CN188635
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188635 vs. ExPASy Swiss-Prot
Match: IF4E3_ARATH (Eukaryotic translation initiation factor 4E type 3 OS=Arabidopsis thaliana GN=At5g18110 PE=2 SV=1) HSP 1 Score: 323.168 bits (827), Expect = 9.922e-88 Identity = 151/169 (89.35%), Postives = 158/169 (93.49%), Query Frame = -3 Query: 258 TRRTPGVRTQTSYEDNIKKIVDFSTVEGFWVCYCHLARPSLLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLDYGDNICGAVLSIRFNEDILSVWNRNASDHQAVMALRDSIKRHLKLPHSYVMEYKPHDASLRDNSSYRNTWLRG 764 TRRTPGVR Q SYEDNIKK+V+FSTVEGFW CYCHLAR SLLPSPTDLH FK+GIRPLWED ANCNGGKWIIRF KVVS RFWEDL+LALVGDQLD DNICGAVLS+RFNEDI+SVWNRNASDHQAVM LRDSIKRHLKLPH+YVMEYKPHDASLRDNSSYRNTWLRG Sbjct: 54 TRRTPGVRNQ-SYEDNIKKMVEFSTVEGFWACYCHLARSSLLPSPTDLHFFKDGIRPLWEDGANCNGGKWIIRFSKVVSARFWEDLLLALVGDQLDDADNICGAVLSVRFNEDIISVWNRNASDHQAVMGLRDSIKRHLKLPHAYVMEYKPHDASLRDNSSYRNTWLRG 221
BLAST of CN188635 vs. ExPASy Swiss-Prot
Match: IF4E2_MOUSE (Eukaryotic translation initiation factor 4E type 2 OS=Mus musculus GN=Eif4e2 PE=1 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 9.395e-46 Identity = 84/158 (53.16%), Postives = 115/158 (72.78%), Query Frame = -3 Query: 294 TRRTPGVRTQT-SYEDNIKKIVDFSTVEGFWVCYCHLARPSLLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLDYGDNICGAVLSIRFNEDILSVWNRNASDHQAVMALRDSIKRHLKLPHSYVMEYKPHDASLR 764 +RRTPG T + SYE NIK+I F++VE FW Y H+ RP L +D HLFKEGI+P+WED AN NGGKWIIR +K ++ R WE+L+LA++G+Q G+ ICGAV+S+RF EDI+S+WN+ ASD +RD+++R L LP + +MEYK H S++ Sbjct: 65 SRRTPGRPTSSQSYEQNIKQIGTFASVEQFWKFYSHMVRPGDLTGHSDFHLFKEGIKPMWEDDANKNGGKWIIRLRKGLASRCWENLILAMLGEQFMVGEEICGAVVSVRFQEDIISIWNKTASDQATTARIRDTLRRVLNLPPNTIMEYKTHTDSIK 222
BLAST of CN188635 vs. ExPASy Swiss-Prot
Match: IF4E2_HUMAN (Eukaryotic translation initiation factor 4E type 2 OS=Homo sapiens GN=EIF4E2 PE=1 SV=1) HSP 1 Score: 183.341 bits (464), Expect = 1.227e-45 Identity = 84/158 (53.16%), Postives = 115/158 (72.78%), Query Frame = -3 Query: 294 TRRTPGVRTQT-SYEDNIKKIVDFSTVEGFWVCYCHLARPSLLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLDYGDNICGAVLSIRFNEDILSVWNRNASDHQAVMALRDSIKRHLKLPHSYVMEYKPHDASLR 764 +RRTPG T + SYE NIK+I F++VE FW Y H+ RP L +D HLFKEGI+P+WED AN NGGKWIIR +K ++ R WE+L+LA++G+Q G+ ICGAV+S+RF EDI+S+WN+ ASD +RD+++R L LP + +MEYK H S++ Sbjct: 65 SRRTPGRPTSSQSYEQNIKQIGTFASVEQFWRFYSHMVRPGDLTGHSDFHLFKEGIKPMWEDDANKNGGKWIIRLRKGLASRCWENLILAMLGEQFMVGEEICGAVVSVRFQEDIISIWNKTASDQATTARIRDTLRRVLNLPPNTIMEYKTHTDSIK 222
BLAST of CN188635 vs. ExPASy Swiss-Prot
