CN181748
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN181748 vs. ExPASy Swiss-Prot
Match: CCS_RAT (Copper chaperone for superoxide dismutase OS=Rattus norvegicus GN=Ccs PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.943e-12 Identity = 47/111 (42.34%), Postives = 64/111 (57.66%), Query Frame = 2 Query: 359 TSQGDQGLPELLTEYMVDMKCEGCVDAVKQKLQTVTGVKNVEVDLSNQVVRILGSSPLKTMTEALEQTGRKARLVGQGVPEDFLVSAAVAEFKGP-DVFGVVRLAQVNMEL 688 + GD G L E+ V M C+ CVDAV + L+ GV+NVEV L NQ+V + + P + + LE TGR+A L G G + + AAVA +G V GVVR Q++ EL Sbjct: 3 SKSGDGGTMCAL-EFTVQMSCQSCVDAVHKTLKGAAGVQNVEVQLENQMVLVQTTLPSQEVQALLESTGRQAVLKGMGSSQLKNLGAAVAIMEGSGTVQGVVRFLQLSSEL 112
BLAST of CN181748 vs. ExPASy Swiss-Prot
Match: CCS_MOUSE (Copper chaperone for superoxide dismutase OS=Mus musculus GN=Ccs PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.943e-12 Identity = 46/111 (41.44%), Postives = 65/111 (58.56%), Query Frame = 2 Query: 359 TSQGDQGLPELLTEYMVDMKCEGCVDAVKQKLQTVTGVKNVEVDLSNQVVRILGSSPLKTMTEALEQTGRKARLVGQGVPEDFLVSAAVAEFKG-PDVFGVVRLAQVNMEL 688 + GD G L E+ V M C+ CVDAV + L+ V GV+NV+V L NQ+V + + P + + LE TGR+A L G G + + AAVA +G + GVVR Q++ EL Sbjct: 3 SKSGDGGTVCAL-EFAVQMSCQSCVDAVHKTLKGVAGVQNVDVQLENQMVLVQTTLPSQEVQALLESTGRQAVLKGMGSSQLQNLGAAVAILEGCGSIQGVVRFLQLSSEL 112
BLAST of CN181748 vs. ExPASy Swiss-Prot
Match: CCS_HUMAN (Copper chaperone for superoxide dismutase OS=Homo sapiens GN=CCS PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.654e-12 Identity = 47/110 (42.73%), Postives = 65/110 (59.09%), Query Frame = 2 Query: 359 TSQGDQGLPELLTEYMVDMKCEGCVDAVKQKLQTVTGVKNVEVDLSNQVVRILGSSPLKTMTEALEQTGRKARLVGQGVPEDFLVSAAVAEFKGP-DVFGVVRLAQVNME 685 + G+QG L E+ V M C+ CVDAV++ LQ V GV++VEV L +Q+V + + P + + LE TGR+A L G G + + AAVA GP V GVVR Q+ E Sbjct: 3 SDSGNQGTLCTL-EFAVQMTCQSCVDAVRKSLQGVAGVQDVEVHLEDQMVLVHTTLPSQEVQALLEGTGRQAVLKGMGSGQLQNLGAAVAILGGPGTVQGVVRFLQLTPE 111
BLAST of CN181748 vs. ExPASy Swiss-Prot
Match: CCS_PIG (Copper chaperone for superoxide dismutase OS=Sus scrofa GN=CCS PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.645e-11 Identity = 42/99 (42.42%), Postives = 57/99 (57.58%), Query Frame = 2 Query: 392 LTEYMVDMKCEGCVDAVKQKLQTVTGVKNVEVDLSNQVVRILGSSPLKTMTEALEQTGRKARLVGQGVPEDFLVSAAVAEFKGP-DVFGVVRLAQVNME 685 + E+ V M C+ CVDAV + LQ V G+++VEV L NQ+V + + P + + LE TGR+A L G G + AAVA G V GVVR Q+ E Sbjct: 13 MLEFAVQMTCQSCVDAVSRSLQGVAGIQSVEVQLENQMVLVQTTLPSQVVQALLEDTGRQAVLKGMGSGRWQNLEAAVAILGGSGPVQGVVRFLQLTPE 111 The following BLAST results are available for this feature:
BLAST of CN181748 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN181748 ID=CN181748; Name=CN181748; organism=Citrus sinensis; type=EST; length=690bpback to top |