCTAAAATTTTAAGACTTACAAAAAGAATGTACAG
TCT
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