Match: IF4E4_CAEEL (Eukaryotic translation initiation factor 4E-4 OS=Caenorhabditis elegans GN=ife-4 PE=2 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 1.552e-40 Identity = 76/163 (46.63%), Postives = 105/163 (64.42%), Query Frame = -3 Query: 270 RTPGVRTQTSYEDNIKKIVDFSTVEGFWVCYCHLARPSLLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLDYGDNICGAVLSIRFNEDILSVWNRNASDHQAVMALRDSIKRHLKLPHSYVMEYKPHDASLRDNSSYRNT 758 R G Y ++ + +VE FW H RP+ + D+H FK G++P+WED ANC GGKWIIR KK +S R WE+L++A++G+Q GD +CGAV SIR EDI+S+WNRNA D +R++++ L+LP + V+EYK HD LRD SSYR+T Sbjct: 44 RPTGKFDPEDYASYVQPVGIMKSVEQFWSIMVHFKRPTEMCDKADIHFFKTGVKPVWEDPANCKGGKWIIRLKKGLSTRIWENLLMAIIGEQFLVGDELCGAVCSIRNQEDIISLWNRNADDTPVTNRIRETLRSVLQLPQNTVLEYKRHDDCLRDQSSYRHT 206
BLAST of CN188635 vs. ExPASy Swiss-Prot
Match: IF4E3_CAEEL (Eukaryotic translation initiation factor 4E-3 OS=Caenorhabditis elegans GN=ife-3 PE=1 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.406e-25 Identity = 58/157 (36.94%), Postives = 96/157 (61.15%), Query Frame = -3 Query: 276 YEDNIKKIVDFSTVEGFWVCYCHLARPSLLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKK----VVSGRFWEDLVLALVGDQLD-YGDNICGAVLSIRFNEDILSVWNRNASDHQAVMALRDSIKRHLKLPHSYVMEYKPH-DASLRDNSSYR 728 +ED +K + F TVE FW Y H+ L +D +LFKEGI+P+WED N GG+W++ K + +W +L++A+VG+Q D YGD ICGAV+++R D +S+W R+A+ + + +K+ L +P + ++ Y+ H D+S R +S+ + Sbjct: 51 WEDCLKMVSLFDTVEDFWSLYNHIQSAGGLNWGSDYYLFKEGIKPMWEDVNNVQGGRWLVVVDKQRRTQLLDHYWLELLMAIVGEQFDEYGDYICGAVVNVRQKGDKVSLWTRDATRDDVNLRIGQVLKQKLSIPDTEILRYEVHKDSSARTSSTVK 207
BLAST of CN188635 vs. ExPASy Swiss-Prot
Match: IF4E_DROME (Eukaryotic translation initiation factor 4E OS=Drosophila melanogaster GN=eIF-4E PE=1 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 3.142e-25 Identity = 54/159 (33.96%), Postives = 94/159 (59.12%), Query Frame = -3 Query: 267 SYEDNIKKIVDFSTVEGFWVCYCHLARPSLLPSPTDLHLFKEGIRPLWEDSANCNGGKWII---RFKKVVSGRFWEDLVLALVGDQLDYGDNICGAVLSIRFNEDILSVWNRNASDHQAVMALRDSIKRHLKLPHSYVMEYKPH-DASLRDNSSYRNTW 731 S+ED +I F TVE FW Y H+ PS + +D LFK+ IRP+WED+AN GG+W+I + K W D++L L+G+ D+ D ICGAV++IR + +S+W + ++ +A + + ++ L+L + ++Y+ H D ++ S+ ++ + Sbjct: 99 SWEDMQNEITSFDTVEDFWSLYNHIKPPSEIKLGSDYSLFKKNIRPMWEDAANKQGGRWVITLNKSSKTDLDNLWLDVLLCLIGEAFDHSDQICGAVINIRGKSNKISIWTADGNNEEAALEIGHKLRDALRLGRNNSLQYQLHKDTMVKQGSNVKSIY 257
BLAST of CN188635 vs. ExPASy Swiss-Prot
Match: IF4E1_ARATH (Eukaryotic translation initiation factor 4E-1 OS=Arabidopsis thaliana GN=EIF4E1 PE=2 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 3.142e-25 Identity = 57/141 (40.43%), Postives = 85/141 (60.28%), Query Frame = -3 Query: 333 PGVRT-QTSYEDNIKKIVDFSTVEGFWVCYCHLARPSLLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLDYGDNICGAVLSIRFNEDILSVWNRNASDHQAVMALRDSIKRHLKLPHS 752 P V++ QTS+ +++ + FSTVE FW Y ++ PS L D + FK I P WED NGGKW + F K S + W +LAL+G+Q D+GD ICGAV++IR ++ +S+W +NAS+ A +++ K L +S Sbjct: 73 PAVKSKQTSWGSSLRPVFTFSTVEEFWSLYNNMKHPSKLAHGADFYCFKHIIEPKWEDPICANGGKWTMTFPKEKSDKSWLYTLLALIGEQFDHGDEICGAVVNIRGKQERISIWTKNASNEAAQVSIGKQWKEFLDYNNS 213
