CX044140
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX044140 vs. ExPASy Swiss-Prot
Match: RUXG_ARATH (Probable small nuclear ribonucleoprotein G OS=Arabidopsis thaliana GN=At2g23930 PE=2 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 1.144e-35 Identity = 71/79 (89.87%), Postives = 76/79 (96.20%), Query Frame = 1 Query: 52 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDIGMVVIRGNSVVTVEALEPVSKS 288 MSRSGQPPDLKKYMDKKLQIKLNANRM+ GTLRGFDQFMNLV+DNTVEVNGN+K DIGMVVIRGNS+VTVEALEPV +S Sbjct: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMVTGTLRGFDQFMNLVVDNTVEVNGNDKTDIGMVVIRGNSIVTVEALEPVGRS 79
BLAST of CX044140 vs. ExPASy Swiss-Prot
Match: RUXG_MEDSA (Probable small nuclear ribonucleoprotein G OS=Medicago sativa GN=C29 PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 2.386e-33 Identity = 70/76 (92.11%), Postives = 72/76 (94.74%), Query Frame = 1 Query: 52 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDIGMVVIRGNSVVTVEALEPV 279 MS SGQPP LKKYMDK+LQI L ANRMIVGTLRGFDQFMNLV+DNTVEVNGNEKNDIGMVVIRGNSVVTVEALEPV Sbjct: 1 MSTSGQPPALKKYMDKQLQINLKANRMIVGTLRGFDQFMNLVVDNTVEVNGNEKNDIGMVVIRGNSVVTVEALEPV 76
BLAST of CX044140 vs. ExPASy Swiss-Prot
Match: RUXG_DROME (Probable small nuclear ribonucleoprotein G OS=Drosophila melanogaster GN=SmG PE=1 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 2.561e-19 Identity = 45/71 (63.38%), Postives = 57/71 (80.28%), Query Frame = 1 Query: 70 PPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTV-EVNGNEKNDIGMVVIRGNSVVTVEALEPV 279 PP++KKYMDK++ +KLN R + G LRGFD FMN+V+D+TV E N KN+IGMVVIRGNS+V VEAL+ V Sbjct: 6 PPEVKKYMDKRMMLKLNGGRAVTGILRGFDPFMNVVLDDTVEECKDNTKNNIGMVVIRGNSIVMVEALDRV 76
BLAST of CX044140 vs. ExPASy Swiss-Prot
Match: RUXG_MOUSE (Small nuclear ribonucleoprotein G OS=Mus musculus GN=Snrpg PE=1 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 1.271e-18 Identity = 45/71 (63.38%), Postives = 56/71 (78.87%), Query Frame = 1 Query: 70 PPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV-NGNEKNDIGMVVIRGNSVVTVEALEPV 279 PP+LKK+MDKKL +KLN R + G LRGFD FMNLVID VE+ ++N+IGMVVIRGNS++ +EALE V Sbjct: 6 PPELKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVEMATSGQQNNIGMVVIRGNSIIMLEALERV 76
BLAST of CX044140 vs. ExPASy Swiss-Prot
Match: RUXG_HUMAN (Small nuclear ribonucleoprotein G OS=Homo sapiens GN=SNRPG PE=1 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 1.271e-18 Identity = 45/71 (63.38%), Postives = 56/71 (78.87%), Query Frame = 1 Query: 70 PPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV-NGNEKNDIGMVVIRGNSVVTVEALEPV 279 PP+LKK+MDKKL +KLN R + G LRGFD FMNLVID VE+ ++N+IGMVVIRGNS++ +EALE V Sbjct: 6 PPELKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVEMATSGQQNNIGMVVIRGNSIIMLEALERV 76
BLAST of CX044140 vs. ExPASy Swiss-Prot
Match: RUXG_BOVIN (Small nuclear ribonucleoprotein G OS=Bos taurus GN=SNRPG PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 1.271e-18 Identity = 45/71 (63.38%), Postives = 56/71 (78.87%), Query Frame = 1 Query: 70 PPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV-NGNEKNDIGMVVIRGNSVVTVEALEPV 279 PP+LKK+MDKKL +KLN R + G LRGFD FMNLVID VE+ ++N+IGMVVIRGNS++ +EALE V Sbjct: 6 PPELKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVEMATSGQQNNIGMVVIRGNSIIMLEALERV 76
BLAST of CX044140 vs. ExPASy Swiss-Prot
Match: RUXGL_HUMAN (Small nuclear ribonucleoprotein G-like protein OS=Homo sapiens PE=3 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 2.029e-16 Identity = 44/72 (61.11%), Postives = 54/72 (75.00%), Query Frame = 1 Query: 70 PPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV--NGNEKNDIGMVVIRGNSVVTVEALEPV 279 PP+LKK+ DKK +KLN R + G LRGFD FMNLVID VE+ +G +KN IGMV IRGNS++ +EALE V Sbjct: 6 PPELKKFTDKKFSLKLNGGRHVQGILRGFDPFMNLVIDECVEMATSGQQKN-IGMVEIRGNSIIMLEALERV 76
BLAST of CX044140 vs. ExPASy Swiss-Prot
Match: RUXG_CAEEL (Probable small nuclear ribonucleoprotein G OS=Caenorhabditis elegans GN=snr-7 PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 4.520e-16 Identity = 43/73 (58.90%), Postives = 53/73 (72.60%), Query Frame = 1 Query: 70 PPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV--NGNEKNDIGMVVIRGNSVVTVEALEPVS 282 PP+LKKYMDK++ +KLN NR + G LRGFD FMN+VID VE +G N +GM VIRGNSVV +E E +S Sbjct: 6 PPELKKYMDKEMDLKLNGNRRVSGILRGFDPFMNMVIDEAVEYQKDGGSVN-LGMTVIRGNSVVIMEPKERIS 77
BLAST of CX044140 vs. ExPASy Swiss-Prot
Match: RUXG_DICDI (Probable small nuclear ribonucleoprotein G OS=Dictyostelium discoideum GN=snrpG PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 7.710e-16 Identity = 41/71 (57.75%), Postives = 54/71 (76.06%), Query Frame = 1 Query: 73 PDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE-VNGNEKNDIGMVVIRGNSVVTVEALEPVS 282 PDL K +DKKL IKLN NR + G LRGFD FMN+ + +TVE V+ EK +IGMV+IRGNS++ +E LE ++ Sbjct: 9 PDLTKLLDKKLAIKLNGNRTVHGILRGFDTFMNIALKDTVEVVSPTEKYEIGMVIIRGNSILLMEPLESMA 79
BLAST of CX044140 vs. ExPASy Swiss-Prot
Match: RUXG_YEAST (Small nuclear ribonucleoprotein G OS=Saccharomyces cerevisiae GN=SMX2 PE=1 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 7.216e-14 Identity = 33/73 (45.21%), Postives = 56/73 (76.71%), Query Frame = 1 Query: 73 PDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNE---KNDIGM-VVIRGNSVVTVEALEPV 279 P+LKKYMDKK+ + +N +R + G LRG+D F+N+V+D+ +E+NG + + +G+ VIRGNS++++EAL+ + Sbjct: 5 PELKKYMDKKILLNINGSRKVAGILRGYDIFLNVVLDDAMEINGEDPANNHQLGLQTVIRGNSIISLEALDAI 77 The following BLAST results are available for this feature:
BLAST of CX044140 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
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Sequences
The
following sequences are available for this feature:
EST sequence >CX044140 ID=CX044140; Name=CX044140; organism=Citrus sinensis; type=EST; length=414bpback to top |