CN188763
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN188763 vs. ExPASy Swiss-Prot
Match: 21KD_DAUCA (21 kDa protein OS=Daucus carota PE=2 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 5.298e-41 Identity = 85/171 (49.71%), Postives = 115/171 (67.25%), Query Frame = 2 Query: 104 STPAN-FIRNSCRATRYPALCVQCLSGYGHAIRNEHQ-LAVTXXXXXXXXXXXXXXFVGKLTKVRGIKKREFLAVKDCIENMGDGVDRLSQSVRELGHVGRAVGQDFTWHMSNVQTWVSAALTDENTCLDGFDGRFMDGNVKAAIRRRVTNVAQVTSNALALVNRFAARHQ 610 + PAN FI+ SC T YPA+C Q LS Y I+N Q LA T F+ +L K +G+K R++ A+ DC+E + D +DR+S+S E+ ++ A G DFT+ MSNV+TWVSAALTDE TC+DGF G+ MDG +K ++R +V VA+VTSNALALVN FAA+H+ Sbjct: 22 AAPANQFIKTSCTLTTYPAVCEQSLSAYAKTIQNNPQELASTALQVSLTRTQQAQTFMKRLNKFKGLKARQYAAIHDCLEEVEDSLDRVSRSCDEMKNLSHAKGNDFTFRMSNVETWVSAALTDETTCMDGFAGKGMDGKIKESVRAQVVAVARVTSNALALVNNFAAKHK 192
BLAST of CN188763 vs. ExPASy Swiss-Prot
Match: PME3_ARATH (Pectinesterase/pectinesterase inhibitor 3 OS=Arabidopsis thaliana GN=PME3 PE=2 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 6.103e-13 Identity = 47/157 (29.94%), Postives = 83/157 (52.87%), Query Frame = 2 Query: 122 IRNSCRATRYPALCVQCL-SGYGHAIRNEHQLAVTXXXXXXXXXXXXXXFVGKLTKVR-GIKKREFLAVKDCIENMGDGVDRLSQSVRELGHVGRAVGQDFTWHMSNVQTWVSAALTDENTCLDGFDGRFMDGNVKAAIRRRVTNVAQVTSNALALV 586 +R+SC +TRYP LC+ + + G + ++ + V KL K R G+ RE A+ DC+E + + +D L ++V +L H+ + H +++T +S+A+T++ TCLDGF D V+ A+ + +V + SNALA++ Sbjct: 59 LRSSCSSTRYPELCISAVVTAGGVELTSQKDVIEASVNLTITAVEHNYFTVKKLIKKRKGLTPREKTALHDCLETIDETLDELHETVEDL-HL-YPTKKTLREHAGDLKTLISSAITNQETCLDGFSHDDADKQVRKALLKGQIHVEHMCSNALAMI 213
BLAST of CN188763 vs. ExPASy Swiss-Prot
Match: PME3_CITSI (Pectinesterase 3 OS=Citrus sinensis PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.360e-12 Identity = 46/158 (29.11%), Postives = 82/158 (51.90%), Query Frame = 2 Query: 122 IRNSCRATRYPALCVQCLSGYGHAIRN-EHQLAVTXXXXXXXXXXXXXXFVG--KLTKVRGIKKREFLAVKDCIENMGDGVDRLSQSVRELGHVGRAVGQDFTWHMSNVQTWVSAALTDENTCLDGFDGRFMDGNVKAAIRRRVTNVAQVTSNALALV 586 +++SC +TRYP LC ++ A + Q V + G KL K + KRE +A+ DC+E + + +D L ++V +L + + H +++T +SAA+T++ TCLDGF + +V+ A+ +V ++ SNALA++ Sbjct: 69 LKSSCSSTRYPDLCFSAIAAVPEASKKVTSQKDVIEMSLNITTTAVEHNYFGIQKLLKRTNLTKREKVALHDCLETIDETLDELHKAVEDLEEYPNK--KSLSQHADDLKTLMSAAMTNQGTCLDGFSHDDANKHVRDALSDGQVHVEKMCSNALAMI 224
BLAST of CN188763 vs. ExPASy Swiss-Prot
Match: PME1_CITSI (Pectinesterase 1 OS=Citrus sinensis GN=PECS-1.1 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.360e-12 Identity = 46/158 (29.11%), Postives = 82/158 (51.90%), Query Frame = 2 Query: 122 IRNSCRATRYPALCVQCLSGYGHAIRN-EHQLAVTXXXXXXXXXXXXXXFVG--KLTKVRGIKKREFLAVKDCIENMGDGVDRLSQSVRELGHVGRAVGQDFTWHMSNVQTWVSAALTDENTCLDGFDGRFMDGNVKAAIRRRVTNVAQVTSNALALV 586 +++SC +TRYP LC ++ A + Q V + G KL K + KRE +A+ DC+E + + +D L ++V +L + + H +++T +SAA+T++ TCLDGF + +V+ A+ +V ++ SNALA++ Sbjct: 69 LKSSCSSTRYPDLCFSAIAAVPEASKKVTSQKDVIEMSLNITTTAVEHNYFGIQKLLKRTNLTKREKVALHDCLETIDETLDELHKAVEDLEEYPNK--KSLSQHADDLKTLMSAAMTNQGTCLDGFSHDDANKHVRDALSDGQVHVEKMCSNALAMI 224
BLAST of CN188763 vs. ExPASy Swiss-Prot
Match: PME2_ARATH (Pectinesterase 2 OS=Arabidopsis thaliana GN=PME2 PE=2 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 6.748e-12 Identity = 43/163 (26.38%), Postives = 78/163 (47.85%), Query Frame = 2 Query: 104 STPANFIRNSCRATRYPALCVQCLSGYGHAIRNEHQLAVTXXXXXXXXXXXXXXFVGK--LTKVRGIKKREFLAVKDCIENMGDGVDRLSQSVRELGHVGRAVGQDFTWHMSNVQTWVSAALTDENTCLDGFDGRFMDGNVKAAIRRRVTNVAQVTSNALALV 586 ST +++ C +T YP LC ++ G + + F K + K +G+ RE A+ DC+E + + +D L +V +L + + H +++T +S+A+T++ TCLDGF D V+ A+ + +V + SNALA++ Sbjct: 56 STSHAILKSVCSSTLYPELCFSAVAATGGKELTSQKEVIEASLNLTTKAVKHNYFAVKKLIAKRKGLTPREVTALHDCLETIDETLDELHVAVEDLHQYPKQ--KSLRKHADDLKTLISSAITNQGTCLDGFSYDDADRKVRKALLKGQVHVEHMCSNALAMI 216 The following BLAST results are available for this feature:
BLAST of CN188763 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN188763 ID=CN188763; Name=CN188763; organism=Citrus sinensis; type=EST; length=658bpback to top |