BLAST of CN188635 vs. ExPASy Swiss-Prot
Match: IF4E_BOVIN (Eukaryotic translation initiation factor 4E OS=Bos taurus GN=EIF4E PE=2 SV=2) HSP 1 Score: 112.464 bits (280), Expect = 2.660e-24 Identity = 57/162 (35.19%), Postives = 89/162 (54.94%), Query Frame = -3 Query: 264 SYEDNIKKIVDFSTVEGFWVCYCHLARPSLLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVS----GRFWEDLVLALVGDQL-DYGDNICGAVLSIRFNEDILSVWNRNASDHQAVMALRDSIKRHLKLPHSYVMEYKPH-DASLRDNSSYRNTWL 731 +++ N++ I F TVE FW Y H+ S L D LFK+GI P+WED N GG+W+I K RFW + VL L+G+ DY D++CGAV+++R D +++W + +AV + K L LP V+ Y+ H D + + S+ +N ++ Sbjct: 55 TWQANLRLISKFDTVEDFWALYNHIQLSSNLMPGCDYSLFKDGIEPMWEDEKNKRGGRWLITLNKQQRRSDLDRFWLETVLCLIGESFDDYSDDVCGAVVNVRAKGDKIAIWTTECENREAVTHIGRVYKERLGLPPKIVIGYQSHADTATKSGSTTKNRFV 216
BLAST of CN188635 vs. ExPASy Swiss-Prot
Match: IF4E_HUMAN (Eukaryotic translation initiation factor 4E OS=Homo sapiens GN=EIF4E PE=1 SV=2) HSP 1 Score: 111.309 bits (277), Expect = 5.926e-24 Identity = 56/162 (34.57%), Postives = 89/162 (54.94%), Query Frame = -3 Query: 264 SYEDNIKKIVDFSTVEGFWVCYCHLARPSLLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVS----GRFWEDLVLALVGDQL-DYGDNICGAVLSIRFNEDILSVWNRNASDHQAVMALRDSIKRHLKLPHSYVMEYKPH-DASLRDNSSYRNTWL 731 +++ N++ I F TVE FW Y H+ S L D LFK+GI P+WED N GG+W+I K RFW + +L L+G+ DY D++CGAV+++R D +++W + +AV + K L LP V+ Y+ H D + + S+ +N ++ Sbjct: 55 TWQANLRLISKFDTVEDFWALYNHIQLSSNLMPGCDYSLFKDGIEPMWEDEKNKRGGRWLITLNKQQRRSDLDRFWLETLLCLIGESFDDYSDDVCGAVVNVRAKGDKIAIWTTECENREAVTHIGRVYKERLGLPPKIVIGYQSHADTATKSGSTTKNRFV 216
BLAST of CN188635 vs. ExPASy Swiss-Prot
Match: IF4E_RAT (Eukaryotic translation initiation factor 4E OS=Rattus norvegicus GN=Eif4e PE=1 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.011e-23 Identity = 56/162 (34.57%), Postives = 88/162 (54.32%), Query Frame = -3 Query: 264 SYEDNIKKIVDFSTVEGFWVCYCHLARPSLLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVS----GRFWEDLVLALVGDQL-DYGDNICGAVLSIRFNEDILSVWNRNASDHQAVMALRDSIKRHLKLPHSYVMEYKPH-DASLRDNSSYRNTWL 731 +++ N++ I F TVE FW Y H+ S L D LFK+GI P+WED N GG+W+I K RFW + +L L+G+ DY D++CGAV+++R D +++W + AV + K L LP V+ Y+ H D + + S+ +N ++ Sbjct: 55 TWQANLRLISKFDTVEDFWALYNHIQLSSNLMPGCDYSLFKDGIEPMWEDEKNKRGGRWLITLNKQQRRSDLDRFWLETLLCLIGESFDDYSDDVCGAVVNVRAKGDKIAIWTTECENRDAVTHIGRVYKERLGLPPKIVIGYQSHADTATKSGSTTKNRFV 216 The following BLAST results are available for this feature:
BLAST of CN188635 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 43
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188635 ID=CN188635; Name=CN188635; organism=Citrus sinensis; type=EST; length=766bpback to top |