CN188704
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188704 vs. ExPASy Swiss-Prot
Match: CSLG2_ARATH (Cellulose synthase-like protein G2 OS=Arabidopsis thaliana GN=CSLG2 PE=2 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 5.158e-51 Identity = 96/173 (55.49%), Postives = 120/173 (69.36%), Query Frame = -2 Query: 143 LNTTEPIRRTALNRVFAVVYTCAIFALLYHHVETLTIRGRNPXXXXXXXXXXXXXVILALMWATTQAFRMRPIHRREFPGNLQKVVRPREFPALDVLICTADPYKEPPLSVVNTALSVMAYDYPTEKLSVYVSDDGGSALTLFAFMEAAKFAAHWLPFCRKFNLMERNPHAYF 661 L+T P RRT R++AV +TC I AL+YHHV ++ N ++LA MWATT + R+ PIHR E+P +P +FP LDV ICTADPYKEPP+ VVNTALSVMAY+YP+ K+SVYVSDDGGS+LTLFA MEAAKF+ HWLPFC+ N+ +R+P YF Sbjct: 11 LHTCHPCRRTIPYRIYAVFHTCGIIALMYHHVHSIV----NANNTLITCLLLLSDIVLAFMWATTTSLRLNPIHRTEYPEKY--AAKPEDFPKLDVFICTADPYKEPPMMVVNTALSVMAYEYPSHKISVYVSDDGGSSLTLFALMEAAKFSKHWLPFCKNNNVQDRSPEVYF 177
BLAST of CN188704 vs. ExPASy Swiss-Prot
Match: CSLG3_ARATH (Cellulose synthase-like protein G3 OS=Arabidopsis thaliana GN=CSLG3 PE=2 SV=2) HSP 1 Score: 197.593 bits (501), Expect = 5.703e-50 Identity = 95/173 (54.91%), Postives = 119/173 (68.79%), Query Frame = -2 Query: 143 LNTTEPIRRTALNRVFAVVYTCAIFALLYHHVETLTIRGRNPXXXXXXXXXXXXXVILALMWATTQAFRMRPIHRREFPGNLQKVVRPREFPALDVLICTADPYKEPPLSVVNTALSVMAYDYPTEKLSVYVSDDGGSALTLFAFMEAAKFAAHWLPFCRKFNLMERNPHAYF 661 L+T P RRT R++AV +TC I AL+YHHV +L ++LA MWATT + R +P+ R E+P P +FP LDV ICTADPYKEPP+ VVNTALSVMAY+YP++K+SVYVSDDGGS+LTLFA MEAAKF+ HWLPFC+K N+ +R+P YF Sbjct: 33 LHTCHPCRRTIPYRIYAVFHTCGIIALMYHHVHSLLTANTT----LITSLLLLSDIVLAFMWATTTSLRYKPVRRTEYPEKY--AAEPEDFPKLDVFICTADPYKEPPMMVVNTALSVMAYEYPSDKISVYVSDDGGSSLTLFALMEAAKFSKHWLPFCKKNNVQDRSPEVYF 199
BLAST of CN188704 vs. ExPASy Swiss-Prot
Match: CSLG1_ARATH (Cellulose synthase-like protein G1 OS=Arabidopsis thaliana GN=CSLG1 PE=2 SV=1) HSP 1 Score: 194.126 bits (492), Expect = 6.306e-49 Identity = 92/173 (53.18%), Postives = 118/173 (68.21%), Query Frame = -2 Query: 143 LNTTEPIRRTALNRVFAVVYTCAIFALLYHHVETLTIRGRNPXXXXXXXXXXXXXVILALMWATTQAFRMRPIHRREFPGNLQKVVRPREFPALDVLICTADPYKEPPLSVVNTALSVMAYDYPTEKLSVYVSDDGGSALTLFAFMEAAKFAAHWLPFCRKFNLMERNPHAYF 661 L+T P RRT R++A+ +TC I AL+YHHV +L ++LA MWATT + R+ P+HR E P +P +FP LDV ICTADPYKEPP+ VVNTALSVMAY+YP++K+SVYVSDDGGS+LT FA +EAAKF+ WLPFC+K N+ +R+P YF Sbjct: 14 LHTCHPCRRTIPYRIYAIFHTCGIIALMYHHVHSLVTANNT----LITCLLLLSDIVLAFMWATTTSLRLNPVHRTECPEKY--AAKPEDFPKLDVFICTADPYKEPPMMVVNTALSVMAYEYPSDKISVYVSDDGGSSLTFFALIEAAKFSKQWLPFCKKNNVQDRSPEVYF 180
BLAST of CN188704 vs. ExPASy Swiss-Prot
Match: CSLE6_ORYSJ (Cellulose synthase-like protein E6 OS=Oryza sativa subsp. japonica GN=CSLE6 PE=2 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 5.363e-32 Identity = 73/182 (40.11%), Postives = 102/182 (56.04%), Query Frame = -2 Query: 143 KSSGTEIPPLNTTEPIRRTALNRVFAVVYTCAIFALLYHHVETLTIRGRNPXXXXXXXXXXXXXVILALMWATTQAFRMRPIHRREFPGNLQKVVRPREFPALDVLICTADPYKEPPLSVVNTALSVMAYDYPTEKLSVYVSDDGGSALTLFAFMEAAKFAAHWLPFCRKFNLMERNPHAYF 688 +++ TE L TE + A+ R+ A I +LY+ + G A+ W TQ+ R P+ RR F L + + P +DV +CTADP+ EPP V++T LSVMAY+YP+EK+SVY+SDDGGS LT +A EA+ FA WLPFCR++N+ R+P AYF Sbjct: 2 ETTTTERRRLFATEKVGGRAVYRLQAATVAAGILLVLYYRATRVPAAGEGRAAWLGMAAAELW---FAVYWVITQSVRWCPVRRRTFKNRLAERYK-ENLPGVDVFVCTADPHAEPPSLVISTILSVMAYNYPSEKISVYLSDDGGSILTFYALWEASMFAKKWLPFCRRYNIEPRSPAAYF 179
BLAST of CN188704 vs. ExPASy Swiss-Prot
Match: CSLE1_ORYSJ (Cellulose synthase-like protein E1 OS=Oryza sativa subsp. japonica GN=CSLE1 PE=2 SV=2) HSP 1 Score: 137.502 bits (345), Expect = 7.004e-32 Identity = 72/174 (41.38%), Postives = 97/174 (55.75%), Query Frame = -2 Query: 143 PLNTTEPIRRTALNRVFAVVYTCAIFALLYHHVETLTIRGRNPXXXXXXXXXXXXXVILALMWATTQAFRMRPIHRREFPGNLQKVVRPREFPALDVLICTADPYKEPPLSVVNTALSVMAYDYPTEKLSVYVSDDGGSALTLFAFMEAAKFAAHWLPFCRKFNLMERNPHAYF 664 PL TTE + A+ RV A I +LY+ + G A+ W Q+ R RP RR F L + + P +D+ +CTADP EPP V++T LSVMAY+YP+EK+SVY+SDDGGS LT +A EA+ FA WLPFC+++N+ R+P AYF Sbjct: 15 PLFTTEELGGRAVYRVQAATVAAGILLVLYYRATRVPAAGEGRAAWLGMAAAELW---FAVYWVIAQSVRWRPFRRRTFRDRLAERYE-QNLPGVDIFVCTADPQSEPPSLVISTILSVMAYNYPSEKISVYLSDDGGSILTFYALWEASIFAKKWLPFCKRYNIEPRSPAAYF 184
BLAST of CN188704 vs. ExPASy Swiss-Prot
Match: CSLE2_ORYSJ (Cellulose synthase-like protein E2 OS=Oryza sativa subsp. japonica GN=CSLE2 PE=2 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.118e-29 Identity = 67/177 (37.85%), Postives = 95/177 (53.67%), Query Frame = -2 Query: 143 PPLNTTEPIRRTALN--RVFAVVYTCAIFALLYHHVETLTIRGRNPXXXXXXXXXXXXXVILALMWATTQAFRMRPIHRREFPGNLQKVVRPREFPALDVLICTADPYKEPPLSVVNTALSVMAYDYPTEKLSVYVSDDGGSALTLFAFMEAAKFAAHWLPFCRKFNLMERNPHAYF 667 PPL TE R A+ RV A + + + L G + + W T + R P++RR F L + E P++D+ +CTADP EPP+ V++T LSVMAYDY EKL++Y+SDD GS LT + EA++FA HW+PFC+K+ + R+P AYF Sbjct: 17 PPLFATEKPGRMAMAAYRVSAATVFAGVLLIWLYRATHLPPGGGDGVRRWAWLGMLAAELWFGFYWVLTLSVRWCPVYRRTFKDRLAQSYSEDELPSVDIFVCTADPTAEPPMLVISTVLSVMAYDYLPEKLNIYLSDDAGSVLTFYVLCEASEFAKHWIPFCKKYKVEPRSPAAYF 193
BLAST of CN188704 vs. ExPASy Swiss-Prot
Match: CSLE1_ARATH (Cellulose synthase-like protein E1 OS=Arabidopsis thaliana GN=CSLE1 PE=1 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.754e-28 Identity = 65/132 (49.24%), Postives = 79/132 (59.85%), Query Frame = -2 Query: 89 LMWATTQAFRMRPIHRREFPGNLQKVVRPREFPALDVLICTADPYKEPPLSVVNTALSVMAYDYPTEKLSVYVSDDGGSALTLFAFMEAAKFAAHWLPFCRKFNLMERNPHAYFXXXXXXXTHACCSEIKVY 484 L W TQ+ R P+ R F L + + P LDV +CTADP EPPL VVNT LSV A DYP EKL+VY+SDDGGS LT +A EAA+FA W+PFC+KFN+ +P AY A K+Y Sbjct: 78 LYWVVTQSSRWNPVWRFPFSDRLSRRYGS-DLPRLDVFVCTADPVIEPPLLVVNTVLSVTALDYPPEKLAVYLSDDGGSELTFYALTEAAEFAKTWVPFCKKFNVEPTSPAAYLSSKANCLDSAAEEVAKLY 208
BLAST of CN188704 vs. ExPASy Swiss-Prot
Match: CSLD5_ARATH (Cellulose synthase-like protein D5 OS=Arabidopsis thaliana GN=CSLD5 PE=2 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.083e-24 Identity = 57/124 (45.97%), Postives = 74/124 (59.68%), Query Frame = -2 Query: 143 ALMWATTQAFRMRPIHRREFPG---------NLQKVVRPREFPALDVLICTADPYKEPPLSVVNTALSVMAYDYPTEKLSVYVSDDGGSALTLFAFMEAAKFAAHWLPFCRKFNLMERNPHAYF 487 AL W Q ++ P++R G NL+ + P +DV + TADP KEPPL NT LS++A DYP EKL+ Y+SDDGG+ LT A + A FA+ W+PFCRK N+ RNP AYF Sbjct: 358 ALSWLLDQLPKLCPVNRLTDLGVLKERFESPNLRNPKGRSDLPGIDVFVSTADPEKEPPLVTANTILSILAVDYPVEKLACYLSDDGGALLTFEALAQTASFASTWVPFCRKHNIEPRNPEAYF 481
BLAST of CN188704 vs. ExPASy Swiss-Prot
Match: CSLD3_ARATH (Cellulose synthase-like protein D3 OS=Arabidopsis thaliana GN=CSLD3 PE=1 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.375e-24 Identity = 63/146 (43.15%), Postives = 80/146 (54.79%), Query Frame = -2 Query: 143 IRGRNPXXXXXXXXXXXXXVILALMWATTQAFRMRPIHRREFPGNL-QKVVRPR--------EFPALDVLICTADPYKEPPLSVVNTALSVMAYDYPTEKLSVYVSDDGGSALTLFAFMEAAKFAAHWLPFCRKFNLMERNPHAYF 553 I+ +NP + AL W Q ++ PI+R L +K P + P LD+ + TADP KEPPL NT LS++A DYP EKL+ YVSDDGG+ LT A EAA FA W+PFCRK N+ RNP +YF Sbjct: 312 IKHKNPDAIWLWGMSVVCELWFALSWLLDQLPKLCPINRATDLNVLKEKFETPTPSNPTGKSDLPGLDMFVSTADPEKEPPLVTSNTILSILAADYPVEKLACYVSDDGGALLTFEAMAEAASFANMWVPFCRKHNIEPRNPDSYF 457
BLAST of CN188704 vs. ExPASy Swiss-Prot
Match: CSLB2_ARATH (Cellulose synthase-like protein B2 OS=Arabidopsis thaliana GN=CSLB2 PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.375e-24 Identity = 62/180 (34.44%), Postives = 93/180 (51.67%), Query Frame = -2 Query: 143 SGTEIPPLNTTEPIRRTALNRVFAVVYTCAIFALLYHHVETLTIRGRNPXXXXXXXXXXXXXVILALMWATTQAFRMRPIHRREFPGNLQKVVRPREFPALDVLICTADPYKEPPLSVVNTALSVMAYDYPTEKLSVYVSDDGGSALTLFAFMEAAKFAAHWLPFCRKFNLMERNPHAYF 682 S +PPL + L V + +F+LL H + ++ G + +W + + P + +P L + R + P++D+ + TADP +EPP+ VVNT LS++A +YP KL+ YVSDDG S LT F+ EA+KFA W+PFC+K+NL R P YF Sbjct: 4 SSCSLPPLYENISYKSYILRAVDLTILGL-LFSLLLHRILYMSQNG------IIWLVAFLCESCFSFVWLLSTCTKWSPAETKPYPDRLDE--RVYDLPSVDMFVPTADPVREPPIMVVNTVLSLLAVNYPANKLACYVSDDGCSPLTYFSLKEASKFAKIWVPFCKKYNLKVRAPFRYF 174 The following BLAST results are available for this feature:
BLAST of CN188704 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 64
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188704 ID=CN188704; Name=CN188704; organism=Citrus sinensis; type=EST; length=725bpback to top |